RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 CDCA2Q69YH5 1023 aaPredicted RBP10.34□□□□□ -0.75
HDAC3-215ENST00000519474 RINT1Q6NUQ1 792 aa10.34□□□□□ -0.75
HDAC3-215ENST00000519474 PPP4R3CPQ6ZMV5 832 aa10.34□□□□□ -0.75
HDAC3-215ENST00000519474 C1orf186Q6ZWK4 172 aa10.34□□□□□ -0.75
HDAC3-215ENST00000519474 DDX53Q86TM3 631 aaKnown RBP10.34□□□□□ -0.75
HDAC3-215ENST00000519474 GSTCDQ8NEC7 633 aa10.34□□□□□ -0.75
HDAC3-215ENST00000519474 IPO4Q8TEX9 1081 aaKnown RBP10.34□□□□□ -0.75
HDAC3-215ENST00000519474 BCL7CQ8WUZ0 217 aaPredicted RBP10.34□□□□□ -0.75
HDAC3-215ENST00000519474 RSPH1Q8WYR4 309 aa10.34□□□□□ -0.75
HDAC3-215ENST00000519474 PPP2R3CQ969Q6 453 aa10.34□□□□□ -0.75
HDAC3-215ENST00000519474 CCDC51Q96ER9 411 aa10.34□□□□□ -0.75
HDAC3-215ENST00000519474 CCDC43Q96MW1 224 aaKnown RBP10.34□□□□□ -0.75
HDAC3-215ENST00000519474 PNMA5Q96PV4 448 aa10.34□□□□□ -0.75
HDAC3-215ENST00000519474 GAD1Q99259 594 aa10.34□□□□□ -0.75
HDAC3-215ENST00000519474 TCF25Q9BQ70 676 aa10.34□□□□□ -0.75
HDAC3-215ENST00000519474 RAB34Q9BZG1 259 aa10.34□□□□□ -0.75
HDAC3-215ENST00000519474 UBN1Q9NPG3 1134 aa10.34□□□□□ -0.75
HDAC3-215ENST00000519474 FAN1Q9Y2M0 1017 aa10.34□□□□□ -0.75
HDAC3-215ENST00000519474 GIT1Q9Y2X7 761 aa10.34□□□□□ -0.75
HDAC3-215ENST00000519474 ATG2AQ2TAZ0 1938 aa10.34□□□□□ -0.75
HDAC3-215ENST00000519474 CNTNAP2Q9UHC6 1331 aa10.33□□□□□ -0.76
HDAC3-215ENST00000519474 A0A0C4DFX4 3053 aa10.33□□□□□ -0.76
HDAC3-215ENST00000519474 C2orf71A6NGG8 1288 aa10.33□□□□□ -0.76
HDAC3-215ENST00000519474 ARL5CA6NH57 179 aa10.33□□□□□ -0.76
HDAC3-215ENST00000519474 C19orf67A6NJJ6 358 aa10.33□□□□□ -0.76
HDAC3-215ENST00000519474 SFI1A8K8P3 1242 aa10.33□□□□□ -0.76
HDAC3-215ENST00000519474 ACKR2O00590 384 aa10.33□□□□□ -0.76
HDAC3-215ENST00000519474 NRP1O14786 923 aa10.33□□□□□ -0.76
HDAC3-215ENST00000519474 LILRB3O75022 631 aa10.33□□□□□ -0.76
HDAC3-215ENST00000519474 ZC3H11AO75152 810 aaKnown RBP eCLIP10.33□□□□□ -0.76
HDAC3-215ENST00000519474 NPTXRO95502 500 aa10.33□□□□□ -0.76
HDAC3-215ENST00000519474 AKAP5P24588 427 aa10.33□□□□□ -0.76
HDAC3-215ENST00000519474 PPM1AP35813 382 aa10.33□□□□□ -0.76
HDAC3-215ENST00000519474 NAMPTP43490 491 aa10.33□□□□□ -0.76
HDAC3-215ENST00000519474 RNASELQ05823 741 aaKnown RBP10.33□□□□□ -0.76
HDAC3-215ENST00000519474 COASYQ13057 564 aa10.33□□□□□ -0.76
HDAC3-215ENST00000519474 SMAD2Q15796 467 aaKnown RBP10.33□□□□□ -0.76
HDAC3-215ENST00000519474 NT5DC1Q5TFE4 455 aa10.33□□□□□ -0.76
HDAC3-215ENST00000519474 ARL6IP4Q66PJ3 421 aaKnown RBP10.33□□□□□ -0.76
HDAC3-215ENST00000519474 SLC27A1Q6PCB7 646 aa10.33□□□□□ -0.76
HDAC3-215ENST00000519474 COLGALT2Q8IYK4 626 aa10.33□□□□□ -0.76
HDAC3-215ENST00000519474 DAW1Q8N136 415 aa10.33□□□□□ -0.76
HDAC3-215ENST00000519474 GJD3Q8N144 294 aa10.33□□□□□ -0.76
HDAC3-215ENST00000519474 VPS52Q8N1B4 723 aa10.33□□□□□ -0.76
HDAC3-215ENST00000519474 SYT2Q8N9I0 419 aaPredicted RBP10.33□□□□□ -0.76
HDAC3-215ENST00000519474 PLIN2Q99541 437 aa10.33□□□□□ -0.76
HDAC3-215ENST00000519474 CDCA3Q99618 268 aaPredicted RBP10.33□□□□□ -0.76
HDAC3-215ENST00000519474 TMEM175Q9BSA9 504 aa10.33□□□□□ -0.76
HDAC3-215ENST00000519474 NTPCRQ9BSD7 190 aaKnown RBP10.33□□□□□ -0.76
HDAC3-215ENST00000519474 VN1R3Q9BXE9 311 aa10.33□□□□□ -0.76
HDAC3-215ENST00000519474 CCDC113Q9H0I3 377 aa10.33□□□□□ -0.76
HDAC3-215ENST00000519474 GBP3Q9H0R5 595 aa10.33□□□□□ -0.76
HDAC3-215ENST00000519474 S1PR5Q9H228 398 aa10.33□□□□□ -0.76
HDAC3-215ENST00000519474 PRMT7Q9NVM4 692 aaPredicted RBP10.33□□□□□ -0.76
HDAC3-215ENST00000519474 CD207Q9UJ71 328 aa10.33□□□□□ -0.76
HDAC3-215ENST00000519474 BRWD1Q9NSI6 2320 aa10.33□□□□□ -0.76
HDAC3-215ENST00000519474 VWA3AA6NCI4 1184 aa10.32□□□□□ -0.76
HDAC3-215ENST00000519474 PI4K2BG5E9Z4 385 aa10.32□□□□□ -0.76
HDAC3-215ENST00000519474 CLASP2O75122 1294 aaKnown RBP10.32□□□□□ -0.76
HDAC3-215ENST00000519474 EFEMP2O95967 443 aa10.32□□□□□ -0.76
HDAC3-215ENST00000519474 CTSAP10619 480 aa10.32□□□□□ -0.76
HDAC3-215ENST00000519474 SYT1P21579 422 aa10.32□□□□□ -0.76
HDAC3-215ENST00000519474 NDUFV1P49821 464 aa10.32□□□□□ -0.76
HDAC3-215ENST00000519474 GRIN1Q05586 938 aa10.32□□□□□ -0.76
HDAC3-215ENST00000519474 DSC1Q08554 894 aa10.32□□□□□ -0.76
HDAC3-215ENST00000519474 MAPK7Q13164 816 aa10.32□□□□□ -0.76
HDAC3-215ENST00000519474 EEF1DP3Q658K8 133 aa10.32□□□□□ -0.76
HDAC3-215ENST00000519474 TAS1R1Q7RTX1 841 aa10.32□□□□□ -0.76
HDAC3-215ENST00000519474 ZBTB8OSQ8IWT0 167 aa10.32□□□□□ -0.76
HDAC3-215ENST00000519474 KCTD17Q8N5Z5 321 aa10.32□□□□□ -0.76
HDAC3-215ENST00000519474 URGCPQ8TCY9 931 aa10.32□□□□□ -0.76
HDAC3-215ENST00000519474 AUTS2Q8WXX7 1259 aa10.32□□□□□ -0.76
HDAC3-215ENST00000519474 KIFAP3Q92845 792 aa10.32□□□□□ -0.76
HDAC3-215ENST00000519474 TMEM169Q96HH4 297 aa10.32□□□□□ -0.76
HDAC3-215ENST00000519474 INTS4Q96HW7 963 aaKnown RBP10.32□□□□□ -0.76
HDAC3-215ENST00000519474 IFT74Q96LB3 600 aa10.32□□□□□ -0.76
HDAC3-215ENST00000519474 PRIMPOLQ96LW4 560 aa10.32□□□□□ -0.76
HDAC3-215ENST00000519474 ZFP42Q96MM3 310 aa10.32□□□□□ -0.76
HDAC3-215ENST00000519474 FAM193BQ96PV7 902 aaPredicted RBP10.32□□□□□ -0.76
HDAC3-215ENST00000519474 RUSC1Q9BVN2 902 aa10.32□□□□□ -0.76
HDAC3-215ENST00000519474 ZBP1Q9H171 429 aa10.32□□□□□ -0.76
HDAC3-215ENST00000519474 C2orf40Q9H1Z8 148 aa10.32□□□□□ -0.76
HDAC3-215ENST00000519474 CXCL16Q9H2A7 254 aa10.32□□□□□ -0.76
HDAC3-215ENST00000519474 NXF3Q9H4D5 531 aaKnown RBP10.32□□□□□ -0.76
HDAC3-215ENST00000519474 ENTPD7Q9NQZ7 604 aa10.32□□□□□ -0.76
HDAC3-215ENST00000519474 KLK14Q9P0G3 267 aa10.32□□□□□ -0.76
HDAC3-215ENST00000519474 BARX2Q9UMQ3 279 aaPredicted RBP10.32□□□□□ -0.76
HDAC3-215ENST00000519474 IRAK3Q9Y616 596 aa10.32□□□□□ -0.76
HDAC3-215ENST00000519474 ARID2Q68CP9 1835 aa10.32□□□□□ -0.76
HDAC3-215ENST00000519474 REV3LO60673 3130 aa10.32□□□□□ -0.76
HDAC3-215ENST00000519474 CARNS1A5YM72 827 aa10.31□□□□□ -0.76
HDAC3-215ENST00000519474 K7ERI5 159 aa10.31□□□□□ -0.76
HDAC3-215ENST00000519474 HIP1RO75146 1068 aa10.31□□□□□ -0.76
HDAC3-215ENST00000519474 PRKCBP05771 671 aa10.31□□□□□ -0.76
HDAC3-215ENST00000519474 MLH1P40692 756 aa10.31□□□□□ -0.76
HDAC3-215ENST00000519474 NPTX2P47972 431 aa10.31□□□□□ -0.76
HDAC3-215ENST00000519474 SCNN1GP51170 649 aa10.31□□□□□ -0.76
HDAC3-215ENST00000519474 SLC12A3P55017 1021 aa10.31□□□□□ -0.76
HDAC3-215ENST00000519474 PEX3P56589 373 aa10.31□□□□□ -0.76
HDAC3-215ENST00000519474 SMAD4Q13485 552 aaKnown RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms