RNA–Protein interactions for RNA: ENST00000522539.1

BRF2-204, Transcript of BRF2, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 4

Gene BRF2, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2-204ENST00000522539 FAM177A1Q8N128 213 aaPredicted RBP13.76□□□□□ -0.21
BRF2-204ENST00000522539 ZNF579Q8NAF0 562 aaKnown RBP13.76□□□□□ -0.21
BRF2-204ENST00000522539 CNNM3Q8NE01 707 aa13.76□□□□□ -0.21
BRF2-204ENST00000522539 PRPF31Q8WWY3 499 aaKnown RBP13.76□□□□□ -0.21
BRF2-204ENST00000522539 SLC7A3Q8WY07 619 aa13.76□□□□□ -0.21
BRF2-204ENST00000522539 RMDN1Q96DB5 314 aa13.76□□□□□ -0.21
BRF2-204ENST00000522539 FAM193BQ96PV7 902 aaPredicted RBP13.76□□□□□ -0.21
BRF2-204ENST00000522539 PLEKHA4Q9H4M7 779 aa13.76□□□□□ -0.21
BRF2-204ENST00000522539 TBC1D17Q9HA65 648 aa13.76□□□□□ -0.21
BRF2-204ENST00000522539 KCNMB3Q9NPA1 279 aa13.76□□□□□ -0.21
BRF2-204ENST00000522539 UBN1Q9NPG3 1134 aa13.76□□□□□ -0.21
BRF2-204ENST00000522539 WRAP73Q9P2S5 460 aaPredicted RBP13.76□□□□□ -0.21
BRF2-204ENST00000522539 VAV3Q9UKW4 847 aa13.76□□□□□ -0.21
BRF2-204ENST00000522539 SNX14Q9Y5W7 946 aa13.76□□□□□ -0.21
BRF2-204ENST00000522539 FANCMQ8IYD8 2048 aa13.76□□□□□ -0.21
BRF2-204ENST00000522539 C2CD2LO14523 706 aa13.75□□□□□ -0.21
BRF2-204ENST00000522539 RPS6KB1P23443 525 aa13.75□□□□□ -0.21
BRF2-204ENST00000522539 GBP2P32456 591 aaPredicted RBP13.75□□□□□ -0.21
BRF2-204ENST00000522539 HSPA4P34932 840 aa13.75□□□□□ -0.21
BRF2-204ENST00000522539 QARSP47897 775 aaKnown RBP13.75□□□□□ -0.21
BRF2-204ENST00000522539 GLUD2P49448 558 aa13.75□□□□□ -0.21
BRF2-204ENST00000522539 AK2P54819 239 aa13.75□□□□□ -0.21
BRF2-204ENST00000522539 NLRP5P59047 1200 aa13.75□□□□□ -0.21
BRF2-204ENST00000522539 LAMTOR4Q0VGL1 99 aa13.75□□□□□ -0.21
BRF2-204ENST00000522539 LILRA6Q6PI73 481 aa13.75□□□□□ -0.21
BRF2-204ENST00000522539 ELMSAN1Q6PJG2 1045 aa13.75□□□□□ -0.21
BRF2-204ENST00000522539 BLOC1S2Q6QNY1 142 aa13.75□□□□□ -0.21
BRF2-204ENST00000522539 PSPC1Q8WXF1 523 aaKnown RBP13.75□□□□□ -0.21
BRF2-204ENST00000522539 JAKMIP1Q96N16 626 aaKnown RBP13.75□□□□□ -0.21
BRF2-204ENST00000522539 RNF39Q9H2S5 420 aa13.75□□□□□ -0.21
BRF2-204ENST00000522539 SLC2A4RGQ9NR83 387 aa13.75□□□□□ -0.21
BRF2-204ENST00000522539 ZDHHC7Q9NXF8 308 aa13.75□□□□□ -0.21
BRF2-204ENST00000522539 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.75□□□□□ -0.21
BRF2-204ENST00000522539 IPPQ9Y573 584 aa13.75□□□□□ -0.21
BRF2-204ENST00000522539 ARL5CA6NH57 179 aa13.74□□□□□ -0.21
BRF2-204ENST00000522539 SLC37A4O43826 429 aa13.74□□□□□ -0.21
BRF2-204ENST00000522539 GAS2O43903 313 aaKnown RBP13.74□□□□□ -0.21
BRF2-204ENST00000522539 P4HBP07237 508 aaKnown RBP13.74□□□□□ -0.21
BRF2-204ENST00000522539 LAMP2P13473 410 aa13.74□□□□□ -0.21
BRF2-204ENST00000522539 RFC5P40937 340 aa13.74□□□□□ -0.21
BRF2-204ENST00000522539 HTR4Q13639 388 aa13.74□□□□□ -0.21
BRF2-204ENST00000522539 GALNT17Q6IS24 598 aa13.74□□□□□ -0.21
BRF2-204ENST00000522539 FERMT3Q86UX7 667 aa13.74□□□□□ -0.21
BRF2-204ENST00000522539 C4orf19Q8IY42 314 aa13.74□□□□□ -0.21
BRF2-204ENST00000522539 BLIDQ8IZY5 108 aa13.74□□□□□ -0.21
BRF2-204ENST00000522539 GSTCDQ8NEC7 633 aa13.74□□□□□ -0.21
BRF2-204ENST00000522539 GPR152Q8TDT2 470 aa13.74□□□□□ -0.21
BRF2-204ENST00000522539 SMG7Q92540 1137 aaKnown RBP13.74□□□□□ -0.21
BRF2-204ENST00000522539 TMEM143Q96AN5 459 aa13.74□□□□□ -0.21
BRF2-204ENST00000522539 CCDC51Q96ER9 411 aa13.74□□□□□ -0.21
BRF2-204ENST00000522539 FAM20AQ96MK3 541 aa13.74□□□□□ -0.21
BRF2-204ENST00000522539 NT5C3AQ9H0P0 336 aa13.74□□□□□ -0.21
BRF2-204ENST00000522539 NCOA5Q9HCD5 579 aaKnown RBP13.74□□□□□ -0.21
BRF2-204ENST00000522539 MIOSQ9NXC5 875 aa13.74□□□□□ -0.21
BRF2-204ENST00000522539 FNIP2Q9P278 1114 aa13.74□□□□□ -0.21
BRF2-204ENST00000522539 DDX25Q9UHL0 483 aaKnown RBP13.74□□□□□ -0.21
BRF2-204ENST00000522539 CA14Q9ULX7 337 aa13.74□□□□□ -0.21
BRF2-204ENST00000522539 PRG3Q9Y2Y8 225 aaPredicted RBP13.74□□□□□ -0.21
BRF2-204ENST00000522539 R4GN57 208 aa13.74□□□□□ -0.21
BRF2-204ENST00000522539 CEP250Q9BV73 2442 aa13.74□□□□□ -0.21
BRF2-204ENST00000522539 MTCL1Q9Y4B5 1905 aaKnown RBP13.73□□□□□ -0.21
BRF2-204ENST00000522539 F8W810 466 aa13.73□□□□□ -0.21
BRF2-204ENST00000522539 ASAP2O43150 1006 aa13.73□□□□□ -0.21
BRF2-204ENST00000522539 TGM5O43548 720 aa13.73□□□□□ -0.21
BRF2-204ENST00000522539 TSPAN1O60635 241 aa13.73□□□□□ -0.21
BRF2-204ENST00000522539 DKC1O60832 514 aaKnown RBP eCLIP13.73□□□□□ -0.21
BRF2-204ENST00000522539 CDC45O75419 566 aa13.73□□□□□ -0.21
BRF2-204ENST00000522539 SP9P0CG40 484 aa13.73□□□□□ -0.21
BRF2-204ENST00000522539 SRGAP2CP0DJJ0 459 aa13.73□□□□□ -0.21
BRF2-204ENST00000522539 ITGA4P13612 1032 aa13.73□□□□□ -0.21
BRF2-204ENST00000522539 AXLP30530 894 aa13.73□□□□□ -0.21
BRF2-204ENST00000522539 OR1G1P47890 313 aa13.73□□□□□ -0.21
BRF2-204ENST00000522539 PTENP60484 403 aa13.73□□□□□ -0.21
BRF2-204ENST00000522539 PPP4R3AQ6IN85 833 aa13.73□□□□□ -0.21
BRF2-204ENST00000522539 IFNLR1Q8IU57 520 aaPredicted RBP13.73□□□□□ -0.21
BRF2-204ENST00000522539 C1orf210Q8IVY1 113 aa13.73□□□□□ -0.21
BRF2-204ENST00000522539 RNF149Q8NC42 400 aa13.73□□□□□ -0.21
BRF2-204ENST00000522539 TCP11Q8WWU5 503 aa13.73□□□□□ -0.21
BRF2-204ENST00000522539 CEP170P1Q96L14 293 aa13.73□□□□□ -0.21
BRF2-204ENST00000522539 GAD1Q99259 594 aa13.73□□□□□ -0.21
BRF2-204ENST00000522539 EIF2AQ9BY44 585 aaKnown RBP13.73□□□□□ -0.21
BRF2-204ENST00000522539 PRKD2Q9BZL6 878 aa13.73□□□□□ -0.21
BRF2-204ENST00000522539 ARHGEF3Q9NR81 526 aa13.73□□□□□ -0.21
BRF2-204ENST00000522539 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.73□□□□□ -0.21
BRF2-204ENST00000522539 SIT1Q9Y3P8 196 aa13.73□□□□□ -0.21
BRF2-204ENST00000522539 GPR179Q6PRD1 2367 aa13.73□□□□□ -0.21
BRF2-204ENST00000522539 FRYLO94915 3013 aa13.72□□□□□ -0.21
BRF2-204ENST00000522539 ZMYM2Q9UBW7 1377 aa13.72□□□□□ -0.21
BRF2-204ENST00000522539 MED19A0JLT2 244 aaPredicted RBP13.72□□□□□ -0.21
BRF2-204ENST00000522539 DEXIO95424 95 aa13.72□□□□□ -0.21
BRF2-204ENST00000522539 GLULP15104 373 aa13.72□□□□□ -0.21
BRF2-204ENST00000522539 YWHABP31946 246 aaKnown RBP13.72□□□□□ -0.21
BRF2-204ENST00000522539 MLH1P40692 756 aa13.72□□□□□ -0.21
BRF2-204ENST00000522539 SCNN1GP51170 649 aa13.72□□□□□ -0.21
BRF2-204ENST00000522539 STARD6P59095 220 aa13.72□□□□□ -0.21
BRF2-204ENST00000522539 CCT2P78371 535 aaKnown RBP13.72□□□□□ -0.21
BRF2-204ENST00000522539 POU5F1BQ06416 359 aa13.72□□□□□ -0.21
BRF2-204ENST00000522539 EMC2Q15006 297 aa13.72□□□□□ -0.21
BRF2-204ENST00000522539 AMHR2Q16671 573 aa13.72□□□□□ -0.21
BRF2-204ENST00000522539 ZC3H14Q6PJT7 736 aaKnown RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms