RNA–Protein interactions for RNA: ENST00000519132.5

CLK4-202, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,129 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-202ENST00000519132 ARHGAP36Q6ZRI8 547 aa8.27□□□□□ -1.09
CLK4-202ENST00000519132 DEPTORQ8TB45 409 aa8.27□□□□□ -1.09
CLK4-202ENST00000519132 DCAF5Q96JK2 942 aa8.27□□□□□ -1.09
CLK4-202ENST00000519132 BOCQ9BWV1 1114 aa8.27□□□□□ -1.09
CLK4-202ENST00000519132 AP5S1Q9NUS5 200 aa8.27□□□□□ -1.09
CLK4-202ENST00000519132 UBR2Q8IWV8 1755 aa8.26□□□□□ -1.09
CLK4-202ENST00000519132 CYP27B1O15528 508 aa8.26□□□□□ -1.09
CLK4-202ENST00000519132 NMIQ13287 307 aaPredicted RBP8.26□□□□□ -1.09
CLK4-202ENST00000519132 TAF7Q15545 349 aaPredicted RBP8.26□□□□□ -1.09
CLK4-202ENST00000519132 NOSTRINQ8IVI9 506 aa8.26□□□□□ -1.09
CLK4-202ENST00000519132 KLHL23Q8NBE8 558 aa8.26□□□□□ -1.09
CLK4-202ENST00000519132 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.26□□□□□ -1.09
CLK4-202ENST00000519132 SORBS1Q9BX66 1292 aaKnown RBP8.26□□□□□ -1.09
CLK4-202ENST00000519132 FBLN5Q9UBX5 448 aa8.26□□□□□ -1.09
CLK4-202ENST00000519132 SLC45A1Q9Y2W3 748 aa8.26□□□□□ -1.09
CLK4-202ENST00000519132 NR2E3Q9Y5X4 410 aa8.26□□□□□ -1.09
CLK4-202ENST00000519132 PES1O00541 588 aaKnown RBP8.26□□□□□ -1.09
CLK4-202ENST00000519132 SIGLEC6O43699 453 aa8.26□□□□□ -1.09
CLK4-202ENST00000519132 LRIG2O94898 1065 aa8.26□□□□□ -1.09
CLK4-202ENST00000519132 CBX7O95931 251 aa8.26□□□□□ -1.09
CLK4-202ENST00000519132 SNRPBP14678 240 aaKnown RBP8.26□□□□□ -1.09
CLK4-202ENST00000519132 EXOSC9Q06265 439 aaKnown RBP8.26□□□□□ -1.09
CLK4-202ENST00000519132 LAPTM5Q13571 262 aa8.26□□□□□ -1.09
CLK4-202ENST00000519132 FAM47CQ5HY64 1035 aa8.26□□□□□ -1.09
CLK4-202ENST00000519132 CFAP161Q6P656 301 aa8.26□□□□□ -1.09
CLK4-202ENST00000519132 KAT5Q92993 513 aa8.26□□□□□ -1.09
CLK4-202ENST00000519132 PCIF1Q9H4Z3 704 aa8.26□□□□□ -1.09
CLK4-202ENST00000519132 RABGAP1Q9Y3P9 1069 aa8.26□□□□□ -1.09
CLK4-202ENST00000519132 J3KRW8 73 aa8.25□□□□□ -1.09
CLK4-202ENST00000519132 LEFTY1O75610 366 aa8.25□□□□□ -1.09
CLK4-202ENST00000519132 PDIA3P30101 505 aaKnown RBP8.25□□□□□ -1.09
CLK4-202ENST00000519132 COL9A3Q14050 684 aaPredicted RBP8.25□□□□□ -1.09
CLK4-202ENST00000519132 CDC37Q16543 378 aaPredicted RBP8.25□□□□□ -1.09
CLK4-202ENST00000519132 KIZQ2M2Z5 673 aa8.25□□□□□ -1.09
CLK4-202ENST00000519132 KCNK18Q7Z418 384 aa8.25□□□□□ -1.09
CLK4-202ENST00000519132 GPR161Q8N6U8 529 aaKnown RBP8.25□□□□□ -1.09
CLK4-202ENST00000519132 ALG13Q9NP73 1137 aaKnown RBP8.25□□□□□ -1.09
CLK4-202ENST00000519132 GLI3P10071 1580 aa8.25□□□□□ -1.09
CLK4-202ENST00000519132 KIF1CO43896 1103 aaKnown RBP8.25□□□□□ -1.09
CLK4-202ENST00000519132 ALX3O95076 343 aa8.25□□□□□ -1.09
CLK4-202ENST00000519132 IPO7O95373 1038 aaKnown RBP8.25□□□□□ -1.09
CLK4-202ENST00000519132 POLBP06746 335 aa8.25□□□□□ -1.09
CLK4-202ENST00000519132 IFIT1P09914 478 aaKnown RBP8.25□□□□□ -1.09
CLK4-202ENST00000519132 NAP1L1P55209 391 aaKnown RBP8.25□□□□□ -1.09
CLK4-202ENST00000519132 IL10RAQ13651 578 aa8.25□□□□□ -1.09
CLK4-202ENST00000519132 RNFT1Q5M7Z0 435 aa8.25□□□□□ -1.09
CLK4-202ENST00000519132 ACAD11Q709F0 780 aa8.25□□□□□ -1.09
CLK4-202ENST00000519132 OTOP1Q7RTM1 612 aa8.25□□□□□ -1.09
CLK4-202ENST00000519132 FRAT1Q92837 279 aaPredicted RBP8.25□□□□□ -1.09
CLK4-202ENST00000519132 SLC12A9Q9BXP2 914 aa8.25□□□□□ -1.09
CLK4-202ENST00000519132 ABCF2Q9UG63 623 aa8.25□□□□□ -1.09
CLK4-202ENST00000519132 DPP7Q9UHL4 492 aa8.25□□□□□ -1.09
CLK4-202ENST00000519132 KRT85P78386 507 aa8.25□□□□□ -1.09
CLK4-202ENST00000519132 SOX4Q06945 474 aaPredicted RBP8.25□□□□□ -1.09
CLK4-202ENST00000519132 TRIM25Q14258 630 aaKnown RBP8.25□□□□□ -1.09
CLK4-202ENST00000519132 CLEC16AQ2KHT3 1053 aa8.25□□□□□ -1.09
CLK4-202ENST00000519132 ALDH1L2Q3SY69 923 aa8.25□□□□□ -1.09
CLK4-202ENST00000519132 C2CD4AQ8NCU7 369 aaPredicted RBP8.25□□□□□ -1.09
CLK4-202ENST00000519132 DPF3Q92784 378 aa8.25□□□□□ -1.09
CLK4-202ENST00000519132 WNT8BQ93098 351 aa8.25□□□□□ -1.09
CLK4-202ENST00000519132 ATP6V0A4Q9HBG4 840 aa8.25□□□□□ -1.09
CLK4-202ENST00000519132 ZNF277Q9NRM2 450 aaPredicted RBP8.25□□□□□ -1.09
CLK4-202ENST00000519132 DONSONQ9NYP3 566 aa8.25□□□□□ -1.09
CLK4-202ENST00000519132 SNX13Q9Y5W8 968 aa8.25□□□□□ -1.09
CLK4-202ENST00000519132 ATRNO75882 1429 aa8.24□□□□□ -1.09
CLK4-202ENST00000519132 ENPP1P22413 925 aa8.24□□□□□ -1.09
CLK4-202ENST00000519132 RARSP54136 660 aaKnown RBP8.24□□□□□ -1.09
CLK4-202ENST00000519132 RRP1P56182 461 aaKnown RBP8.24□□□□□ -1.09
CLK4-202ENST00000519132 POU4F1Q01851 419 aa8.24□□□□□ -1.09
CLK4-202ENST00000519132 TEFQ10587 303 aa8.24□□□□□ -1.09
CLK4-202ENST00000519132 HIBCHQ6NVY1 386 aaPredicted RBP8.24□□□□□ -1.09
CLK4-202ENST00000519132 APOA5Q6Q788 366 aa8.24□□□□□ -1.09
CLK4-202ENST00000519132 KIAA0319LQ8IZA0 1049 aa8.24□□□□□ -1.09
CLK4-202ENST00000519132 ZNF610Q8N9Z0 462 aa8.24□□□□□ -1.09
CLK4-202ENST00000519132 C22orf23Q9BZE7 217 aa8.24□□□□□ -1.09
CLK4-202ENST00000519132 TMEM60Q9H2L4 133 aa8.24□□□□□ -1.09
CLK4-202ENST00000519132 ATXN3LQ9H3M9 355 aa8.24□□□□□ -1.09
CLK4-202ENST00000519132 DOT1LQ8TEK3 1739 aa8.24□□□□□ -1.09
CLK4-202ENST00000519132 LAMB4A4D0S4 1761 aa8.24□□□□□ -1.09
CLK4-202ENST00000519132 POM121BA6NF01 834 aa8.24□□□□□ -1.09
CLK4-202ENST00000519132 CCDC154A6NI56 674 aa8.24□□□□□ -1.09
CLK4-202ENST00000519132 RHPN2P1A8MT19 583 aa8.24□□□□□ -1.09
CLK4-202ENST00000519132 NFICP08651 508 aa8.24□□□□□ -1.09
CLK4-202ENST00000519132 TUBP50607 506 aa8.24□□□□□ -1.09
CLK4-202ENST00000519132 CASP5P51878 434 aa8.24□□□□□ -1.09
CLK4-202ENST00000519132 FAM26FQ5R3K3 315 aa8.24□□□□□ -1.09
CLK4-202ENST00000519132 MFSD4BQ5TF39 518 aa8.24□□□□□ -1.09
CLK4-202ENST00000519132 SRGAP1Q7Z6B7 1085 aa8.24□□□□□ -1.09
CLK4-202ENST00000519132 FAM26EQ8N5C1 309 aa8.24□□□□□ -1.09
CLK4-202ENST00000519132 TTC9Q92623 222 aa8.24□□□□□ -1.09
CLK4-202ENST00000519132 NELL1Q92832 810 aa8.24□□□□□ -1.09
CLK4-202ENST00000519132 ERCC4Q92889 916 aaPredicted RBP8.24□□□□□ -1.09
CLK4-202ENST00000519132 FBXL18Q96ME1 805 aa8.24□□□□□ -1.09
CLK4-202ENST00000519132 TSPYL4Q9UJ04 414 aa8.24□□□□□ -1.09
CLK4-202ENST00000519132 JAG2Q9Y219 1238 aa8.24□□□□□ -1.09
CLK4-202ENST00000519132 ERVV-2B6SEH9 535 aa8.23□□□□□ -1.09
CLK4-202ENST00000519132 FAM229AH3BQW9 127 aa8.23□□□□□ -1.09
CLK4-202ENST00000519132 MAN2B1O00754 1011 aa8.23□□□□□ -1.09
CLK4-202ENST00000519132 NCAM2O15394 837 aa8.23□□□□□ -1.09
CLK4-202ENST00000519132 GSTM1P09488 218 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms