RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 FAM135AQ9P2D6 1515 aa4.45□□□□□ -1.7
VPS13B-209ENST00000521559 EIF2AK4Q9P2K8 1649 aaKnown RBP4.44□□□□□ -1.7
VPS13B-209ENST00000521559 C2orf78A6NCI8 922 aa4.44□□□□□ -1.7
VPS13B-209ENST00000521559 CAPN14A8MX76 684 aa4.44□□□□□ -1.7
VPS13B-209ENST00000521559 ENPP3O14638 875 aa4.44□□□□□ -1.7
VPS13B-209ENST00000521559 AKAP8O43823 692 aaKnown RBP4.44□□□□□ -1.7
VPS13B-209ENST00000521559 LSSP48449 732 aa4.44□□□□□ -1.7
VPS13B-209ENST00000521559 IL2P60568 153 aa4.44□□□□□ -1.7
VPS13B-209ENST00000521559 PHC1P78364 1004 aa4.44□□□□□ -1.7
VPS13B-209ENST00000521559 SMAD3P84022 425 aaKnown RBP4.44□□□□□ -1.7
VPS13B-209ENST00000521559 DALRD3Q5D0E6 543 aaKnown RBP4.44□□□□□ -1.7
VPS13B-209ENST00000521559 MIIPQ5JXC2 388 aa4.44□□□□□ -1.7
VPS13B-209ENST00000521559 MFSD5Q6N075 450 aa4.44□□□□□ -1.7
VPS13B-209ENST00000521559 ZNF662Q6ZS27 426 aa4.44□□□□□ -1.7
VPS13B-209ENST00000521559 KIAA0907Q7Z7F0 614 aaPredicted RBP4.44□□□□□ -1.7
VPS13B-209ENST00000521559 GSPT2Q8IYD1 628 aaKnown RBP4.44□□□□□ -1.7
VPS13B-209ENST00000521559 EXTL1Q92935 676 aa4.44□□□□□ -1.7
VPS13B-209ENST00000521559 MIEF2Q96C03 454 aa4.44□□□□□ -1.7
VPS13B-209ENST00000521559 TCF25Q9BQ70 676 aa4.44□□□□□ -1.7
VPS13B-209ENST00000521559 CSRNP2Q9H175 543 aa4.44□□□□□ -1.7
VPS13B-209ENST00000521559 POFUT1Q9H488 388 aa4.44□□□□□ -1.7
VPS13B-209ENST00000521559 ZMAT4Q9H898 229 aa4.44□□□□□ -1.7
VPS13B-209ENST00000521559 SLC52A1Q9NWF4 448 aa4.44□□□□□ -1.7
VPS13B-209ENST00000521559 DNAI1Q9UI46 699 aa4.44□□□□□ -1.7
VPS13B-209ENST00000521559 ABCC3O15438 1527 aa4.44□□□□□ -1.7
VPS13B-209ENST00000521559 LMTK2Q8IWU2 1503 aa4.44□□□□□ -1.7
VPS13B-209ENST00000521559 NPATQ14207 1427 aa4.44□□□□□ -1.7
VPS13B-209ENST00000521559 ADAMTSL3P82987 1691 aa4.44□□□□□ -1.7
VPS13B-209ENST00000521559 VWDEQ8N2E2 1590 aa4.44□□□□□ -1.7
VPS13B-209ENST00000521559 MYPNQ86TC9 1320 aa4.44□□□□□ -1.7
VPS13B-209ENST00000521559 SIGLEC1Q9BZZ2 1709 aa4.43□□□□□ -1.7
VPS13B-209ENST00000521559 PZPP20742 1482 aa4.43□□□□□ -1.7
VPS13B-209ENST00000521559 MROH1Q8NDA8 1641 aa4.43□□□□□ -1.7
VPS13B-209ENST00000521559 RNF17Q9BXT8 1623 aaKnown RBP4.43□□□□□ -1.7
VPS13B-209ENST00000521559 TNRQ92752 1358 aa4.43□□□□□ -1.7
VPS13B-209ENST00000521559 PRDM15P57071 1507 aaPredicted RBP4.43□□□□□ -1.7
VPS13B-209ENST00000521559 ZNF891A8MT65 544 aaPredicted RBP4.43□□□□□ -1.7
VPS13B-209ENST00000521559 MTSS1O43312 755 aa4.43□□□□□ -1.7
VPS13B-209ENST00000521559 NRP2O60462 931 aa4.43□□□□□ -1.7
VPS13B-209ENST00000521559 OPHN1O60890 802 aa4.43□□□□□ -1.7
VPS13B-209ENST00000521559 RAB11FIP3O75154 756 aa4.43□□□□□ -1.7
VPS13B-209ENST00000521559 TOX4O94842 621 aa4.43□□□□□ -1.7
VPS13B-209ENST00000521559 XPAP23025 273 aaPredicted RBP4.43□□□□□ -1.7
VPS13B-209ENST00000521559 ACVRL1P37023 503 aa4.43□□□□□ -1.7
VPS13B-209ENST00000521559 KIR2DL3P43628 341 aa4.43□□□□□ -1.7
VPS13B-209ENST00000521559 GPR15P49685 360 aa4.43□□□□□ -1.7
VPS13B-209ENST00000521559 PTH1RQ03431 593 aa4.43□□□□□ -1.7
VPS13B-209ENST00000521559 CRHR2Q13324 411 aa4.43□□□□□ -1.7
VPS13B-209ENST00000521559 IDI1Q13907 227 aa4.43□□□□□ -1.7
VPS13B-209ENST00000521559 PCBP1Q15365 356 aaKnown RBP eCLIP4.43□□□□□ -1.7
VPS13B-209ENST00000521559 CCDC178Q5BJE1 867 aa4.43□□□□□ -1.7
VPS13B-209ENST00000521559 FAM111BQ6SJ93 734 aa4.43□□□□□ -1.7
VPS13B-209ENST00000521559 GAREM2Q75VX8 874 aa4.43□□□□□ -1.7
VPS13B-209ENST00000521559 JAZF1Q86VZ6 243 aa4.43□□□□□ -1.7
VPS13B-209ENST00000521559 CDYL2Q8N8U2 506 aa4.43□□□□□ -1.7
VPS13B-209ENST00000521559 ZNF610Q8N9Z0 462 aa4.43□□□□□ -1.7
VPS13B-209ENST00000521559 SMC1BQ8NDV3 1235 aa4.43□□□□□ -1.7
VPS13B-209ENST00000521559 RSAD2Q8WXG1 361 aa4.43□□□□□ -1.7
VPS13B-209ENST00000521559 ARL8AQ96BM9 186 aa4.43□□□□□ -1.7
VPS13B-209ENST00000521559 ZNF503Q96F45 646 aa4.43□□□□□ -1.7
VPS13B-209ENST00000521559 GPR101Q96P66 508 aaPredicted RBP4.43□□□□□ -1.7
VPS13B-209ENST00000521559 TARS2Q9BW92 718 aaKnown RBP4.43□□□□□ -1.7
VPS13B-209ENST00000521559 WNT8AQ9H1J5 351 aa4.43□□□□□ -1.7
VPS13B-209ENST00000521559 SLKQ9H2G2 1235 aaPredicted RBP4.43□□□□□ -1.7
VPS13B-209ENST00000521559 ZNF703Q9H7S9 590 aaPredicted RBP4.43□□□□□ -1.7
VPS13B-209ENST00000521559 AGO3Q9H9G7 860 aaKnown RBP4.43□□□□□ -1.7
VPS13B-209ENST00000521559 IL23AQ9NPF7 189 aa4.43□□□□□ -1.7
VPS13B-209ENST00000521559 PARPBPQ9NWS1 579 aa4.43□□□□□ -1.7
VPS13B-209ENST00000521559 H2AFY2Q9P0M6 372 aaPredicted RBP4.43□□□□□ -1.7
VPS13B-209ENST00000521559 MSRAQ9UJ68 235 aa4.43□□□□□ -1.7
VPS13B-209ENST00000521559 MAPRE3Q9UPY8 281 aa4.43□□□□□ -1.7
VPS13B-209ENST00000521559 NOS1P29475 1434 aa4.43□□□□□ -1.7
VPS13B-209ENST00000521559 BCORL1Q5H9F3 1711 aa4.43□□□□□ -1.7
VPS13B-209ENST00000521559 RPRD2Q5VT52 1461 aaKnown RBP4.43□□□□□ -1.7
VPS13B-209ENST00000521559 KRTAP23-1A1A580 65 aa4.42□□□□□ -1.7
VPS13B-209ENST00000521559 UBE2QL1A1L167 161 aa4.42□□□□□ -1.7
VPS13B-209ENST00000521559 PTPRTO14522 1441 aa4.42□□□□□ -1.7
VPS13B-209ENST00000521559 NRP1O14786 923 aa4.42□□□□□ -1.7
VPS13B-209ENST00000521559 UNC13BO14795 1591 aa4.42□□□□□ -1.7
VPS13B-209ENST00000521559 MFAP3LO75121 409 aa4.42□□□□□ -1.7
VPS13B-209ENST00000521559 MCM7P33993 719 aa4.42□□□□□ -1.7
VPS13B-209ENST00000521559 NPEPPSP55786 919 aa4.42□□□□□ -1.7
VPS13B-209ENST00000521559 NRG3P56975 720 aa4.42□□□□□ -1.7
VPS13B-209ENST00000521559 CNGB1Q14028 1251 aaPredicted RBP4.42□□□□□ -1.7
VPS13B-209ENST00000521559 LSM12Q3MHD2 195 aaKnown RBP4.42□□□□□ -1.7
VPS13B-209ENST00000521559 FRMD7Q6ZUT3 714 aa4.42□□□□□ -1.7
VPS13B-209ENST00000521559 CMTM4Q8IZR5 234 aa4.42□□□□□ -1.7
VPS13B-209ENST00000521559 SORCS2Q96PQ0 1159 aa4.42□□□□□ -1.7
VPS13B-209ENST00000521559 PLEKHG4BQ96PX9 1271 aa4.42□□□□□ -1.7
VPS13B-209ENST00000521559 GPHA2Q96T91 129 aa4.42□□□□□ -1.7
VPS13B-209ENST00000521559 KRTAP17-1Q9BYP8 105 aa4.42□□□□□ -1.7
VPS13B-209ENST00000521559 SH3BP1Q9Y3L3 701 aa4.42□□□□□ -1.7
VPS13B-209ENST00000521559 PCDHB6Q9Y5E3 794 aa4.42□□□□□ -1.7
VPS13B-209ENST00000521559 HS3ST3A1Q9Y663 406 aa4.42□□□□□ -1.7
VPS13B-209ENST00000521559 ERVK-7P63135 1459 aa4.42□□□□□ -1.7
VPS13B-209ENST00000521559 PLA2R1Q13018 1463 aa4.42□□□□□ -1.7
VPS13B-209ENST00000521559 ANKRD30BQ9BXX2 1392 aa4.41□□□□□ -1.7
VPS13B-209ENST00000521559 FAM83GA6ND36 823 aa4.41□□□□□ -1.7
VPS13B-209ENST00000521559 TGM5O43548 720 aa4.41□□□□□ -1.7
VPS13B-209ENST00000521559 IPO13O94829 963 aaKnown RBP4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms