RNA–Protein interactions for RNA: ENST00000520339.5

CTNNA1-221, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-221ENST00000520339 ADHFE1Q8IWW8 467 aa10.43□□□□□ -0.74
CTNNA1-221ENST00000520339 EFHBQ8N7U6 833 aa10.43□□□□□ -0.74
CTNNA1-221ENST00000520339 ETNPPLQ8TBG4 499 aa10.43□□□□□ -0.74
CTNNA1-221ENST00000520339 PPP2R3CQ969Q6 453 aa10.43□□□□□ -0.74
CTNNA1-221ENST00000520339 MSLNLQ96KJ4 702 aa10.43□□□□□ -0.74
CTNNA1-221ENST00000520339 NIFKQ9BYG3 293 aaKnown RBP10.43□□□□□ -0.74
CTNNA1-221ENST00000520339 CWH43Q9H720 699 aa10.43□□□□□ -0.74
CTNNA1-221ENST00000520339 AAASQ9NRG9 546 aa10.43□□□□□ -0.74
CTNNA1-221ENST00000520339 RAB6BQ9NRW1 208 aa10.43□□□□□ -0.74
CTNNA1-221ENST00000520339 AKT3Q9Y243 479 aa10.43□□□□□ -0.74
CTNNA1-221ENST00000520339 PCDHB12Q9Y5F1 795 aa10.43□□□□□ -0.74
CTNNA1-221ENST00000520339 COL4A4P53420 1690 aaPredicted RBP10.42□□□□□ -0.74
CTNNA1-221ENST00000520339 IGKV6-21A0A0C4DH24 114 aa10.42□□□□□ -0.74
CTNNA1-221ENST00000520339 FAM86C2PA6NEL3 165 aa10.42□□□□□ -0.74
CTNNA1-221ENST00000520339 EYA4O95677 639 aa10.42□□□□□ -0.74
CTNNA1-221ENST00000520339 SCRN1Q12765 414 aa10.42□□□□□ -0.74
CTNNA1-221ENST00000520339 STK3Q13188 491 aa10.42□□□□□ -0.74
CTNNA1-221ENST00000520339 DRP2Q13474 957 aa10.42□□□□□ -0.74
CTNNA1-221ENST00000520339 SMAD4Q13485 552 aaKnown RBP10.42□□□□□ -0.74
CTNNA1-221ENST00000520339 XKR3Q5GH77 459 aa10.42□□□□□ -0.74
CTNNA1-221ENST00000520339 SPOUT1Q5T280 376 aaKnown RBP10.42□□□□□ -0.74
CTNNA1-221ENST00000520339 LRRC55Q6ZSA7 311 aa10.42□□□□□ -0.74
CTNNA1-221ENST00000520339 MIER3Q7Z3K6 550 aa10.42□□□□□ -0.74
CTNNA1-221ENST00000520339 ECHDC2Q86YB7 292 aa10.42□□□□□ -0.74
CTNNA1-221ENST00000520339 COLGALT1Q8NBJ5 622 aa10.42□□□□□ -0.74
CTNNA1-221ENST00000520339 SNIP1Q8TAD8 396 aaKnown RBP10.42□□□□□ -0.74
CTNNA1-221ENST00000520339 ZNF668Q96K58 619 aaPredicted RBP10.42□□□□□ -0.74
CTNNA1-221ENST00000520339 CASD1Q96PB1 797 aa10.42□□□□□ -0.74
CTNNA1-221ENST00000520339 TMEM117Q9H0C3 514 aa10.42□□□□□ -0.74
CTNNA1-221ENST00000520339 CLEC1BQ9P126 229 aa10.42□□□□□ -0.74
CTNNA1-221ENST00000520339 SEPT3Q9UH03 358 aa10.42□□□□□ -0.74
CTNNA1-221ENST00000520339 CD207Q9UJ71 328 aa10.42□□□□□ -0.74
CTNNA1-221ENST00000520339 KCNJ14Q9UNX9 436 aa10.42□□□□□ -0.74
CTNNA1-221ENST00000520339 PCDHGC5Q9Y5F6 944 aa10.42□□□□□ -0.74
CTNNA1-221ENST00000520339 DOCK5Q9H7D0 1870 aa10.42□□□□□ -0.74
CTNNA1-221ENST00000520339 TMEM150BA6NC51 233 aa10.41□□□□□ -0.74
CTNNA1-221ENST00000520339 FSCN2O14926 492 aa10.41□□□□□ -0.74
CTNNA1-221ENST00000520339 SLC37A4O43826 429 aa10.41□□□□□ -0.74
CTNNA1-221ENST00000520339 PFKFB2O60825 505 aa10.41□□□□□ -0.74
CTNNA1-221ENST00000520339 FGF18O76093 207 aa10.41□□□□□ -0.74
CTNNA1-221ENST00000520339 ALADP13716 330 aa10.41□□□□□ -0.74
CTNNA1-221ENST00000520339 ZSCAN20P17040 1043 aaPredicted RBP10.41□□□□□ -0.74
CTNNA1-221ENST00000520339 NRIP1P48552 1158 aa10.41□□□□□ -0.74
CTNNA1-221ENST00000520339 ERVFC1P60507 584 aa10.41□□□□□ -0.74
CTNNA1-221ENST00000520339 PLCB3Q01970 1234 aa10.41□□□□□ -0.74
CTNNA1-221ENST00000520339 TBC1D8BQ0IIM8 1120 aa10.41□□□□□ -0.74
CTNNA1-221ENST00000520339 NONOQ15233 471 aaKnown RBP eCLIP10.41□□□□□ -0.74
CTNNA1-221ENST00000520339 INF2Q27J81 1249 aa10.41□□□□□ -0.74
CTNNA1-221ENST00000520339 CAPN12Q6ZSI9 719 aa10.41□□□□□ -0.74
CTNNA1-221ENST00000520339 KRT25Q7Z3Z0 450 aa10.41□□□□□ -0.74
CTNNA1-221ENST00000520339 RBM23Q86U06 439 aaKnown RBP10.41□□□□□ -0.74
CTNNA1-221ENST00000520339 PHF20Q9BVI0 1012 aa10.41□□□□□ -0.74
CTNNA1-221ENST00000520339 TSPAN10Q9H1Z9 355 aaPredicted RBP10.41□□□□□ -0.74
CTNNA1-221ENST00000520339 DDX25Q9UHL0 483 aaKnown RBP10.41□□□□□ -0.74
CTNNA1-221ENST00000520339 TPCN1Q9ULQ1 816 aa10.41□□□□□ -0.74
CTNNA1-221ENST00000520339 A0A0U1RQF3 1178 aa10.4□□□□□ -0.74
CTNNA1-221ENST00000520339 TTC24A2A3L6 582 aaPredicted RBP10.4□□□□□ -0.74
CTNNA1-221ENST00000520339 EML1O00423 815 aa10.4□□□□□ -0.74
CTNNA1-221ENST00000520339 PER2O15055 1255 aa10.4□□□□□ -0.74
CTNNA1-221ENST00000520339 DCXO43602 365 aa10.4□□□□□ -0.74
CTNNA1-221ENST00000520339 CDKL5O76039 1030 aa10.4□□□□□ -0.74
CTNNA1-221ENST00000520339 GLP2RO95838 553 aa10.4□□□□□ -0.74
CTNNA1-221ENST00000520339 LAG3P18627 525 aa10.4□□□□□ -0.74
CTNNA1-221ENST00000520339 FGFR4P22455 802 aa10.4□□□□□ -0.74
CTNNA1-221ENST00000520339 PLA2G5P39877 138 aa10.4□□□□□ -0.74
CTNNA1-221ENST00000520339 NDUFV1P49821 464 aa10.4□□□□□ -0.74
CTNNA1-221ENST00000520339 PSMC5P62195 406 aa10.4□□□□□ -0.74
CTNNA1-221ENST00000520339 CDC42EP1Q00587 391 aa10.4□□□□□ -0.74
CTNNA1-221ENST00000520339 COASYQ13057 564 aa10.4□□□□□ -0.74
CTNNA1-221ENST00000520339 CBLBQ13191 982 aa10.4□□□□□ -0.74
CTNNA1-221ENST00000520339 ZNF211Q13398 564 aaPredicted RBP10.4□□□□□ -0.74
CTNNA1-221ENST00000520339 DUSP6Q16828 381 aa10.4□□□□□ -0.74
CTNNA1-221ENST00000520339 LETM2Q2VYF4 491 aa10.4□□□□□ -0.74
CTNNA1-221ENST00000520339 MTERF2Q49AM1 385 aa10.4□□□□□ -0.74
CTNNA1-221ENST00000520339 CLLU1OSQ5K130 101 aa10.4□□□□□ -0.74
CTNNA1-221ENST00000520339 PPP4R3AQ6IN85 833 aa10.4□□□□□ -0.74
CTNNA1-221ENST00000520339 PDE12Q6L8Q7 609 aaKnown RBP10.4□□□□□ -0.74
CTNNA1-221ENST00000520339 ANO5Q75V66 913 aa10.4□□□□□ -0.74
CTNNA1-221ENST00000520339 THNSL1Q8IYQ7 743 aa10.4□□□□□ -0.74
CTNNA1-221ENST00000520339 SMRP1Q8NCR6 262 aa10.4□□□□□ -0.74
CTNNA1-221ENST00000520339 MICAL1Q8TDZ2 1067 aa10.4□□□□□ -0.74
CTNNA1-221ENST00000520339 FAM20AQ96MK3 541 aa10.4□□□□□ -0.74
CTNNA1-221ENST00000520339 CDCA3Q99618 268 aaPredicted RBP10.4□□□□□ -0.74
CTNNA1-221ENST00000520339 GCOM2Q9BZD3 368 aaPredicted RBP10.4□□□□□ -0.74
CTNNA1-221ENST00000520339 SLKQ9H2G2 1235 aaPredicted RBP10.4□□□□□ -0.74
CTNNA1-221ENST00000520339 TLE6Q9H808 572 aa10.4□□□□□ -0.74
CTNNA1-221ENST00000520339 KCNMB3Q9NPA1 279 aa10.4□□□□□ -0.74
CTNNA1-221ENST00000520339 TLR9Q9NR96 1032 aa10.4□□□□□ -0.74
CTNNA1-221ENST00000520339 GJB4Q9NTQ9 266 aa10.4□□□□□ -0.74
CTNNA1-221ENST00000520339 VAV3Q9UKW4 847 aa10.4□□□□□ -0.74
CTNNA1-221ENST00000520339 LZTS1Q9Y250 596 aa10.4□□□□□ -0.74
CTNNA1-221ENST00000520339 SIP14410 1827 aa10.4□□□□□ -0.75
CTNNA1-221ENST00000520339 STK36Q9NRP7 1315 aa10.39□□□□□ -0.75
CTNNA1-221ENST00000520339 REV3LO60673 3130 aa10.39□□□□□ -0.75
CTNNA1-221ENST00000520339 A0A087WZ62 844 aa10.39□□□□□ -0.75
CTNNA1-221ENST00000520339 CCDC194A0A1B0GVG4 234 aa10.39□□□□□ -0.75
CTNNA1-221ENST00000520339 PRR33A8MZF0 331 aa10.39□□□□□ -0.75
CTNNA1-221ENST00000520339 DTNBO60941 627 aa10.39□□□□□ -0.75
CTNNA1-221ENST00000520339 CSDE1O75534 798 aaKnown RBP10.39□□□□□ -0.75
CTNNA1-221ENST00000520339 CTDNEP1O95476 244 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms