RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 DMAP1Q9NPF5 467 aaPredicted RBP6.13□□□□□ -1.43
USP38-203ENST00000511739 WARS2Q9UGM6 360 aaKnown RBP6.13□□□□□ -1.43
USP38-203ENST00000511739 UTYO14607 1347 aa6.13□□□□□ -1.43
USP38-203ENST00000511739 EIF3DO15371 548 aaKnown RBP eCLIP6.13□□□□□ -1.43
USP38-203ENST00000511739 RARBP10826 455 aa6.13□□□□□ -1.43
USP38-203ENST00000511739 CCT5P48643 541 aa6.13□□□□□ -1.43
USP38-203ENST00000511739 HSD17B4P51659 736 aa6.13□□□□□ -1.43
USP38-203ENST00000511739 RBM6P78332 1123 aaKnown RBP6.13□□□□□ -1.43
USP38-203ENST00000511739 RNF135Q8IUD6 432 aa6.13□□□□□ -1.43
USP38-203ENST00000511739 KRT78Q8N1N4 520 aa6.13□□□□□ -1.43
USP38-203ENST00000511739 TNIP3Q96KP6 325 aa6.13□□□□□ -1.43
USP38-203ENST00000511739 MTA3Q9BTC8 594 aa6.13□□□□□ -1.43
USP38-203ENST00000511739 MRPL4Q9BYD3 311 aaKnown RBP6.13□□□□□ -1.43
USP38-203ENST00000511739 FAM217BQ9NTX9 383 aaPredicted RBP6.13□□□□□ -1.43
USP38-203ENST00000511739 USP17L15C9J2P7 530 aa6.13□□□□□ -1.43
USP38-203ENST00000511739 USP17L13C9JLJ4 530 aa6.13□□□□□ -1.43
USP38-203ENST00000511739 USP17L11C9JVI0 530 aa6.13□□□□□ -1.43
USP38-203ENST00000511739 USP17L18D6R9N7 530 aa6.13□□□□□ -1.43
USP38-203ENST00000511739 USP17L22D6RA61 530 aa6.13□□□□□ -1.43
USP38-203ENST00000511739 USP17L17D6RBQ6 530 aa6.13□□□□□ -1.43
USP38-203ENST00000511739 USP17L19D6RCP7 530 aa6.13□□□□□ -1.43
USP38-203ENST00000511739 USP17L20D6RJB6 530 aa6.13□□□□□ -1.43
USP38-203ENST00000511739 IMPDH2P12268 514 aa6.13□□□□□ -1.43
USP38-203ENST00000511739 ADORA1P30542 326 aa6.13□□□□□ -1.43
USP38-203ENST00000511739 CHRNA3P32297 505 aa6.13□□□□□ -1.43
USP38-203ENST00000511739 STAT3P40763 770 aa6.13□□□□□ -1.43
USP38-203ENST00000511739 ALDH1A3P47895 512 aa6.13□□□□□ -1.43
USP38-203ENST00000511739 PPP3CCP48454 512 aa6.13□□□□□ -1.43
USP38-203ENST00000511739 HPCAP84074 193 aa6.13□□□□□ -1.43
USP38-203ENST00000511739 USP17L24Q0WX57 530 aa6.13□□□□□ -1.43
USP38-203ENST00000511739 HEATR6Q6AI08 1181 aaKnown RBP6.13□□□□□ -1.43
USP38-203ENST00000511739 CLEC4GQ6UXB4 293 aa6.13□□□□□ -1.43
USP38-203ENST00000511739 ASAP3Q8TDY4 903 aa6.13□□□□□ -1.43
USP38-203ENST00000511739 UCMAQ8WVF2 138 aa6.13□□□□□ -1.43
USP38-203ENST00000511739 PPP1R13BQ96KQ4 1090 aa6.13□□□□□ -1.43
USP38-203ENST00000511739 SEPT5Q99719 369 aaPredicted RBP6.13□□□□□ -1.43
USP38-203ENST00000511739 NDEL1Q9GZM8 345 aa6.13□□□□□ -1.43
USP38-203ENST00000511739 MUC3BQ9H195 1237 aa6.13□□□□□ -1.43
USP38-203ENST00000511739 MFSD1Q9H3U5 465 aa6.13□□□□□ -1.43
USP38-203ENST00000511739 CYP26B1Q9NR63 512 aa6.13□□□□□ -1.43
USP38-203ENST00000511739 DNAJC17Q9NVM6 304 aaKnown RBP6.13□□□□□ -1.43
USP38-203ENST00000511739 AXIN2Q9Y2T1 843 aa6.13□□□□□ -1.43
USP38-203ENST00000511739 KNDC1Q76NI1 1749 aa6.13□□□□□ -1.43
USP38-203ENST00000511739 LRRIQ3A6PVS8 624 aaPredicted RBP6.13□□□□□ -1.43
USP38-203ENST00000511739 COPEO14579 308 aa6.13□□□□□ -1.43
USP38-203ENST00000511739 DYNC1LI2O43237 492 aaPredicted RBP6.13□□□□□ -1.43
USP38-203ENST00000511739 KRT38O76015 456 aa6.13□□□□□ -1.43
USP38-203ENST00000511739 LUC7L3O95232 432 aaKnown RBP6.13□□□□□ -1.43
USP38-203ENST00000511739 ESRRAP11474 423 aaPredicted RBP6.13□□□□□ -1.43
USP38-203ENST00000511739 DARSP14868 501 aaKnown RBP6.13□□□□□ -1.43
USP38-203ENST00000511739 HUNKP57058 714 aa6.13□□□□□ -1.43
USP38-203ENST00000511739 RWDD2BP57060 319 aa6.13□□□□□ -1.43
USP38-203ENST00000511739 MAP3K10Q02779 954 aa6.13□□□□□ -1.43
USP38-203ENST00000511739 IER5Q5VY09 327 aa6.13□□□□□ -1.43
USP38-203ENST00000511739 ANKS6Q68DC2 871 aa6.13□□□□□ -1.43
USP38-203ENST00000511739 KRT39Q6A163 491 aa6.13□□□□□ -1.43
USP38-203ENST00000511739 SWSAP1Q6NVH7 229 aa6.13□□□□□ -1.43
USP38-203ENST00000511739 SPATS2Q86XZ4 545 aaKnown RBP6.13□□□□□ -1.43
USP38-203ENST00000511739 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.13□□□□□ -1.43
USP38-203ENST00000511739 HES6Q96HZ4 224 aa6.13□□□□□ -1.43
USP38-203ENST00000511739 RBM41Q96IZ5 413 aaKnown RBP6.13□□□□□ -1.43
USP38-203ENST00000511739 GPR101Q96P66 508 aaPredicted RBP6.13□□□□□ -1.43
USP38-203ENST00000511739 USP28Q96RU2 1077 aa6.13□□□□□ -1.43
USP38-203ENST00000511739 CCDC90BQ9GZT6 254 aa6.13□□□□□ -1.43
USP38-203ENST00000511739 BSDC1Q9NW68 430 aaPredicted RBP6.13□□□□□ -1.43
USP38-203ENST00000511739 AFF2P51816 1311 aa6.13□□□□□ -1.43
USP38-203ENST00000511739 DYRK3O43781 588 aa6.13□□□□□ -1.43
USP38-203ENST00000511739 SRGAP2O75044 1071 aa6.13□□□□□ -1.43
USP38-203ENST00000511739 CD2BP2O95400 341 aaKnown RBP6.13□□□□□ -1.43
USP38-203ENST00000511739 CALB1P05937 261 aa6.13□□□□□ -1.43
USP38-203ENST00000511739 HMBSP08397 361 aa6.13□□□□□ -1.43
USP38-203ENST00000511739 NCALDP61601 193 aa6.13□□□□□ -1.43
USP38-203ENST00000511739 TMPRSS15P98073 1019 aa6.13□□□□□ -1.43
USP38-203ENST00000511739 AP3B2Q13367 1082 aa6.13□□□□□ -1.43
USP38-203ENST00000511739 KYAT1Q16773 422 aa6.13□□□□□ -1.43
USP38-203ENST00000511739 ERAP2Q6P179 960 aa6.13□□□□□ -1.43
USP38-203ENST00000511739 KCNV1Q6PIU1 500 aa6.13□□□□□ -1.43
USP38-203ENST00000511739 TSEN34Q9BSV6 310 aaKnown RBP6.13□□□□□ -1.43
USP38-203ENST00000511739 FOXP1Q9H334 677 aaPredicted RBP6.13□□□□□ -1.43
USP38-203ENST00000511739 FANCLQ9NW38 375 aa6.13□□□□□ -1.43
USP38-203ENST00000511739 PSD3Q9NYI0 1048 aa6.13□□□□□ -1.43
USP38-203ENST00000511739 BFARQ9NZS9 450 aa6.13□□□□□ -1.43
USP38-203ENST00000511739 ARHGAP26Q9UNA1 814 aa6.13□□□□□ -1.43
USP38-203ENST00000511739 MYO5BQ9ULV0 1848 aa6.13□□□□□ -1.43
USP38-203ENST00000511739 SHPRHQ149N8 1683 aa6.12□□□□□ -1.43
USP38-203ENST00000511739 SFI1A8K8P3 1242 aa6.12□□□□□ -1.43
USP38-203ENST00000511739 TXNP10599 105 aaKnown RBP6.12□□□□□ -1.43
USP38-203ENST00000511739 HMOX2P30519 316 aa6.12□□□□□ -1.43
USP38-203ENST00000511739 SLC8A1P32418 973 aa6.12□□□□□ -1.43
USP38-203ENST00000511739 ARL4CP56559 192 aa6.12□□□□□ -1.43
USP38-203ENST00000511739 FSCBQ5H9T9 825 aa6.12□□□□□ -1.43
USP38-203ENST00000511739 TBC1D9BQ66K14 1250 aa6.12□□□□□ -1.43
USP38-203ENST00000511739 TMEM270Q6UE05 265 aa6.12□□□□□ -1.43
USP38-203ENST00000511739 GLB1LQ6UWU2 654 aa6.12□□□□□ -1.43
USP38-203ENST00000511739 C16orf62Q7Z3J2 963 aa6.12□□□□□ -1.43
USP38-203ENST00000511739 TRIML2Q8N7C3 387 aa6.12□□□□□ -1.43
USP38-203ENST00000511739 FAM213AQ9BRX8 229 aa6.12□□□□□ -1.43
USP38-203ENST00000511739 PUS3Q9BZE2 481 aaKnown RBP6.12□□□□□ -1.43
USP38-203ENST00000511739 LCMT1Q9UIC8 334 aa6.12□□□□□ -1.43
USP38-203ENST00000511739 SLC25A13Q9UJS0 675 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms