RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 GLB1LQ6UWU2 654 aa14.69□□□□□ -0.06
VEGFA-219ENST00000518824 GSTCDQ8NEC7 633 aa14.69□□□□□ -0.06
VEGFA-219ENST00000518824 SYMPKQ92797 1274 aaKnown RBP14.69□□□□□ -0.06
VEGFA-219ENST00000518824 HLA-CQ95604 372 aa14.69□□□□□ -0.06
VEGFA-219ENST00000518824 PGBD4Q96DM1 585 aa14.69□□□□□ -0.06
VEGFA-219ENST00000518824 CDK5RAP3Q96JB5 506 aa14.69□□□□□ -0.06
VEGFA-219ENST00000518824 IFT74Q96LB3 600 aa14.69□□□□□ -0.06
VEGFA-219ENST00000518824 ZNF558Q96NG5 402 aa14.69□□□□□ -0.06
VEGFA-219ENST00000518824 NECAB3Q96P71 396 aaPredicted RBP14.69□□□□□ -0.06
VEGFA-219ENST00000518824 ASB2Q96Q27 587 aa14.69□□□□□ -0.06
VEGFA-219ENST00000518824 CCSER1Q9C0I3 900 aa14.69□□□□□ -0.06
VEGFA-219ENST00000518824 NT5C3AQ9H0P0 336 aa14.69□□□□□ -0.06
VEGFA-219ENST00000518824 ZSCAN16Q9H4T2 348 aaPredicted RBP14.69□□□□□ -0.06
VEGFA-219ENST00000518824 IGFLR1Q9H665 355 aa14.69□□□□□ -0.06
VEGFA-219ENST00000518824 UBE2ZQ9H832 354 aaPredicted RBP14.69□□□□□ -0.06
VEGFA-219ENST00000518824 AAASQ9NRG9 546 aa14.69□□□□□ -0.06
VEGFA-219ENST00000518824 CACNG4Q9UBN1 327 aa14.69□□□□□ -0.06
VEGFA-219ENST00000518824 XIRP2A4UGR9 3374 aa14.68□□□□□ -0.06
VEGFA-219ENST00000518824 F8W810 466 aa14.68□□□□□ -0.06
VEGFA-219ENST00000518824 ACKR2O00590 384 aa14.68□□□□□ -0.06
VEGFA-219ENST00000518824 SLC16A4O15374 487 aa14.68□□□□□ -0.06
VEGFA-219ENST00000518824 HSP90AA1P07900 732 aaKnown RBP14.68□□□□□ -0.06
VEGFA-219ENST00000518824 GALTP07902 379 aa14.68□□□□□ -0.06
VEGFA-219ENST00000518824 ZSCAN22P10073 491 aaPredicted RBP14.68□□□□□ -0.06
VEGFA-219ENST00000518824 GUCY2CP25092 1073 aa14.68□□□□□ -0.06
VEGFA-219ENST00000518824 LTBRP36941 435 aa14.68□□□□□ -0.06
VEGFA-219ENST00000518824 SLC11A1P49279 550 aa14.68□□□□□ -0.06
VEGFA-219ENST00000518824 NASPP49321 788 aaPredicted RBP14.68□□□□□ -0.06
VEGFA-219ENST00000518824 SCNN1GP51170 649 aa14.68□□□□□ -0.06
VEGFA-219ENST00000518824 PRPF4BQ13523 1007 aaKnown RBP14.68□□□□□ -0.06
VEGFA-219ENST00000518824 PPP2R5AQ15172 486 aa14.68□□□□□ -0.06
VEGFA-219ENST00000518824 PCBP1Q15365 356 aaKnown RBP eCLIP14.68□□□□□ -0.064e-7■■□□□ 11.7
VEGFA-219ENST00000518824 MAPK6Q16659 721 aa14.68□□□□□ -0.06
VEGFA-219ENST00000518824 SLC27A1Q6PCB7 646 aa14.68□□□□□ -0.06
VEGFA-219ENST00000518824 RBM23Q86U06 439 aaKnown RBP14.68□□□□□ -0.06
VEGFA-219ENST00000518824 GPBP1Q86WP2 473 aa14.68□□□□□ -0.06
VEGFA-219ENST00000518824 LINC00301Q8NCQ3 95 aa14.68□□□□□ -0.06
VEGFA-219ENST00000518824 ATXN2LQ8WWM7 1075 aaKnown RBP14.68□□□□□ -0.06
VEGFA-219ENST00000518824 RAD54LQ92698 747 aa14.68□□□□□ -0.06
VEGFA-219ENST00000518824 CCDC51Q96ER9 411 aa14.68□□□□□ -0.06
VEGFA-219ENST00000518824 CALML4Q96GE6 196 aa14.68□□□□□ -0.06
VEGFA-219ENST00000518824 VN1R3Q9BXE9 311 aa14.68□□□□□ -0.06
VEGFA-219ENST00000518824 C2orf40Q9H1Z8 148 aa14.68□□□□□ -0.06
VEGFA-219ENST00000518824 ARHGAP28Q9P2N2 729 aa14.68□□□□□ -0.06
VEGFA-219ENST00000518824 ZDHHC9Q9Y397 364 aa14.68□□□□□ -0.06
VEGFA-219ENST00000518824 TDRD15B5MCY1 1934 aaKnown RBP14.68□□□□□ -0.06
VEGFA-219ENST00000518824 A0A0C4DFX4 3053 aa14.67□□□□□ -0.06
VEGFA-219ENST00000518824 ARL5CA6NH57 179 aa14.67□□□□□ -0.06
VEGFA-219ENST00000518824 H3BQ06 376 aaPredicted RBP14.67□□□□□ -0.06
VEGFA-219ENST00000518824 DLL1O00548 723 aa14.67□□□□□ -0.06
VEGFA-219ENST00000518824 FSCN2O14926 492 aa14.67□□□□□ -0.06
VEGFA-219ENST00000518824 PER2O15055 1255 aa14.67□□□□□ -0.06
VEGFA-219ENST00000518824 F13A1P00488 732 aa14.67□□□□□ -0.06
VEGFA-219ENST00000518824 BMP1P13497 986 aa14.67□□□□□ -0.06
VEGFA-219ENST00000518824 KCNA5P22460 613 aa14.67□□□□□ -0.06
VEGFA-219ENST00000518824 MRPS5P82675 430 aaKnown RBP14.67□□□□□ -0.06
VEGFA-219ENST00000518824 PLCB3Q01970 1234 aa14.67□□□□□ -0.06
VEGFA-219ENST00000518824 COL19A1Q14993 1142 aa14.67□□□□□ -0.06
VEGFA-219ENST00000518824 TJAP1Q5JTD0 557 aa14.67□□□□□ -0.06
VEGFA-219ENST00000518824 PLPP4Q5VZY2 271 aa14.67□□□□□ -0.06
VEGFA-219ENST00000518824 EP400NLQ6ZTU2 488 aa14.67□□□□□ -0.06
VEGFA-219ENST00000518824 CEP120Q8N960 986 aa14.67□□□□□ -0.06
VEGFA-219ENST00000518824 MRPS27Q92552 414 aaKnown RBP14.67□□□□□ -0.06
VEGFA-219ENST00000518824 RABGGTAQ92696 567 aa14.67□□□□□ -0.06
VEGFA-219ENST00000518824 ZBTB45Q96K62 511 aaPredicted RBP14.67□□□□□ -0.06
VEGFA-219ENST00000518824 PRIMPOLQ96LW4 560 aa14.67□□□□□ -0.06
VEGFA-219ENST00000518824 REEP2Q9BRK0 252 aa14.67□□□□□ -0.06
VEGFA-219ENST00000518824 TARS2Q9BW92 718 aaKnown RBP14.67□□□□□ -0.06
VEGFA-219ENST00000518824 MRPL9Q9BYD2 267 aaKnown RBP14.67□□□□□ -0.06
VEGFA-219ENST00000518824 PANK2Q9BZ23 570 aa14.67□□□□□ -0.06
VEGFA-219ENST00000518824 KMT5AQ9NQR1 393 aa14.67□□□□□ -0.06
VEGFA-219ENST00000518824 TLR9Q9NR96 1032 aa14.67□□□□□ -0.06
VEGFA-219ENST00000518824 SNTG2Q9NY99 539 aa14.67□□□□□ -0.06
VEGFA-219ENST00000518824 SPG21Q9NZD8 308 aa14.67□□□□□ -0.06
VEGFA-219ENST00000518824 TRIP11Q15643 1979 aa14.67□□□□□ -0.06
VEGFA-219ENST00000518824 VCANP13611 3396 aa14.66□□□□□ -0.06
VEGFA-219ENST00000518824 HIDE1A8MVS5 230 aa14.66□□□□□ -0.06
VEGFA-219ENST00000518824 K7ERI5 159 aa14.66□□□□□ -0.06
VEGFA-219ENST00000518824 INPPL1O15357 1258 aa14.66□□□□□ -0.06
VEGFA-219ENST00000518824 TBX10O75333 385 aa14.66□□□□□ -0.06
VEGFA-219ENST00000518824 PLS3P13797 630 aa14.66□□□□□ -0.06
VEGFA-219ENST00000518824 RNASELQ05823 741 aaKnown RBP14.66□□□□□ -0.06
VEGFA-219ENST00000518824 NCBP1Q09161 790 aaKnown RBP14.66□□□□□ -0.06
VEGFA-219ENST00000518824 DMP1Q13316 513 aaPredicted RBP14.66□□□□□ -0.06
VEGFA-219ENST00000518824 GIT2Q14161 759 aa14.66□□□□□ -0.06
VEGFA-219ENST00000518824 STK38Q15208 465 aa14.66□□□□□ -0.06
VEGFA-219ENST00000518824 CTC1Q2NKJ3 1217 aa14.66□□□□□ -0.06
VEGFA-219ENST00000518824 ATF7IP2Q5U623 682 aa14.66□□□□□ -0.06
VEGFA-219ENST00000518824 CNNM3Q8NE01 707 aa14.66□□□□□ -0.06
VEGFA-219ENST00000518824 VN1R2Q8NFZ6 395 aa14.66□□□□□ -0.06
VEGFA-219ENST00000518824 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.66□□□□□ -0.06
VEGFA-219ENST00000518824 MICAL1Q8TDZ2 1067 aa14.66□□□□□ -0.06
VEGFA-219ENST00000518824 AUTS2Q8WXX7 1259 aa14.66□□□□□ -0.06
VEGFA-219ENST00000518824 DRC1Q96MC2 740 aa14.66□□□□□ -0.06
VEGFA-219ENST00000518824 ACO2Q99798 780 aaKnown RBP14.66□□□□□ -0.06
VEGFA-219ENST00000518824 TRIM6Q9C030 488 aaPredicted RBP14.66□□□□□ -0.06
VEGFA-219ENST00000518824 CLDND1Q9NY35 253 aa14.66□□□□□ -0.06
VEGFA-219ENST00000518824 DAXXQ9UER7 740 aaPredicted RBP14.66□□□□□ -0.06
VEGFA-219ENST00000518824 PARP2Q9UGN5 583 aa14.66□□□□□ -0.06
VEGFA-219ENST00000518824 COG5Q9UP83 839 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms