RNA–Protein interactions for RNA: ENST00000523541.1

CCNC-213, Transcript of cyclin C, humanhuman

TSL 1 (best)

Gene CCNC, Length 1,123 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-213ENST00000523541 KCND2Q9NZV8 630 aa19.07■□□□□ 0.64
CCNC-213ENST00000523541 PRKAG3Q9UGI9 489 aa19.07■□□□□ 0.64
CCNC-213ENST00000523541 CD207Q9UJ71 328 aa19.07■□□□□ 0.64
CCNC-213ENST00000523541 IPPQ9Y573 584 aa19.07■□□□□ 0.64
CCNC-213ENST00000523541 ACKR2O00590 384 aa19.06■□□□□ 0.64
CCNC-213ENST00000523541 TBX10O75333 385 aa19.06■□□□□ 0.64
CCNC-213ENST00000523541 GALTP07902 379 aa19.06■□□□□ 0.64
CCNC-213ENST00000523541 SRGAP2BP0DMP2 458 aa19.06■□□□□ 0.64
CCNC-213ENST00000523541 PDIA4P13667 645 aaKnown RBP19.06■□□□□ 0.64
CCNC-213ENST00000523541 TMEM184AQ6ZMB5 413 aa19.06■□□□□ 0.64
CCNC-213ENST00000523541 DEPTORQ8TB45 409 aa19.06■□□□□ 0.64
CCNC-213ENST00000523541 FAM193BQ96PV7 902 aaPredicted RBP19.06■□□□□ 0.64
CCNC-213ENST00000523541 MMTAG2Q9BU76 263 aaKnown RBP19.06■□□□□ 0.64
CCNC-213ENST00000523541 C1QTNF1Q9BXJ1 281 aa19.06■□□□□ 0.64
CCNC-213ENST00000523541 NRDE2Q9H7Z3 1164 aa19.06■□□□□ 0.64
CCNC-213ENST00000523541 NT5C1B-RDH14C9J2C7 533 aa19.05■□□□□ 0.64
CCNC-213ENST00000523541 SMAD4Q13485 552 aaKnown RBP19.05■□□□□ 0.64
CCNC-213ENST00000523541 DDX53Q86TM3 631 aaKnown RBP19.05■□□□□ 0.64
CCNC-213ENST00000523541 MRPL43Q8N983 215 aaKnown RBP19.05■□□□□ 0.64
CCNC-213ENST00000523541 SNX21Q969T3 373 aa19.05■□□□□ 0.64
CCNC-213ENST00000523541 IGSF21Q96ID5 467 aa19.05■□□□□ 0.64
CCNC-213ENST00000523541 CPB2Q96IY4 423 aa19.05■□□□□ 0.64
CCNC-213ENST00000523541 DRC1Q96MC2 740 aa19.05■□□□□ 0.64
CCNC-213ENST00000523541 BARX2Q9UMQ3 279 aaPredicted RBP19.05■□□□□ 0.64
CCNC-213ENST00000523541 RBM19Q9Y4C8 960 aaKnown RBP19.05■□□□□ 0.64
CCNC-213ENST00000523541 IRAK3Q9Y616 596 aa19.05■□□□□ 0.64
CCNC-213ENST00000523541 VWA3AA6NCI4 1184 aa19.04■□□□□ 0.64
CCNC-213ENST00000523541 MEIS3P2A8K0S8 358 aa19.04■□□□□ 0.64
CCNC-213ENST00000523541 K7ELQ4 463 aaPredicted RBP19.04■□□□□ 0.64
CCNC-213ENST00000523541 N4BP3O15049 544 aa19.04■□□□□ 0.64
CCNC-213ENST00000523541 MBTPS2O43462 519 aa19.04■□□□□ 0.64
CCNC-213ENST00000523541 NR1I2O75469 434 aa19.04■□□□□ 0.64
CCNC-213ENST00000523541 GUCY2CP25092 1073 aa19.04■□□□□ 0.64
CCNC-213ENST00000523541 LONP1P36776 959 aaKnown RBP19.04■□□□□ 0.64
CCNC-213ENST00000523541 COASYQ13057 564 aa19.04■□□□□ 0.64
CCNC-213ENST00000523541 PRPF4BQ13523 1007 aaKnown RBP19.04■□□□□ 0.64
CCNC-213ENST00000523541 SMC1AQ14683 1233 aaKnown RBP19.04■□□□□ 0.64
CCNC-213ENST00000523541 DUSP6Q16828 381 aa19.04■□□□□ 0.64
CCNC-213ENST00000523541 TMEM132AQ24JP5 1023 aa19.04■□□□□ 0.64
CCNC-213ENST00000523541 RINT1Q6NUQ1 792 aa19.04■□□□□ 0.64
CCNC-213ENST00000523541 LLGL2Q6P1M3 1020 aa19.04■□□□□ 0.64
CCNC-213ENST00000523541 APBB1IPQ7Z5R6 666 aaPredicted RBP19.04■□□□□ 0.64
CCNC-213ENST00000523541 SYT2Q8N9I0 419 aaPredicted RBP19.04■□□□□ 0.64
CCNC-213ENST00000523541 CDK5RAP3Q96JB5 506 aa19.04■□□□□ 0.64
CCNC-213ENST00000523541 NTPCRQ9BSD7 190 aaKnown RBP19.04■□□□□ 0.64
CCNC-213ENST00000523541 EIF2AQ9BY44 585 aaKnown RBP19.04■□□□□ 0.64
CCNC-213ENST00000523541 ARL5CA6NH57 179 aa19.03■□□□□ 0.64
CCNC-213ENST00000523541 PP2D1A8MPX8 630 aa19.03■□□□□ 0.64
CCNC-213ENST00000523541 E9PMD0 336 aa19.03■□□□□ 0.64
CCNC-213ENST00000523541 CDC25AP30304 524 aa19.03■□□□□ 0.64
CCNC-213ENST00000523541 UBA7P41226 1012 aa19.03■□□□□ 0.64
CCNC-213ENST00000523541 C1orf186Q6ZWK4 172 aa19.03■□□□□ 0.64
CCNC-213ENST00000523541 BSNDQ8WZ55 320 aa19.03■□□□□ 0.64
CCNC-213ENST00000523541 MSLNLQ96KJ4 702 aa19.03■□□□□ 0.64
CCNC-213ENST00000523541 POP1Q99575 1024 aaKnown RBP19.03■□□□□ 0.64
CCNC-213ENST00000523541 ADPGKQ9BRR6 497 aa19.03■□□□□ 0.64
CCNC-213ENST00000523541 APOL6Q9BWW8 343 aa19.03■□□□□ 0.64
CCNC-213ENST00000523541 CCDC113Q9H0I3 377 aa19.03■□□□□ 0.64
CCNC-213ENST00000523541 TMEM134Q9H6X4 195 aa19.03■□□□□ 0.64
CCNC-213ENST00000523541 FAN1Q9Y2M0 1017 aa19.03■□□□□ 0.64
CCNC-213ENST00000523541 VPS37CA5D8V6 355 aaPredicted RBP19.02■□□□□ 0.64
CCNC-213ENST00000523541 K7ERI5 159 aa19.02■□□□□ 0.64
CCNC-213ENST00000523541 B4GALT5O43286 388 aa19.02■□□□□ 0.64
CCNC-213ENST00000523541 PRKCBP05771 671 aa19.02■□□□□ 0.64
CCNC-213ENST00000523541 SYT1P21579 422 aa19.02■□□□□ 0.64
CCNC-213ENST00000523541 SCP2P22307 547 aa19.02■□□□□ 0.64
CCNC-213ENST00000523541 SMAD2Q15796 467 aaKnown RBP19.02■□□□□ 0.64
CCNC-213ENST00000523541 ZNF280BQ86YH2 543 aa19.02■□□□□ 0.64
CCNC-213ENST00000523541 CALML4Q96GE6 196 aa19.02■□□□□ 0.64
CCNC-213ENST00000523541 RNF39Q9H2S5 420 aa19.02■□□□□ 0.64
CCNC-213ENST00000523541 ZSCAN16Q9H4T2 348 aaPredicted RBP19.02■□□□□ 0.64
CCNC-213ENST00000523541 EPHX3Q9H6B9 360 aa19.02■□□□□ 0.64
CCNC-213ENST00000523541 CD320Q9NPF0 282 aa19.02■□□□□ 0.64
CCNC-213ENST00000523541 SSX2IPQ9Y2D8 614 aa19.02■□□□□ 0.64
CCNC-213ENST00000523541 MORC2Q9Y6X9 1032 aaPredicted RBP19.02■□□□□ 0.64
CCNC-213ENST00000523541 DDHD2O94830 711 aa19.01■□□□□ 0.63
CCNC-213ENST00000523541 CXCL14O95715 111 aa19.01■□□□□ 0.63
CCNC-213ENST00000523541 CTSAP10619 480 aa19.01■□□□□ 0.63
CCNC-213ENST00000523541 HOXB8P17481 243 aaPredicted RBP19.01■□□□□ 0.63
CCNC-213ENST00000523541 LIG1P18858 919 aa19.01■□□□□ 0.63
CCNC-213ENST00000523541 SLC11A1P49279 550 aa19.01■□□□□ 0.63
CCNC-213ENST00000523541 DMP1Q13316 513 aaPredicted RBP19.01■□□□□ 0.63
CCNC-213ENST00000523541 KCNC3Q14003 757 aa19.01■□□□□ 0.63
CCNC-213ENST00000523541 SF3A1Q15459 793 aaKnown RBP19.01■□□□□ 0.63
CCNC-213ENST00000523541 CABP7Q86V35 215 aa19.01■□□□□ 0.63
CCNC-213ENST00000523541 ADHFE1Q8IWW8 467 aa19.01■□□□□ 0.63
CCNC-213ENST00000523541 VPS52Q8N1B4 723 aa19.01■□□□□ 0.63
CCNC-213ENST00000523541 GAD1Q99259 594 aa19.01■□□□□ 0.63
CCNC-213ENST00000523541 CLEC1BQ9P126 229 aa19.01■□□□□ 0.63
CCNC-213ENST00000523541 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19■□□□□ 0.63
CCNC-213ENST00000523541 C2orf71A6NGG8 1288 aa19■□□□□ 0.63
CCNC-213ENST00000523541 HIDE1A8MVS5 230 aa19■□□□□ 0.63
CCNC-213ENST00000523541 NRP1O14786 923 aa19■□□□□ 0.63
CCNC-213ENST00000523541 HIP1RO75146 1068 aa19■□□□□ 0.63
CCNC-213ENST00000523541 NPTXRO95502 500 aa19■□□□□ 0.63
CCNC-213ENST00000523541 POMCP01189 267 aa19■□□□□ 0.63
CCNC-213ENST00000523541 COL9A1P20849 921 aa19■□□□□ 0.63
CCNC-213ENST00000523541 NPTX2P47972 431 aa19■□□□□ 0.63
CCNC-213ENST00000523541 SMTNP53814 917 aa19■□□□□ 0.63
CCNC-213ENST00000523541 RBM10P98175 930 aaKnown RBP19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms