RNA–Protein interactions for RNA: ENST00000515996.1

SCARNA21.1-201, small Cajal body-specific RNA 21, humanhuman

BASIC

Gene SCARNA21, Length 128 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA21.1-201ENST00000515996 MYO18BQ8IUG5 2567 aa0.09□□□□□ -2.4
SCARNA21.1-201ENST00000515996 OTOGQ6ZRI0 2925 aa0.09□□□□□ -2.4
SCARNA21.1-201ENST00000515996 ZNF292O60281 2723 aa0.08□□□□□ -2.4
SCARNA21.1-201ENST00000515996 MUC6Q6W4X9 2439 aa0.08□□□□□ -2.4
SCARNA21.1-201ENST00000515996 UBR5O95071 2799 aaPredicted RBP0.08□□□□□ -2.4
SCARNA21.1-201ENST00000515996 MAP1BP46821 2468 aaKnown RBP0.08□□□□□ -2.4
SCARNA21.1-201ENST00000515996 ZANQ9Y493 2812 aa0.08□□□□□ -2.4
SCARNA21.1-201ENST00000515996 CACNA1HO95180 2353 aa0.08□□□□□ -2.4
SCARNA21.1-201ENST00000515996 PRR23AA6NEV1 266 aa0.08□□□□□ -2.4
SCARNA21.1-201ENST00000515996 SRRM3A6NNA2 597 aaPredicted RBP0.08□□□□□ -2.4
SCARNA21.1-201ENST00000515996 NDUFB5O43674 189 aa0.08□□□□□ -2.4
SCARNA21.1-201ENST00000515996 LDB3O75112 727 aa0.08□□□□□ -2.4
SCARNA21.1-201ENST00000515996 VAMP4O75379 141 aa0.08□□□□□ -2.4
SCARNA21.1-201ENST00000515996 DGKIO75912 1065 aa0.08□□□□□ -2.4
SCARNA21.1-201ENST00000515996 TUBB4AP04350 444 aa0.08□□□□□ -2.4
SCARNA21.1-201ENST00000515996 ITGA4P13612 1032 aa0.08□□□□□ -2.4
SCARNA21.1-201ENST00000515996 PRF1P14222 555 aa0.08□□□□□ -2.4
SCARNA21.1-201ENST00000515996 CD247P20963 164 aa0.08□□□□□ -2.4
SCARNA21.1-201ENST00000515996 LMO4P61968 165 aa0.08□□□□□ -2.4
SCARNA21.1-201ENST00000515996 TRIM25Q14258 630 aaKnown RBP0.08□□□□□ -2.4
SCARNA21.1-201ENST00000515996 ZNF618Q5T7W0 954 aa0.08□□□□□ -2.4
SCARNA21.1-201ENST00000515996 CYP4F22Q6NT55 531 aa0.08□□□□□ -2.4
SCARNA21.1-201ENST00000515996 SERINC5Q86VE9 423 aa0.08□□□□□ -2.4
SCARNA21.1-201ENST00000515996 MSL3Q8N5Y2 521 aaKnown RBP0.08□□□□□ -2.4
SCARNA21.1-201ENST00000515996 B4GALNT2Q8NHY0 566 aa0.08□□□□□ -2.4
SCARNA21.1-201ENST00000515996 LPPQ93052 612 aa0.08□□□□□ -2.4
SCARNA21.1-201ENST00000515996 SLC7A6OSQ96CW6 309 aaPredicted RBP0.08□□□□□ -2.4
SCARNA21.1-201ENST00000515996 ATG4CQ96DT6 458 aa0.08□□□□□ -2.4
SCARNA21.1-201ENST00000515996 CPPED1Q9BRF8 314 aaPredicted RBP0.08□□□□□ -2.4
SCARNA21.1-201ENST00000515996 TMEM204Q9BSN7 226 aa0.08□□□□□ -2.4
SCARNA21.1-201ENST00000515996 ANO2Q9NQ90 1003 aa0.08□□□□□ -2.4
SCARNA21.1-201ENST00000515996 NCKIPSDQ9NZQ3 722 aa0.08□□□□□ -2.4
SCARNA21.1-201ENST00000515996 WDR3Q9UNX4 943 aaKnown RBP eCLIP0.08□□□□□ -2.4
SCARNA21.1-201ENST00000515996 TIMM13Q9Y5L4 95 aaPredicted RBP0.08□□□□□ -2.4
SCARNA21.1-201ENST00000515996 RBM8AQ9Y5S9 174 aaKnown RBP0.08□□□□□ -2.4
SCARNA21.1-201ENST00000515996 FAT3Q8TDW7 4589 aa0.08□□□□□ -2.4
SCARNA21.1-201ENST00000515996 BAHCC1Q9P281 2608 aa0.08□□□□□ -2.4
SCARNA21.1-201ENST00000515996 GCN1Q92616 2671 aaKnown RBP0.08□□□□□ -2.4
SCARNA21.1-201ENST00000515996 TGP01266 2768 aa0.07□□□□□ -2.4
SCARNA21.1-201ENST00000515996 CYP2D7A0A087X1C5 515 aa0.07□□□□□ -2.4
SCARNA21.1-201ENST00000515996 B4DGG1 531 aa0.07□□□□□ -2.4
SCARNA21.1-201ENST00000515996 E5RJQ4 531 aa0.07□□□□□ -2.4
SCARNA21.1-201ENST00000515996 PAK4O96013 591 aaPredicted RBP0.07□□□□□ -2.4
SCARNA21.1-201ENST00000515996 F13A1P00488 732 aa0.07□□□□□ -2.4
SCARNA21.1-201ENST00000515996 USP17L7P0C7H9 530 aa0.07□□□□□ -2.4
SCARNA21.1-201ENST00000515996 PSG1P11464 419 aa0.07□□□□□ -2.4
SCARNA21.1-201ENST00000515996 SSFA2P28290 1259 aa0.07□□□□□ -2.4
SCARNA21.1-201ENST00000515996 MXRA7P84157 204 aa0.07□□□□□ -2.4
SCARNA21.1-201ENST00000515996 CD83Q01151 205 aa0.07□□□□□ -2.4
SCARNA21.1-201ENST00000515996 ZNF211Q13398 564 aaPredicted RBP0.07□□□□□ -2.4
SCARNA21.1-201ENST00000515996 TUSC3Q13454 348 aa0.07□□□□□ -2.4
SCARNA21.1-201ENST00000515996 TCIRG1Q13488 830 aa0.07□□□□□ -2.4
SCARNA21.1-201ENST00000515996 DAZAP2Q15038 168 aaPredicted RBP0.07□□□□□ -2.4
SCARNA21.1-201ENST00000515996 RBMS2Q15434 407 aaKnown RBP0.07□□□□□ -2.4
SCARNA21.1-201ENST00000515996 STILQ15468 1287 aa0.07□□□□□ -2.4
SCARNA21.1-201ENST00000515996 C14orf177Q52M58 125 aa0.07□□□□□ -2.4
SCARNA21.1-201ENST00000515996 ANKRD39Q53RE8 183 aa0.07□□□□□ -2.4
SCARNA21.1-201ENST00000515996 METTL24Q5JXM2 366 aa0.07□□□□□ -2.4
SCARNA21.1-201ENST00000515996 AXDND1Q5T1B0 1012 aaPredicted RBP0.07□□□□□ -2.4
SCARNA21.1-201ENST00000515996 DAB2IPQ5VWQ8 1189 aa0.07□□□□□ -2.4
SCARNA21.1-201ENST00000515996 SPINK14Q6IE38 97 aa0.07□□□□□ -2.4
SCARNA21.1-201ENST00000515996 ARMC6Q6NXE6 501 aa0.07□□□□□ -2.4
SCARNA21.1-201ENST00000515996 CCDC84Q86UT8 332 aaPredicted RBP0.07□□□□□ -2.4
SCARNA21.1-201ENST00000515996 ADCY4Q8NFM4 1077 aa0.07□□□□□ -2.4
SCARNA21.1-201ENST00000515996 GCDHQ92947 438 aaPredicted RBP0.07□□□□□ -2.4
SCARNA21.1-201ENST00000515996 FAM234AQ9H0X4 552 aa0.07□□□□□ -2.4
SCARNA21.1-201ENST00000515996 TNMDQ9H2S6 317 aa0.07□□□□□ -2.4
SCARNA21.1-201ENST00000515996 EPB41L1Q9H4G0 881 aa0.07□□□□□ -2.4
SCARNA21.1-201ENST00000515996 GPRC5CQ9NQ84 441 aa0.07□□□□□ -2.4
SCARNA21.1-201ENST00000515996 TBCCD1Q9NVR7 557 aa0.07□□□□□ -2.4
SCARNA21.1-201ENST00000515996 SERGEFQ9UGK8 458 aa0.07□□□□□ -2.4
SCARNA21.1-201ENST00000515996 PADI4Q9UM07 663 aa0.07□□□□□ -2.4
SCARNA21.1-201ENST00000515996 TIMELESSQ9UNS1 1208 aa0.07□□□□□ -2.4
SCARNA21.1-201ENST00000515996 TLR6Q9Y2C9 796 aa0.07□□□□□ -2.4
SCARNA21.1-201ENST00000515996 NTNG1Q9Y2I2 539 aa0.07□□□□□ -2.4
SCARNA21.1-201ENST00000515996 ZNF451Q9Y4E5 1061 aa0.07□□□□□ -2.4
SCARNA21.1-201ENST00000515996 FPGT-TNNI3KV9GXZ4 949 aa0.07□□□□□ -2.4
SCARNA21.1-201ENST00000515996 COL7A1Q02388 2944 aa0.07□□□□□ -2.4
SCARNA21.1-201ENST00000515996 CACNA1BQ00975 2339 aa0.06□□□□□ -2.4
SCARNA21.1-201ENST00000515996 TMEM129A0AVI4 362 aa0.06□□□□□ -2.4
SCARNA21.1-201ENST00000515996 FAM86C2PA6NEL3 165 aa0.06□□□□□ -2.4
SCARNA21.1-201ENST00000515996 A8MU10 97 aa0.06□□□□□ -2.4
SCARNA21.1-201ENST00000515996 KRIT1O00522 736 aa0.06□□□□□ -2.4
SCARNA21.1-201ENST00000515996 EXTL3O43909 919 aa0.06□□□□□ -2.4
SCARNA21.1-201ENST00000515996 ORC4O43929 436 aa0.06□□□□□ -2.4
SCARNA21.1-201ENST00000515996 PRB2P02812 416 aaPredicted RBP0.06□□□□□ -2.4
SCARNA21.1-201ENST00000515996 HNRNPA1P09651 372 aaKnown RBP eCLIP0.06□□□□□ -2.4
SCARNA21.1-201ENST00000515996 ELFN1P0C7U0 828 aa0.06□□□□□ -2.4
SCARNA21.1-201ENST00000515996 SPATA31D3P0C874 917 aa0.06□□□□□ -2.4
SCARNA21.1-201ENST00000515996 ZNF883P0CG24 379 aa0.06□□□□□ -2.4
SCARNA21.1-201ENST00000515996 MYF6P23409 242 aa0.06□□□□□ -2.4
SCARNA21.1-201ENST00000515996 SREBF1P36956 1147 aa0.06□□□□□ -2.4
SCARNA21.1-201ENST00000515996 MAPK10P53779 464 aa0.06□□□□□ -2.4
SCARNA21.1-201ENST00000515996 ERVK11-1P61568 191 aa0.06□□□□□ -2.4
SCARNA21.1-201ENST00000515996 AMPD2Q01433 879 aa0.06□□□□□ -2.4
SCARNA21.1-201ENST00000515996 NHLH2Q02577 135 aa0.06□□□□□ -2.4
SCARNA21.1-201ENST00000515996 KEAP1Q14145 624 aa0.06□□□□□ -2.4
SCARNA21.1-201ENST00000515996 SPIDRQ14159 915 aa0.06□□□□□ -2.4
SCARNA21.1-201ENST00000515996 ZNF672Q499Z4 452 aaPredicted RBP0.06□□□□□ -2.4
SCARNA21.1-201ENST00000515996 GAGE13Q4V321 117 aa0.06□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms