RNA–Protein interactions for RNA: ENST00000521941.1

CTNNA1-231, Transcript of catenin alpha 1, human

TSL 3

Gene CTNNA1, Length 224 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-231	ENST00000521941		K7ENM7	598 aa		9.21	□□□□□ -0.94
CTNNA1-231	ENST00000521941		K7ERI5	159 aa		9.21	□□□□□ -0.94
CTNNA1-231	ENST00000521941	SLC26A4	O43511	780 aa		9.21	□□□□□ -0.94
CTNNA1-231	ENST00000521941	ZNF623	O75123	536 aa		9.21	□□□□□ -0.94
CTNNA1-231	ENST00000521941	TBCA	O75347	108 aa	Known RBP	9.21	□□□□□ -0.94
CTNNA1-231	ENST00000521941	OFD1	O75665	1012 aa		9.21	□□□□□ -0.94
CTNNA1-231	ENST00000521941	FGF18	O76093	207 aa		9.21	□□□□□ -0.94
CTNNA1-231	ENST00000521941	PDIA4	P13667	645 aa	Known RBP	9.21	□□□□□ -0.94
CTNNA1-231	ENST00000521941	PLS3	P13797	630 aa		9.21	□□□□□ -0.94
CTNNA1-231	ENST00000521941	DNAJB1	P25685	340 aa		9.21	□□□□□ -0.94
CTNNA1-231	ENST00000521941	ME1	P48163	572 aa		9.21	□□□□□ -0.94
CTNNA1-231	ENST00000521941	SCNN1G	P51170	649 aa		9.21	□□□□□ -0.94
CTNNA1-231	ENST00000521941	AFF1	P51825	1210 aa	Known RBP	9.21	□□□□□ -0.94
CTNNA1-231	ENST00000521941	PCBP1	Q15365	356 aa	Known RBP eCLIP	9.21	□□□□□ -0.94
CTNNA1-231	ENST00000521941	FAM187B	Q17R55	369 aa		9.21	□□□□□ -0.94
CTNNA1-231	ENST00000521941	ZNF568	Q3ZCX4	644 aa		9.21	□□□□□ -0.94
CTNNA1-231	ENST00000521941	TIGD5	Q53EQ6	642 aa		9.21	□□□□□ -0.94
CTNNA1-231	ENST00000521941	ARSH	Q5FYA8	562 aa		9.21	□□□□□ -0.94
CTNNA1-231	ENST00000521941	ATF7IP2	Q5U623	682 aa		9.21	□□□□□ -0.94
CTNNA1-231	ENST00000521941	EEF1DP3	Q658K8	133 aa		9.21	□□□□□ -0.94
CTNNA1-231	ENST00000521941	KCNT2	Q6UVM3	1135 aa		9.21	□□□□□ -0.94
CTNNA1-231	ENST00000521941	HACE1	Q8IYU2	909 aa		9.21	□□□□□ -0.94
CTNNA1-231	ENST00000521941	POF1B	Q8WVV4	589 aa		9.21	□□□□□ -0.94
CTNNA1-231	ENST00000521941	BICD1	Q96G01	975 aa		9.21	□□□□□ -0.94
CTNNA1-231	ENST00000521941	ZFP42	Q96MM3	310 aa		9.21	□□□□□ -0.94
CTNNA1-231	ENST00000521941	FAM193B	Q96PV7	902 aa	Predicted RBP	9.21	□□□□□ -0.94
CTNNA1-231	ENST00000521941	RPS6KC1	Q96S38	1066 aa		9.21	□□□□□ -0.94
CTNNA1-231	ENST00000521941	GAD1	Q99259	594 aa		9.21	□□□□□ -0.94
CTNNA1-231	ENST00000521941	TIPIN	Q9BVW5	301 aa		9.21	□□□□□ -0.94
CTNNA1-231	ENST00000521941	TRAIP	Q9BWF2	469 aa		9.21	□□□□□ -0.94
CTNNA1-231	ENST00000521941	PLVAP	Q9BX97	442 aa		9.21	□□□□□ -0.94
CTNNA1-231	ENST00000521941	RNF39	Q9H2S5	420 aa		9.21	□□□□□ -0.94
CTNNA1-231	ENST00000521941	FZD8	Q9H461	694 aa		9.21	□□□□□ -0.94
CTNNA1-231	ENST00000521941	TBC1D13	Q9NVG8	400 aa		9.21	□□□□□ -0.94
CTNNA1-231	ENST00000521941	KLK14	Q9P0G3	267 aa		9.21	□□□□□ -0.94
CTNNA1-231	ENST00000521941	THEG	Q9P2T0	379 aa		9.21	□□□□□ -0.94
CTNNA1-231	ENST00000521941	DNAJB4	Q9UDY4	337 aa		9.21	□□□□□ -0.94
CTNNA1-231	ENST00000521941	STK17A	Q9UEE5	414 aa		9.21	□□□□□ -0.94
CTNNA1-231	ENST00000521941	PLAGL2	Q9UPG8	496 aa		9.21	□□□□□ -0.94
CTNNA1-231	ENST00000521941	GDA	Q9Y2T3	454 aa		9.21	□□□□□ -0.94
CTNNA1-231	ENST00000521941	PCDHGC5	Q9Y5F6	944 aa		9.21	□□□□□ -0.94
CTNNA1-231	ENST00000521941	TCHH	Q07283	1943 aa		9.21	□□□□□ -0.94
CTNNA1-231	ENST00000521941	PRUNE2	Q8WUY3	3088 aa		9.2	□□□□□ -0.94
CTNNA1-231	ENST00000521941	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	9.2	□□□□□ -0.94
CTNNA1-231	ENST00000521941		A0A1B0GUA9	196 aa		9.2	□□□□□ -0.94
CTNNA1-231	ENST00000521941	ACKR2	O00590	384 aa		9.2	□□□□□ -0.94
CTNNA1-231	ENST00000521941	B4GALT3	O60512	393 aa		9.2	□□□□□ -0.94
CTNNA1-231	ENST00000521941	CUTA	O60888	179 aa		9.2	□□□□□ -0.94
CTNNA1-231	ENST00000521941	PPP6R2	O75170	966 aa		9.2	□□□□□ -0.94
CTNNA1-231	ENST00000521941	BRD1	O95696	1058 aa		9.2	□□□□□ -0.94
CTNNA1-231	ENST00000521941	IRS1	P35568	1242 aa		9.2	□□□□□ -0.94
CTNNA1-231	ENST00000521941	MATR3	P43243	847 aa	Known RBP eCLIP	9.2	□□□□□ -0.94
CTNNA1-231	ENST00000521941	EFNA5	P52803	228 aa		9.2	□□□□□ -0.94
CTNNA1-231	ENST00000521941	SMTN	P53814	917 aa		9.2	□□□□□ -0.94
CTNNA1-231	ENST00000521941	BCAR1	P56945	870 aa		9.2	□□□□□ -0.94
CTNNA1-231	ENST00000521941	OSTN	P61366	133 aa		9.2	□□□□□ -0.94
CTNNA1-231	ENST00000521941	STRN3	Q13033	797 aa		9.2	□□□□□ -0.94
CTNNA1-231	ENST00000521941	TCEAL5	Q5H9L2	206 aa		9.2	□□□□□ -0.94
CTNNA1-231	ENST00000521941	NT5DC1	Q5TFE4	455 aa		9.2	□□□□□ -0.94
CTNNA1-231	ENST00000521941	PLPP4	Q5VZY2	271 aa		9.2	□□□□□ -0.94
CTNNA1-231	ENST00000521941	CCDC73	Q6ZRK6	1079 aa		9.2	□□□□□ -0.94
CTNNA1-231	ENST00000521941	TAS1R3	Q7RTX0	852 aa		9.2	□□□□□ -0.94
CTNNA1-231	ENST00000521941	MRPL10	Q7Z7H8	261 aa	Known RBP	9.2	□□□□□ -0.94
CTNNA1-231	ENST00000521941	ADGRD2	Q7Z7M1	963 aa		9.2	□□□□□ -0.94
CTNNA1-231	ENST00000521941	ZBTB33	Q86T24	672 aa		9.2	□□□□□ -0.94
CTNNA1-231	ENST00000521941	KCTD17	Q8N5Z5	321 aa		9.2	□□□□□ -0.94
CTNNA1-231	ENST00000521941	MYCT1	Q8N699	235 aa		9.2	□□□□□ -0.94
CTNNA1-231	ENST00000521941	CNNM3	Q8NE01	707 aa		9.2	□□□□□ -0.94
CTNNA1-231	ENST00000521941	SPPL3	Q8TCT6	385 aa		9.2	□□□□□ -0.94
CTNNA1-231	ENST00000521941	KCNG4	Q8TDN1	519 aa		9.2	□□□□□ -0.94
CTNNA1-231	ENST00000521941	MICAL1	Q8TDZ2	1067 aa		9.2	□□□□□ -0.94
CTNNA1-231	ENST00000521941	STAM	Q92783	540 aa		9.2	□□□□□ -0.94
CTNNA1-231	ENST00000521941	P2RX5	Q93086	422 aa		9.2	□□□□□ -0.94
CTNNA1-231	ENST00000521941	DHX58	Q96C10	678 aa		9.2	□□□□□ -0.94
CTNNA1-231	ENST00000521941	TARS2	Q9BW92	718 aa	Known RBP	9.2	□□□□□ -0.94
CTNNA1-231	ENST00000521941	LMAN2L	Q9H0V9	348 aa		9.2	□□□□□ -0.94
CTNNA1-231	ENST00000521941	NSUN3	Q9H649	340 aa	Known RBP	9.2	□□□□□ -0.94
CTNNA1-231	ENST00000521941	IGFLR1	Q9H665	355 aa		9.2	□□□□□ -0.94
CTNNA1-231	ENST00000521941	NRDE2	Q9H7Z3	1164 aa		9.2	□□□□□ -0.94
CTNNA1-231	ENST00000521941	ENTPD7	Q9NQZ7	604 aa		9.2	□□□□□ -0.94
CTNNA1-231	ENST00000521941	SNTG2	Q9NY99	539 aa		9.2	□□□□□ -0.94
CTNNA1-231	ENST00000521941	LMCD1	Q9NZU5	365 aa		9.2	□□□□□ -0.94
CTNNA1-231	ENST00000521941	KCND2	Q9NZV8	630 aa		9.2	□□□□□ -0.94
CTNNA1-231	ENST00000521941	LARS	Q9P2J5	1176 aa	Known RBP	9.2	□□□□□ -0.94
CTNNA1-231	ENST00000521941	ARHGAP28	Q9P2N2	729 aa		9.2	□□□□□ -0.94
CTNNA1-231	ENST00000521941	ANKFY1	Q9P2R3	1169 aa		9.2	□□□□□ -0.94
CTNNA1-231	ENST00000521941	ODF2L	Q9ULJ1	636 aa		9.2	□□□□□ -0.94
CTNNA1-231	ENST00000521941	ZDHHC9	Q9Y397	364 aa		9.2	□□□□□ -0.94
CTNNA1-231	ENST00000521941	MYO7A	Q13402	2215 aa		9.2	□□□□□ -0.94
CTNNA1-231	ENST00000521941	ARL5C	A6NH57	179 aa		9.19	□□□□□ -0.94
CTNNA1-231	ENST00000521941	RECQL4	O94761	1208 aa		9.19	□□□□□ -0.94
CTNNA1-231	ENST00000521941	DDHD2	O94830	711 aa		9.19	□□□□□ -0.94
CTNNA1-231	ENST00000521941	IDE	P14735	1019 aa		9.19	□□□□□ -0.94
CTNNA1-231	ENST00000521941	POU3F3	P20264	500 aa	Predicted RBP	9.19	□□□□□ -0.94
CTNNA1-231	ENST00000521941	DDIT3	P35638	169 aa		9.19	□□□□□ -0.94
CTNNA1-231	ENST00000521941	PPM1A	P35813	382 aa		9.19	□□□□□ -0.94
CTNNA1-231	ENST00000521941	OR1G1	P47890	313 aa		9.19	□□□□□ -0.94
CTNNA1-231	ENST00000521941	SLC11A1	P49279	550 aa		9.19	□□□□□ -0.94
CTNNA1-231	ENST00000521941	ALDH7A1	P49419	539 aa	Known RBP	9.19	□□□□□ -0.94
CTNNA1-231	ENST00000521941	KRT85	P78386	507 aa		9.19	□□□□□ -0.94

Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms