RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 IPPQ9Y573 584 aa17.19■□□□□ 0.34
MRPS28-209ENST00000522987 DOCK8Q8NF50 2099 aa17.19■□□□□ 0.34
MRPS28-209ENST00000522987 TBX3O15119 743 aa17.18■□□□□ 0.34
MRPS28-209ENST00000522987 B4GALT5O43286 388 aa17.18■□□□□ 0.34
MRPS28-209ENST00000522987 JAK2O60674 1132 aa17.18■□□□□ 0.34
MRPS28-209ENST00000522987 SLITRK3O94933 977 aa17.18■□□□□ 0.34
MRPS28-209ENST00000522987 ALDH2P05091 517 aa17.18■□□□□ 0.34
MRPS28-209ENST00000522987 SPATA31D3P0C874 917 aa17.18■□□□□ 0.34
MRPS28-209ENST00000522987 NCLP19338 710 aaKnown RBP17.18■□□□□ 0.34
MRPS28-209ENST00000522987 TXKP42681 527 aa17.18■□□□□ 0.34
MRPS28-209ENST00000522987 SCNN1GP51170 649 aa17.18■□□□□ 0.34
MRPS28-209ENST00000522987 CAPSQ13938 189 aa17.18■□□□□ 0.34
MRPS28-209ENST00000522987 CALCRLQ16602 461 aa17.18■□□□□ 0.34
MRPS28-209ENST00000522987 ME3Q16798 604 aa17.18■□□□□ 0.34
MRPS28-209ENST00000522987 SPATA31D4Q6ZUB0 917 aa17.18■□□□□ 0.34
MRPS28-209ENST00000522987 PIGOQ8TEQ8 1089 aa17.18■□□□□ 0.34
MRPS28-209ENST00000522987 ATOH1Q92858 354 aaPredicted RBP17.18■□□□□ 0.34
MRPS28-209ENST00000522987 CCDC43Q96MW1 224 aaKnown RBP17.18■□□□□ 0.34
MRPS28-209ENST00000522987 EMILIN2Q9BXX0 1053 aa17.18■□□□□ 0.34
MRPS28-209ENST00000522987 NXF3Q9H4D5 531 aaKnown RBP17.18■□□□□ 0.34
MRPS28-209ENST00000522987 KLK14Q9P0G3 267 aa17.18■□□□□ 0.34
MRPS28-209ENST00000522987 CACNG4Q9UBN1 327 aa17.18■□□□□ 0.34
MRPS28-209ENST00000522987 IRAK3Q9Y616 596 aa17.18■□□□□ 0.34
MRPS28-209ENST00000522987 BTBD18B2RXH4 712 aa17.17■□□□□ 0.34
MRPS28-209ENST00000522987 USO1O60763 962 aaKnown RBP17.17■□□□□ 0.34
MRPS28-209ENST00000522987 AKAP5P24588 427 aa17.17■□□□□ 0.34
MRPS28-209ENST00000522987 CLCN4P51793 760 aa17.17■□□□□ 0.34
MRPS28-209ENST00000522987 GUCY1B3Q02153 619 aa17.17■□□□□ 0.34
MRPS28-209ENST00000522987 GIT2Q14161 759 aa17.17■□□□□ 0.34
MRPS28-209ENST00000522987 SLFN12Q8IYM2 578 aa17.17■□□□□ 0.34
MRPS28-209ENST00000522987 TNFRSF25Q93038 417 aa17.17■□□□□ 0.34
MRPS28-209ENST00000522987 NAP1L4Q99733 375 aaKnown RBP17.17■□□□□ 0.34
MRPS28-209ENST00000522987 TTC12Q9H892 705 aaPredicted RBP17.17■□□□□ 0.34
MRPS28-209ENST00000522987 SFXN1Q9H9B4 322 aa17.17■□□□□ 0.34
MRPS28-209ENST00000522987 BRMS1Q9HCU9 246 aa17.17■□□□□ 0.34
MRPS28-209ENST00000522987 MRPL17Q9NRX2 175 aaKnown RBP17.17■□□□□ 0.34
MRPS28-209ENST00000522987 PCDHA12Q9UN75 941 aa17.17■□□□□ 0.34
MRPS28-209ENST00000522987 CNTNAP2Q9UHC6 1331 aa17.17■□□□□ 0.34
MRPS28-209ENST00000522987 ARL5CA6NH57 179 aa17.16■□□□□ 0.34
MRPS28-209ENST00000522987 POTEMA6NI47 508 aa17.16■□□□□ 0.34
MRPS28-209ENST00000522987 ASAP2O43150 1006 aa17.16■□□□□ 0.34
MRPS28-209ENST00000522987 NPTXRO95502 500 aa17.16■□□□□ 0.34
MRPS28-209ENST00000522987 URODP06132 367 aa17.16■□□□□ 0.34
MRPS28-209ENST00000522987 PTENP60484 403 aa17.16■□□□□ 0.34
MRPS28-209ENST00000522987 NOTUMQ6P988 496 aa17.16■□□□□ 0.34
MRPS28-209ENST00000522987 GPR149Q86SP6 731 aa17.16■□□□□ 0.34
MRPS28-209ENST00000522987 EXOC8Q8IYI6 725 aa17.16■□□□□ 0.34
MRPS28-209ENST00000522987 COLGALT2Q8IYK4 626 aa17.16■□□□□ 0.34
MRPS28-209ENST00000522987 TMEM105Q8N8V8 129 aa17.16■□□□□ 0.34
MRPS28-209ENST00000522987 ST13P5Q8NFI4 369 aaPredicted RBP17.16■□□□□ 0.34
MRPS28-209ENST00000522987 WASF1Q92558 559 aa17.16■□□□□ 0.34
MRPS28-209ENST00000522987 TMEM175Q9BSA9 504 aa17.16■□□□□ 0.34
MRPS28-209ENST00000522987 TRIM6Q9C030 488 aaPredicted RBP17.16■□□□□ 0.34
MRPS28-209ENST00000522987 POLR3FQ9H1D9 316 aaPredicted RBP17.16■□□□□ 0.34
MRPS28-209ENST00000522987 GPRC5CQ9NQ84 441 aa17.16■□□□□ 0.34
MRPS28-209ENST00000522987 MAN1C1Q9NR34 630 aa17.16■□□□□ 0.34
MRPS28-209ENST00000522987 KANSL3Q9P2N6 904 aa17.16■□□□□ 0.34
MRPS28-209ENST00000522987 CACNA1HO95180 2353 aa17.15■□□□□ 0.34
MRPS28-209ENST00000522987 GAS2O43903 313 aaKnown RBP17.15■□□□□ 0.34
MRPS28-209ENST00000522987 LILRB3O75022 631 aa17.15■□□□□ 0.34
MRPS28-209ENST00000522987 SOD2P04179 222 aa17.15■□□□□ 0.34
MRPS28-209ENST00000522987 ARF4P18085 180 aaPredicted RBP17.15■□□□□ 0.34
MRPS28-209ENST00000522987 GLRA2P23416 452 aa17.15■□□□□ 0.34
MRPS28-209ENST00000522987 MBTD1Q05BQ5 628 aa17.15■□□□□ 0.34
MRPS28-209ENST00000522987 TFDP1Q14186 410 aa17.15■□□□□ 0.34
MRPS28-209ENST00000522987 CCDC149Q6ZUS6 474 aa17.15■□□□□ 0.34
MRPS28-209ENST00000522987 PPFIBP1Q86W92 1011 aa17.15■□□□□ 0.34
MRPS28-209ENST00000522987 PALB2Q86YC2 1186 aa17.15■□□□□ 0.34
MRPS28-209ENST00000522987 DIS3L2Q8IYB7 885 aaKnown RBP17.15■□□□□ 0.34
MRPS28-209ENST00000522987 UBALD2Q8IYN6 164 aa17.15■□□□□ 0.34
MRPS28-209ENST00000522987 ZDHHC14Q8IZN3 488 aa17.15■□□□□ 0.34
MRPS28-209ENST00000522987 NSUN7Q8NE18 718 aaKnown RBP17.15■□□□□ 0.34
MRPS28-209ENST00000522987 FLCNQ8NFG4 579 aa17.15■□□□□ 0.34
MRPS28-209ENST00000522987 RSPH1Q8WYR4 309 aa17.15■□□□□ 0.34
MRPS28-209ENST00000522987 GTF3C6Q969F1 213 aa17.15■□□□□ 0.34
MRPS28-209ENST00000522987 HERC2P3Q9BVR0 1158 aa17.15■□□□□ 0.34
MRPS28-209ENST00000522987 CSRNP2Q9H175 543 aa17.15■□□□□ 0.34
MRPS28-209ENST00000522987 MFSD1Q9H3U5 465 aa17.15■□□□□ 0.34
MRPS28-209ENST00000522987 USP20Q9Y2K6 914 aa17.15■□□□□ 0.34
MRPS28-209ENST00000522987 PPME1Q9Y570 386 aa17.15■□□□□ 0.34
MRPS28-209ENST00000522987 VWA8A3KMH1 1905 aa17.14■□□□□ 0.33
MRPS28-209ENST00000522987 LRRIQ4A6NIV6 560 aa17.14■□□□□ 0.33
MRPS28-209ENST00000522987 TEX28O15482 410 aa17.14■□□□□ 0.33
MRPS28-209ENST00000522987 NEMFO60524 1076 aa17.14■□□□□ 0.33
MRPS28-209ENST00000522987 RFPL2O75678 378 aa17.14■□□□□ 0.33
MRPS28-209ENST00000522987 GLUD2P49448 558 aa17.14■□□□□ 0.33
MRPS28-209ENST00000522987 MXD4Q14582 209 aaPredicted RBP17.14■□□□□ 0.33
MRPS28-209ENST00000522987 AMHR2Q16671 573 aa17.14■□□□□ 0.33
MRPS28-209ENST00000522987 RPS6KC1Q96S38 1066 aa17.14■□□□□ 0.33
MRPS28-209ENST00000522987 PRRX2Q99811 253 aa17.14■□□□□ 0.33
MRPS28-209ENST00000522987 HSD17B14Q9BPX1 270 aa17.14■□□□□ 0.33
MRPS28-209ENST00000522987 TMEM60Q9H2L4 133 aa17.14■□□□□ 0.33
MRPS28-209ENST00000522987 PARP2Q9UGN5 583 aa17.14■□□□□ 0.33
MRPS28-209ENST00000522987 CCDC195A0A1B0GUA6 201 aa17.13■□□□□ 0.33
MRPS28-209ENST00000522987 CARNS1A5YM72 827 aa17.13■□□□□ 0.33
MRPS28-209ENST00000522987 NEFLP07196 543 aa17.13■□□□□ 0.33
MRPS28-209ENST00000522987 RPL17P18621 184 aaKnown RBP17.13■□□□□ 0.33
MRPS28-209ENST00000522987 LIG1P18858 919 aa17.13■□□□□ 0.33
MRPS28-209ENST00000522987 GBP2P32456 591 aaPredicted RBP17.13■□□□□ 0.33
MRPS28-209ENST00000522987 MCM7P33993 719 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms