RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 COQ8BQ96D53 544 aa0.12□□□□□ -2.39
RNU6-542P-201ENST00000516405 RNF31Q96EP0 1072 aa0.12□□□□□ -2.39
RNU6-542P-201ENST00000516405 PYGO2Q9BRQ0 406 aa0.12□□□□□ -2.39
RNU6-542P-201ENST00000516405 TRAF4Q9BUZ4 470 aaPredicted RBP0.12□□□□□ -2.39
RNU6-542P-201ENST00000516405 JAM3Q9BX67 310 aa0.12□□□□□ -2.39
RNU6-542P-201ENST00000516405 EHMT1Q9H9B1 1298 aa0.12□□□□□ -2.39
RNU6-542P-201ENST00000516405 MLXIPQ9HAP2 919 aa0.12□□□□□ -2.39
RNU6-542P-201ENST00000516405 BRMS1Q9HCU9 246 aa0.12□□□□□ -2.39
RNU6-542P-201ENST00000516405 INCENPQ9NQS7 918 aa0.12□□□□□ -2.39
RNU6-542P-201ENST00000516405 GALNT8Q9NY28 637 aa0.12□□□□□ -2.39
RNU6-542P-201ENST00000516405 VWA7Q9Y334 891 aa0.12□□□□□ -2.39
RNU6-542P-201ENST00000516405 SQORQ9Y6N5 450 aa0.12□□□□□ -2.39
RNU6-542P-201ENST00000516405 FPGT-TNNI3KV9GXZ4 949 aa0.12□□□□□ -2.39
RNU6-542P-201ENST00000516405 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP0.11□□□□□ -2.39
RNU6-542P-201ENST00000516405 DIRC3C9JPN6 131 aa0.11□□□□□ -2.39
RNU6-542P-201ENST00000516405 E5RJQ4 531 aa0.11□□□□□ -2.39
RNU6-542P-201ENST00000516405 ACOT8O14734 319 aa0.11□□□□□ -2.39
RNU6-542P-201ENST00000516405 TOX4O94842 621 aa0.11□□□□□ -2.39
RNU6-542P-201ENST00000516405 DNAH10OSP0CZ25 163 aa0.11□□□□□ -2.39
RNU6-542P-201ENST00000516405 ZNF10P21506 573 aaPredicted RBP0.11□□□□□ -2.39
RNU6-542P-201ENST00000516405 MC4RP32245 332 aa0.11□□□□□ -2.39
RNU6-542P-201ENST00000516405 RRP1P56182 461 aaKnown RBP0.11□□□□□ -2.39
RNU6-542P-201ENST00000516405 LMO4P61968 165 aa0.11□□□□□ -2.39
RNU6-542P-201ENST00000516405 GRB10Q13322 594 aa0.11□□□□□ -2.39
RNU6-542P-201ENST00000516405 LSAMPQ13449 338 aa0.11□□□□□ -2.39
RNU6-542P-201ENST00000516405 BFSP2Q13515 415 aa0.11□□□□□ -2.39
RNU6-542P-201ENST00000516405 RBMS2Q15434 407 aaKnown RBP0.11□□□□□ -2.39
RNU6-542P-201ENST00000516405 DIEXFQ68CQ4 756 aaKnown RBP0.11□□□□□ -2.39
RNU6-542P-201ENST00000516405 ZNF772Q68DY9 489 aaPredicted RBP0.11□□□□□ -2.39
RNU6-542P-201ENST00000516405 GRAMD4Q6IC98 578 aa0.11□□□□□ -2.39
RNU6-542P-201ENST00000516405 KLHDC10Q6PID8 442 aa0.11□□□□□ -2.39
RNU6-542P-201ENST00000516405 LVRNQ6Q4G3 990 aa0.11□□□□□ -2.39
RNU6-542P-201ENST00000516405 PNPLA5Q7Z6Z6 429 aaPredicted RBP0.11□□□□□ -2.39
RNU6-542P-201ENST00000516405 DAAM2Q86T65 1068 aa0.11□□□□□ -2.39
RNU6-542P-201ENST00000516405 PEG10Q86TG7 708 aaKnown RBP0.11□□□□□ -2.39
RNU6-542P-201ENST00000516405 CNGA4Q8IV77 575 aa0.11□□□□□ -2.39
RNU6-542P-201ENST00000516405 CMTM4Q8IZR5 234 aa0.11□□□□□ -2.39
RNU6-542P-201ENST00000516405 ARHGEF39Q8N4T4 335 aa0.11□□□□□ -2.39
RNU6-542P-201ENST00000516405 SLC7A14Q8TBB6 771 aa0.11□□□□□ -2.39
RNU6-542P-201ENST00000516405 GCDHQ92947 438 aaPredicted RBP0.11□□□□□ -2.39
RNU6-542P-201ENST00000516405 NEU1Q99519 415 aa0.11□□□□□ -2.39
RNU6-542P-201ENST00000516405 EGFL8Q99944 293 aa0.11□□□□□ -2.39
RNU6-542P-201ENST00000516405 PDCD2LQ9BRP1 358 aa0.11□□□□□ -2.39
RNU6-542P-201ENST00000516405 AARSD1Q9BTE6 412 aaKnown RBP0.11□□□□□ -2.39
RNU6-542P-201ENST00000516405 BTBD2Q9BX70 525 aa0.11□□□□□ -2.39
RNU6-542P-201ENST00000516405 AMNQ9BXJ7 453 aa0.11□□□□□ -2.39
RNU6-542P-201ENST00000516405 SLC7A10Q9NS82 523 aa0.11□□□□□ -2.39
RNU6-542P-201ENST00000516405 KCTD5Q9NXV2 234 aa0.11□□□□□ -2.39
RNU6-542P-201ENST00000516405 CLDND1Q9NY35 253 aa0.11□□□□□ -2.39
RNU6-542P-201ENST00000516405 SELENONQ9NZV5 590 aa0.11□□□□□ -2.39
RNU6-542P-201ENST00000516405 WHRNQ9P202 907 aa0.11□□□□□ -2.39
RNU6-542P-201ENST00000516405 PCDHA2Q9Y5H9 948 aa0.11□□□□□ -2.39
RNU6-542P-201ENST00000516405 MEIS3P2A8K0S8 358 aa0.1□□□□□ -2.39
RNU6-542P-201ENST00000516405 H3BRB1 525 aa0.1□□□□□ -2.39
RNU6-542P-201ENST00000516405 SYT5O00445 386 aa0.1□□□□□ -2.39
RNU6-542P-201ENST00000516405 TLR3O15455 904 aaKnown RBP0.1□□□□□ -2.39
RNU6-542P-201ENST00000516405 EXTL3O43909 919 aa0.1□□□□□ -2.39
RNU6-542P-201ENST00000516405 DNAJC6O75061 913 aa0.1□□□□□ -2.39
RNU6-542P-201ENST00000516405 MPIG6BO95866 241 aa0.1□□□□□ -2.39
RNU6-542P-201ENST00000516405 PRB2P02812 416 aaPredicted RBP0.1□□□□□ -2.39
RNU6-542P-201ENST00000516405 VSIG10L2P0DP72 767 aa0.1□□□□□ -2.39
RNU6-542P-201ENST00000516405 PSG1P11464 419 aa0.1□□□□□ -2.39
RNU6-542P-201ENST00000516405 UBTFP17480 764 aaKnown RBP0.1□□□□□ -2.39
RNU6-542P-201ENST00000516405 PTGS1P23219 599 aa0.1□□□□□ -2.39
RNU6-542P-201ENST00000516405 GAS1P54826 345 aa0.1□□□□□ -2.39
RNU6-542P-201ENST00000516405 CLCQ05315 142 aa0.1□□□□□ -2.39
RNU6-542P-201ENST00000516405 RAB33AQ14088 237 aa0.1□□□□□ -2.39
RNU6-542P-201ENST00000516405 TCEAL1Q15170 157 aa0.1□□□□□ -2.39
RNU6-542P-201ENST00000516405 NFE2Q16621 373 aaPredicted RBP0.1□□□□□ -2.39
RNU6-542P-201ENST00000516405 XKR6Q5GH73 641 aa0.1□□□□□ -2.39
RNU6-542P-201ENST00000516405 FAM76BQ5HYJ3 339 aa0.1□□□□□ -2.39
RNU6-542P-201ENST00000516405 FAM102AQ5T9C2 384 aaPredicted RBP0.1□□□□□ -2.39
RNU6-542P-201ENST00000516405 B3GNTL1Q67FW5 361 aaPredicted RBP0.1□□□□□ -2.39
RNU6-542P-201ENST00000516405 INTS3Q68E01 1043 aaKnown RBP0.1□□□□□ -2.39
RNU6-542P-201ENST00000516405 SUMO4Q6EEV6 95 aa0.1□□□□□ -2.39
RNU6-542P-201ENST00000516405 IQCEQ6IPM2 695 aa0.1□□□□□ -2.39
RNU6-542P-201ENST00000516405 RBM23Q86U06 439 aaKnown RBP0.1□□□□□ -2.39
RNU6-542P-201ENST00000516405 GLB1L3Q8NCI6 653 aaPredicted RBP0.1□□□□□ -2.39
RNU6-542P-201ENST00000516405 PRSS3P2Q8NHM4 247 aa0.1□□□□□ -2.39
RNU6-542P-201ENST00000516405 UHMK1Q8TAS1 419 aaKnown RBP0.1□□□□□ -2.39
RNU6-542P-201ENST00000516405 PIGOQ8TEQ8 1089 aa0.1□□□□□ -2.39
RNU6-542P-201ENST00000516405 IGFBPL1Q8WX77 278 aa0.1□□□□□ -2.39
RNU6-542P-201ENST00000516405 CHAMP1Q96JM3 812 aa0.1□□□□□ -2.39
RNU6-542P-201ENST00000516405 RBCK1Q9BYM8 510 aa0.1□□□□□ -2.39
RNU6-542P-201ENST00000516405 TUT1Q9H6E5 874 aaKnown RBP0.1□□□□□ -2.39
RNU6-542P-201ENST00000516405 TBCCD1Q9NVR7 557 aa0.1□□□□□ -2.39
RNU6-542P-201ENST00000516405 ARHGAP28Q9P2N2 729 aa0.1□□□□□ -2.39
RNU6-542P-201ENST00000516405 NCDNQ9UBB6 729 aa0.1□□□□□ -2.39
RNU6-542P-201ENST00000516405 PADI4Q9UM07 663 aa0.1□□□□□ -2.39
RNU6-542P-201ENST00000516405 ADAMTS5Q9UNA0 930 aa0.1□□□□□ -2.39
RNU6-542P-201ENST00000516405 EFR3BQ9Y2G0 817 aa0.1□□□□□ -2.39
RNU6-542P-201ENST00000516405 SRRM3A6NNA2 597 aaPredicted RBP0.09□□□□□ -2.4
RNU6-542P-201ENST00000516405 B4DGG1 531 aa0.09□□□□□ -2.4
RNU6-542P-201ENST00000516405 TARM1B6A8C7 271 aa0.09□□□□□ -2.4
RNU6-542P-201ENST00000516405 ADAMTS3O15072 1205 aa0.09□□□□□ -2.4
RNU6-542P-201ENST00000516405 NKRFO15226 690 aaKnown RBP eCLIP0.09□□□□□ -2.4
RNU6-542P-201ENST00000516405 H2AFYO75367 372 aaKnown RBP0.09□□□□□ -2.4
RNU6-542P-201ENST00000516405 BCAR3O75815 825 aa0.09□□□□□ -2.4
RNU6-542P-201ENST00000516405 SP1P08047 785 aa0.09□□□□□ -2.4
RNU6-542P-201ENST00000516405 HNRNPA1P09651 372 aaKnown RBP eCLIP0.09□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms