RNA–Protein interactions for RNA: ENST00000521724.5

CTNNA1-230, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,741 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-230ENST00000521724 LGR5O75473 907 aa10.3□□□□□ -0.76
CTNNA1-230ENST00000521724 EYA4O95677 639 aa10.3□□□□□ -0.76
CTNNA1-230ENST00000521724 USP17L8P0C7I0 530 aa10.3□□□□□ -0.76
CTNNA1-230ENST00000521724 GSTT1P30711 240 aa10.3□□□□□ -0.76
CTNNA1-230ENST00000521724 SERPINB4P48594 390 aa10.3□□□□□ -0.76
CTNNA1-230ENST00000521724 YARSP54577 528 aaKnown RBP10.3□□□□□ -0.76
CTNNA1-230ENST00000521724 LMNB2Q03252 620 aa10.3□□□□□ -0.76
CTNNA1-230ENST00000521724 STRN3Q13033 797 aa10.3□□□□□ -0.76
CTNNA1-230ENST00000521724 CALCOCO2Q13137 446 aa10.3□□□□□ -0.76
CTNNA1-230ENST00000521724 TTLL12Q14166 644 aaPredicted RBP10.3□□□□□ -0.76
CTNNA1-230ENST00000521724 SNX30Q5VWJ9 437 aa10.3□□□□□ -0.76
CTNNA1-230ENST00000521724 AADACL2Q6P093 401 aa10.3□□□□□ -0.76
CTNNA1-230ENST00000521724 TRMT10CQ7L0Y3 403 aaKnown RBP10.3□□□□□ -0.76
CTNNA1-230ENST00000521724 TXNRD3Q86VQ6 643 aa10.3□□□□□ -0.76
CTNNA1-230ENST00000521724 ALG3Q92685 438 aa10.3□□□□□ -0.76
CTNNA1-230ENST00000521724 NUDT12Q9BQG2 462 aa10.3□□□□□ -0.76
CTNNA1-230ENST00000521724 CDCA7Q9BWT1 371 aaPredicted RBP10.3□□□□□ -0.76
CTNNA1-230ENST00000521724 FGFBP2Q9BYJ0 223 aa10.3□□□□□ -0.76
CTNNA1-230ENST00000521724 NT5C3AQ9H0P0 336 aa10.3□□□□□ -0.76
CTNNA1-230ENST00000521724 CDC42EP4Q9H3Q1 356 aaKnown RBP10.3□□□□□ -0.76
CTNNA1-230ENST00000521724 TBK1Q9UHD2 729 aa10.3□□□□□ -0.76
CTNNA1-230ENST00000521724 PCYOX1Q9UHG3 505 aa10.3□□□□□ -0.76
CTNNA1-230ENST00000521724 MAD2L2Q9UI95 211 aa10.3□□□□□ -0.76
CTNNA1-230ENST00000521724 CHKBQ9Y259 395 aa10.3□□□□□ -0.76
CTNNA1-230ENST00000521724 USP20Q9Y2K6 914 aa10.3□□□□□ -0.76
CTNNA1-230ENST00000521724 USH1CQ9Y6N9 552 aa10.3□□□□□ -0.76
CTNNA1-230ENST00000521724 COL22A1Q8NFW1 1626 aaPredicted RBP10.3□□□□□ -0.76
CTNNA1-230ENST00000521724 ATP8B3O60423 1300 aa10.3□□□□□ -0.76
CTNNA1-230ENST00000521724 LOC102724428A0A0B4J2F2 783 aa10.29□□□□□ -0.76
CTNNA1-230ENST00000521724 NR2F2P24468 414 aa10.29□□□□□ -0.76
CTNNA1-230ENST00000521724 GNA11P29992 359 aa10.29□□□□□ -0.76
CTNNA1-230ENST00000521724 SIK1P57059 783 aa10.29□□□□□ -0.76
CTNNA1-230ENST00000521724 DCAF17Q5H9S7 520 aaPredicted RBP10.29□□□□□ -0.76
CTNNA1-230ENST00000521724 RASIP1Q5U651 963 aa10.29□□□□□ -0.76
CTNNA1-230ENST00000521724 TCERG1LQ5VWI1 586 aa10.29□□□□□ -0.76
CTNNA1-230ENST00000521724 CCNJLQ8IV13 435 aa10.29□□□□□ -0.76
CTNNA1-230ENST00000521724 GLYCTKQ8IVS8 523 aa10.29□□□□□ -0.76
CTNNA1-230ENST00000521724 SRRM1Q8IYB3 904 aaKnown RBP10.29□□□□□ -0.76
CTNNA1-230ENST00000521724 PBXIP1Q96AQ6 731 aa10.29□□□□□ -0.76
CTNNA1-230ENST00000521724 SLC7A6OSQ96CW6 309 aaPredicted RBP10.29□□□□□ -0.76
CTNNA1-230ENST00000521724 DNAJC19Q96DA6 116 aa10.29□□□□□ -0.76
CTNNA1-230ENST00000521724 DYNLL2Q96FJ2 89 aa10.29□□□□□ -0.76
CTNNA1-230ENST00000521724 C6orf50Q9HD87 102 aa10.29□□□□□ -0.76
CTNNA1-230ENST00000521724 IL17RBQ9NRM6 502 aa10.29□□□□□ -0.76
CTNNA1-230ENST00000521724 NENFQ9UMX5 172 aa10.29□□□□□ -0.76
CTNNA1-230ENST00000521724 SYNGAP1Q96PV0 1343 aa10.29□□□□□ -0.76
CTNNA1-230ENST00000521724 KIF13BQ9NQT8 1826 aa10.29□□□□□ -0.76
CTNNA1-230ENST00000521724 MAGEA13PA6NCF6 341 aa10.29□□□□□ -0.76
CTNNA1-230ENST00000521724 DCTN3O75935 186 aa10.29□□□□□ -0.76
CTNNA1-230ENST00000521724 GFPT2O94808 682 aa10.29□□□□□ -0.76
CTNNA1-230ENST00000521724 CBX6O95503 412 aa10.29□□□□□ -0.76
CTNNA1-230ENST00000521724 VCAM1P19320 739 aa10.29□□□□□ -0.76
CTNNA1-230ENST00000521724 TAC1P20366 129 aa10.29□□□□□ -0.76
CTNNA1-230ENST00000521724 IL9RQ01113 521 aa10.29□□□□□ -0.76
CTNNA1-230ENST00000521724 TFAP4Q01664 338 aa10.29□□□□□ -0.76
CTNNA1-230ENST00000521724 PPATQ06203 517 aa10.29□□□□□ -0.76
CTNNA1-230ENST00000521724 RRP1BQ14684 758 aaKnown RBP10.29□□□□□ -0.76
CTNNA1-230ENST00000521724 ZRSR2Q15696 482 aaKnown RBP10.29□□□□□ -0.76
CTNNA1-230ENST00000521724 KHDC1Q4VXA5 237 aaKnown RBP10.29□□□□□ -0.76
CTNNA1-230ENST00000521724 HERC4Q5GLZ8 1057 aaPredicted RBP10.29□□□□□ -0.76
CTNNA1-230ENST00000521724 TTC27Q6P3X3 843 aa10.29□□□□□ -0.76
CTNNA1-230ENST00000521724 PRELID2Q8N945 189 aa10.29□□□□□ -0.76
CTNNA1-230ENST00000521724 SH3TC2Q8TF17 1288 aa10.29□□□□□ -0.76
CTNNA1-230ENST00000521724 SCG3Q8WXD2 468 aaKnown RBP10.29□□□□□ -0.76
CTNNA1-230ENST00000521724 ART4Q93070 314 aa10.29□□□□□ -0.76
CTNNA1-230ENST00000521724 OPTNQ96CV9 577 aa10.29□□□□□ -0.76
CTNNA1-230ENST00000521724 NDNQ99608 321 aa10.29□□□□□ -0.76
CTNNA1-230ENST00000521724 EMILIN3Q9NT22 766 aa10.29□□□□□ -0.76
CTNNA1-230ENST00000521724 USTQ9Y2C2 406 aa10.29□□□□□ -0.76
CTNNA1-230ENST00000521724 KCNQ2O43526 872 aa10.28□□□□□ -0.76
CTNNA1-230ENST00000521724 TJP3O95049 919 aa10.28□□□□□ -0.76
CTNNA1-230ENST00000521724 TTLL1O95922 423 aa10.28□□□□□ -0.76
CTNNA1-230ENST00000521724 XRCC5P13010 732 aaKnown RBP10.28□□□□□ -0.76
CTNNA1-230ENST00000521724 HSPA6P17066 643 aa10.28□□□□□ -0.76
CTNNA1-230ENST00000521724 MARK3P27448 753 aa10.28□□□□□ -0.76
CTNNA1-230ENST00000521724 FXR2P51116 673 aaKnown RBP eCLIP10.28□□□□□ -0.763e-10■■■■■ 41
CTNNA1-230ENST00000521724 GRM4Q14833 912 aa10.28□□□□□ -0.76
CTNNA1-230ENST00000521724 PPP1R21Q6ZMI0 780 aa10.28□□□□□ -0.76
CTNNA1-230ENST00000521724 SEPT14Q6ZU15 432 aa10.28□□□□□ -0.76
CTNNA1-230ENST00000521724 SESTD1Q86VW0 696 aa10.28□□□□□ -0.76
CTNNA1-230ENST00000521724 FAM192AQ9GZU8 254 aa10.28□□□□□ -0.76
CTNNA1-230ENST00000521724 BIN2Q9UBW5 565 aaPredicted RBP10.28□□□□□ -0.76
CTNNA1-230ENST00000521724 PCDHA3Q9Y5H8 950 aa10.28□□□□□ -0.76
CTNNA1-230ENST00000521724 ANKRD63C9JTQ0 380 aa10.28□□□□□ -0.76
CTNNA1-230ENST00000521724 TMEM253P0C7T8 217 aa10.28□□□□□ -0.76
CTNNA1-230ENST00000521724 GOLGA8HP0CJ92 632 aa10.28□□□□□ -0.76
CTNNA1-230ENST00000521724 STAT1P42224 750 aa10.28□□□□□ -0.76
CTNNA1-230ENST00000521724 CACNB1Q02641 598 aaPredicted RBP10.28□□□□□ -0.76
CTNNA1-230ENST00000521724 PARP10Q53GL7 1025 aa10.28□□□□□ -0.76
CTNNA1-230ENST00000521724 DPY19L2P1Q6NXN4 242 aa10.28□□□□□ -0.76
CTNNA1-230ENST00000521724 DPH6Q7L8W6 267 aa10.28□□□□□ -0.76
CTNNA1-230ENST00000521724 DGKHQ86XP1 1220 aa10.28□□□□□ -0.76
CTNNA1-230ENST00000521724 CCDC65Q8IXS2 484 aa10.28□□□□□ -0.76
CTNNA1-230ENST00000521724 PPFIBP2Q8ND30 876 aa10.28□□□□□ -0.76
CTNNA1-230ENST00000521724 SCFD1Q8WVM8 642 aa10.28□□□□□ -0.76
CTNNA1-230ENST00000521724 MTMR9Q96QG7 549 aa10.28□□□□□ -0.76
CTNNA1-230ENST00000521724 TIPINQ9BVW5 301 aa10.28□□□□□ -0.76
CTNNA1-230ENST00000521724 VCX3BQ9H321 246 aa10.28□□□□□ -0.76
CTNNA1-230ENST00000521724 KCTD10Q9H3F6 313 aa10.28□□□□□ -0.76
CTNNA1-230ENST00000521724 ZHX3Q9H4I2 956 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms