RNA–Protein interactions for RNA: ENST00000519674.1

TRPS1-209, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 1 (best) BASIC

Gene TRPS1, Length 3,116 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-209ENST00000519674 SYDE2Q5VT97 1194 aa9.08□□□□□ -0.96
TRPS1-209ENST00000519674 ZNF280DQ6N043 979 aa9.08□□□□□ -0.96
TRPS1-209ENST00000519674 CDC42EP5Q6NZY7 148 aa9.08□□□□□ -0.96
TRPS1-209ENST00000519674 FAM13CQ8NE31 585 aa9.08□□□□□ -0.96
TRPS1-209ENST00000519674 CTNNBL1Q8WYA6 563 aaPredicted RBP9.08□□□□□ -0.96
TRPS1-209ENST00000519674 PSMB7Q99436 277 aa9.08□□□□□ -0.96
TRPS1-209ENST00000519674 TTYH3Q9C0H2 523 aa9.08□□□□□ -0.96
TRPS1-209ENST00000519674 LRMDAQ9H2I8 198 aa9.08□□□□□ -0.96
TRPS1-209ENST00000519674 RIOX1Q9H6W3 641 aa9.08□□□□□ -0.96
TRPS1-209ENST00000519674 HESX1Q9UBX0 185 aa9.08□□□□□ -0.96
TRPS1-209ENST00000519674 RWDD2AQ9UIY3 292 aa9.08□□□□□ -0.96
TRPS1-209ENST00000519674 PNMA2Q9UL42 364 aa9.08□□□□□ -0.96
TRPS1-209ENST00000519674 RPL26L1Q9UNX3 145 aaKnown RBP9.08□□□□□ -0.96
TRPS1-209ENST00000519674 SUGT1Q9Y2Z0 365 aa9.08□□□□□ -0.96
TRPS1-209ENST00000519674 PLIN4Q96Q06 1357 aa9.08□□□□□ -0.96
TRPS1-209ENST00000519674 GRID2IPA4D2P6 1211 aa9.08□□□□□ -0.96
TRPS1-209ENST00000519674 LSM1O15116 133 aaKnown RBP9.08□□□□□ -0.96
TRPS1-209ENST00000519674 APBA3O96018 575 aa9.08□□□□□ -0.96
TRPS1-209ENST00000519674 PDGFRBP09619 1106 aa9.08□□□□□ -0.96
TRPS1-209ENST00000519674 PLCG1P19174 1290 aa9.08□□□□□ -0.96
TRPS1-209ENST00000519674 ERVK-9P63128 1117 aa9.08□□□□□ -0.96
TRPS1-209ENST00000519674 TTLL12Q14166 644 aaPredicted RBP9.08□□□□□ -0.96
TRPS1-209ENST00000519674 MAP7Q14244 749 aa9.08□□□□□ -0.96
TRPS1-209ENST00000519674 TSR1Q2NL82 804 aaKnown RBP9.08□□□□□ -0.96
TRPS1-209ENST00000519674 KRT71Q3SY84 523 aa9.08□□□□□ -0.96
TRPS1-209ENST00000519674 MS4A14Q96JA4 679 aa9.08□□□□□ -0.96
TRPS1-209ENST00000519674 DDX23Q9BUQ8 820 aaKnown RBP9.08□□□□□ -0.96
TRPS1-209ENST00000519674 CCSER1Q9C0I3 900 aa9.08□□□□□ -0.96
TRPS1-209ENST00000519674 DCLRE1BQ9H816 532 aa9.08□□□□□ -0.96
TRPS1-209ENST00000519674 TBCCD1Q9NVR7 557 aa9.08□□□□□ -0.96
TRPS1-209ENST00000519674 LARSQ9P2J5 1176 aaKnown RBP9.08□□□□□ -0.96
TRPS1-209ENST00000519674 LRWD1Q9UFC0 647 aa9.08□□□□□ -0.96
TRPS1-209ENST00000519674 FBXL5Q9UKA1 691 aa9.08□□□□□ -0.96
TRPS1-209ENST00000519674 PCDHAC2Q9Y5I4 1007 aa9.08□□□□□ -0.96
TRPS1-209ENST00000519674 RAD51CO43502 376 aa9.07□□□□□ -0.96
TRPS1-209ENST00000519674 SUN1O94901 812 aa9.07□□□□□ -0.96
TRPS1-209ENST00000519674 TTLL1O95922 423 aa9.07□□□□□ -0.96
TRPS1-209ENST00000519674 AFPP02771 609 aaKnown RBP9.07□□□□□ -0.96
TRPS1-209ENST00000519674 PABPC4LP0CB38 370 aaKnown RBP9.07□□□□□ -0.96
TRPS1-209ENST00000519674 STIP1P31948 543 aaKnown RBP9.07□□□□□ -0.96
TRPS1-209ENST00000519674 SHMT1P34896 483 aa9.07□□□□□ -0.96
TRPS1-209ENST00000519674 MTTPP55157 894 aa9.07□□□□□ -0.96
TRPS1-209ENST00000519674 CYP27A1Q02318 531 aa9.07□□□□□ -0.96
TRPS1-209ENST00000519674 MAP7D1Q3KQU3 841 aa9.07□□□□□ -0.96
TRPS1-209ENST00000519674 APOBEC3HQ6NTF7 200 aaKnown RBP9.07□□□□□ -0.96
TRPS1-209ENST00000519674 C3orf62Q6ZUJ4 267 aa9.07□□□□□ -0.96
TRPS1-209ENST00000519674 CABP7Q86V35 215 aa9.07□□□□□ -0.96
TRPS1-209ENST00000519674 TMEM237Q96Q45 408 aa9.07□□□□□ -0.96
TRPS1-209ENST00000519674 KRT12Q99456 494 aa9.07□□□□□ -0.96
TRPS1-209ENST00000519674 CENPKQ9BS16 269 aa9.07□□□□□ -0.96
TRPS1-209ENST00000519674 MLXIPQ9HAP2 919 aa9.07□□□□□ -0.96
TRPS1-209ENST00000519674 LRRC4CQ9HCJ2 640 aa9.07□□□□□ -0.96
TRPS1-209ENST00000519674 TAB2Q9NYJ8 693 aa9.07□□□□□ -0.96
TRPS1-209ENST00000519674 ZNF219Q9P2Y4 722 aaPredicted RBP9.07□□□□□ -0.96
TRPS1-209ENST00000519674 STOML1Q9UBI4 398 aa9.07□□□□□ -0.96
TRPS1-209ENST00000519674 PRKAG3Q9UGI9 489 aa9.07□□□□□ -0.96
TRPS1-209ENST00000519674 USP20Q9Y2K6 914 aa9.07□□□□□ -0.96
TRPS1-209ENST00000519674 SPO11Q9Y5K1 396 aa9.07□□□□□ -0.96
TRPS1-209ENST00000519674 QSER1Q2KHR3 1735 aa9.07□□□□□ -0.96
TRPS1-209ENST00000519674 FAM196BA6NMK8 535 aa9.07□□□□□ -0.96
TRPS1-209ENST00000519674 MOCS3O95396 460 aa9.07□□□□□ -0.96
TRPS1-209ENST00000519674 LMNAP02545 664 aaKnown RBP9.07□□□□□ -0.96
TRPS1-209ENST00000519674 UBXN1Q04323 297 aa9.07□□□□□ -0.96
TRPS1-209ENST00000519674 TCP10Q12799 353 aa9.07□□□□□ -0.96
TRPS1-209ENST00000519674 TMEM259Q4ZIN3 620 aa9.07□□□□□ -0.96
TRPS1-209ENST00000519674 ASPRV1Q53RT3 343 aa9.07□□□□□ -0.96
TRPS1-209ENST00000519674 CFAP157Q5JU67 520 aa9.07□□□□□ -0.96
TRPS1-209ENST00000519674 MIGA2Q7L4E1 593 aa9.07□□□□□ -0.96
TRPS1-209ENST00000519674 CCDC65Q8IXS2 484 aa9.07□□□□□ -0.96
TRPS1-209ENST00000519674 AGGF1Q8N302 714 aaeCLIP9.07□□□□□ -0.96
TRPS1-209ENST00000519674 ANKLE1Q8NAG6 615 aa9.07□□□□□ -0.96
TRPS1-209ENST00000519674 ZNF507Q8TCN5 953 aa9.07□□□□□ -0.96
TRPS1-209ENST00000519674 AKT1S1Q96B36 256 aa9.07□□□□□ -0.96
TRPS1-209ENST00000519674 PRMT1Q99873 361 aaKnown RBP9.07□□□□□ -0.96
TRPS1-209ENST00000519674 ETNK1Q9HBU6 452 aa9.07□□□□□ -0.96
TRPS1-209ENST00000519674 KBTBD4Q9NVX7 518 aa9.07□□□□□ -0.96
TRPS1-209ENST00000519674 ZNF180Q9UJW8 692 aa9.07□□□□□ -0.96
TRPS1-209ENST00000519674 MYH4Q9Y623 1939 aa9.07□□□□□ -0.96
TRPS1-209ENST00000519674 IGKV6D-41A0A0C4DH26 115 aa9.07□□□□□ -0.96
TRPS1-209ENST00000519674 KCNJ18B7U540 433 aa9.07□□□□□ -0.96
TRPS1-209ENST00000519674 LYNP07948 512 aa9.07□□□□□ -0.96
TRPS1-209ENST00000519674 ETS2P15036 469 aa9.07□□□□□ -0.96
TRPS1-209ENST00000519674 SLC16A2P36021 539 aa9.07□□□□□ -0.96
TRPS1-209ENST00000519674 TXKP42681 527 aa9.07□□□□□ -0.96
TRPS1-209ENST00000519674 CDK7P50613 346 aa9.07□□□□□ -0.96
TRPS1-209ENST00000519674 PMS1P54277 932 aaKnown RBP9.07□□□□□ -0.96
TRPS1-209ENST00000519674 EIF3BP55884 814 aaKnown RBP9.07□□□□□ -0.96
TRPS1-209ENST00000519674 KCNJ12Q14500 433 aa9.07□□□□□ -0.96
TRPS1-209ENST00000519674 SPDYCQ5MJ68 293 aa9.07□□□□□ -0.96
TRPS1-209ENST00000519674 TTBK2Q6IQ55 1244 aa9.07□□□□□ -0.96
TRPS1-209ENST00000519674 GET4Q7L5D6 327 aaPredicted RBP9.07□□□□□ -0.96
TRPS1-209ENST00000519674 ZFPM1Q8IX07 1006 aa9.07□□□□□ -0.96
TRPS1-209ENST00000519674 MB21D1Q8N884 522 aa9.07□□□□□ -0.96
TRPS1-209ENST00000519674 DIS3LQ8TF46 1054 aaKnown RBP9.07□□□□□ -0.96
TRPS1-209ENST00000519674 NAT14Q8WUY8 206 aa9.07□□□□□ -0.96
TRPS1-209ENST00000519674 MASTLQ96GX5 879 aa9.07□□□□□ -0.96
TRPS1-209ENST00000519674 MAML3Q96JK9 1138 aa9.07□□□□□ -0.96
TRPS1-209ENST00000519674 OLFM3Q96PB7 478 aa9.07□□□□□ -0.96
TRPS1-209ENST00000519674 TUBGCP5Q96RT8 1024 aa9.07□□□□□ -0.96
TRPS1-209ENST00000519674 DDX43Q9NXZ2 648 aaKnown RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms