RNA–Protein interactions for RNA: ENST00000510558.6

SNF8-209, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 1,051 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-209ENST00000510558 PPP4R3CPQ6ZMV5 832 aa25.43■■□□□ 1.66
SNF8-209ENST00000510558 DDX53Q86TM3 631 aaKnown RBP25.43■■□□□ 1.66
SNF8-209ENST00000510558 BSNDQ8WZ55 320 aa25.43■■□□□ 1.66
SNF8-209ENST00000510558 FAM193BQ96PV7 902 aaPredicted RBP25.43■■□□□ 1.66
SNF8-209ENST00000510558 POP1Q99575 1024 aaKnown RBP25.43■■□□□ 1.66
SNF8-209ENST00000510558 ZBP1Q9H171 429 aa25.43■■□□□ 1.66
SNF8-209ENST00000510558 BHMT2Q9H2M3 363 aa25.43■■□□□ 1.66
SNF8-209ENST00000510558 RNF39Q9H2S5 420 aa25.43■■□□□ 1.66
SNF8-209ENST00000510558 DDX19AQ9NUU7 478 aaKnown RBP25.43■■□□□ 1.66
SNF8-209ENST00000510558 PRMT7Q9NVM4 692 aaPredicted RBP25.43■■□□□ 1.66
SNF8-209ENST00000510558 PI4K2BG5E9Z4 385 aa25.42■■□□□ 1.66
SNF8-209ENST00000510558 INPPL1O15357 1258 aa25.42■■□□□ 1.66
SNF8-209ENST00000510558 CA8P35219 290 aa25.42■■□□□ 1.66
SNF8-209ENST00000510558 MLH1P40692 756 aa25.42■■□□□ 1.66
SNF8-209ENST00000510558 IL17AQ16552 155 aa25.42■■□□□ 1.66
SNF8-209ENST00000510558 LLGL2Q6P1M3 1020 aa25.42■■□□□ 1.66
SNF8-209ENST00000510558 SLC27A1Q6PCB7 646 aa25.42■■□□□ 1.66
SNF8-209ENST00000510558 CDR2LQ86X02 465 aaPredicted RBP25.42■■□□□ 1.66
SNF8-209ENST00000510558 PRIMPOLQ96LW4 560 aa25.42■■□□□ 1.66
SNF8-209ENST00000510558 GAD1Q99259 594 aa25.42■■□□□ 1.66
SNF8-209ENST00000510558 TMEM175Q9BSA9 504 aa25.42■■□□□ 1.66
SNF8-209ENST00000510558 APOL6Q9BWW8 343 aa25.42■■□□□ 1.66
SNF8-209ENST00000510558 NXF3Q9H4D5 531 aaKnown RBP25.42■■□□□ 1.66
SNF8-209ENST00000510558 USP15Q9Y4E8 981 aaPredicted RBP25.42■■□□□ 1.66
SNF8-209ENST00000510558 A0A1B0GUA9 196 aa25.41■■□□□ 1.66
SNF8-209ENST00000510558 ARL5CA6NH57 179 aa25.41■■□□□ 1.66
SNF8-209ENST00000510558 PP2D1A8MPX8 630 aa25.41■■□□□ 1.66
SNF8-209ENST00000510558 NPTXRO95502 500 aa25.41■■□□□ 1.66
SNF8-209ENST00000510558 CXCL14O95715 111 aa25.41■■□□□ 1.66
SNF8-209ENST00000510558 NAMPTP43490 491 aa25.41■■□□□ 1.66
SNF8-209ENST00000510558 FAM187BQ17R55 369 aa25.41■■□□□ 1.66
SNF8-209ENST00000510558 DTHD1Q6ZMT9 781 aa25.41■■□□□ 1.66
SNF8-209ENST00000510558 HACE1Q8IYU2 909 aa25.41■■□□□ 1.66
SNF8-209ENST00000510558 C2orf40Q9H1Z8 148 aa25.41■■□□□ 1.66
SNF8-209ENST00000510558 FZD8Q9H461 694 aa25.41■■□□□ 1.66
SNF8-209ENST00000510558 GIT1Q9Y2X7 761 aa25.41■■□□□ 1.66
SNF8-209ENST00000510558 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.41■■□□□ 1.66
SNF8-209ENST00000510558 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP25.4■■□□□ 1.66
SNF8-209ENST00000510558 ALDH2P05091 517 aa25.4■■□□□ 1.66
SNF8-209ENST00000510558 CTSAP10619 480 aa25.4■■□□□ 1.66
SNF8-209ENST00000510558 PPP2R5AQ15172 486 aa25.4■■□□□ 1.66
SNF8-209ENST00000510558 KRT79Q5XKE5 535 aa25.4■■□□□ 1.66
SNF8-209ENST00000510558 ANKRD54Q6NXT1 300 aa25.4■■□□□ 1.66
SNF8-209ENST00000510558 DEPTORQ8TB45 409 aa25.4■■□□□ 1.66
SNF8-209ENST00000510558 AUTS2Q8WXX7 1259 aa25.4■■□□□ 1.66
SNF8-209ENST00000510558 VN1R3Q9BXE9 311 aa25.4■■□□□ 1.66
SNF8-209ENST00000510558 FAN1Q9Y2M0 1017 aa25.4■■□□□ 1.66
SNF8-209ENST00000510558 C5orf42Q9H799 3197 aa25.4■■□□□ 1.66
SNF8-209ENST00000510558 NRP1O14786 923 aa25.39■■□□□ 1.66
SNF8-209ENST00000510558 CLASP2O75122 1294 aaKnown RBP25.39■■□□□ 1.66
SNF8-209ENST00000510558 CDC25AP30304 524 aa25.39■■□□□ 1.66
SNF8-209ENST00000510558 SCNN1GP51170 649 aa25.39■■□□□ 1.66
SNF8-209ENST00000510558 ATP2C1P98194 919 aaPredicted RBP25.39■■□□□ 1.66
SNF8-209ENST00000510558 ZFP42Q96MM3 310 aa25.39■■□□□ 1.66
SNF8-209ENST00000510558 POLD4Q9HCU8 107 aa25.39■■□□□ 1.66
SNF8-209ENST00000510558 MIOSQ9NXC5 875 aa25.39■■□□□ 1.66
SNF8-209ENST00000510558 HCFC2Q9Y5Z7 792 aa25.39■■□□□ 1.66
SNF8-209ENST00000510558 IRAK3Q9Y616 596 aa25.39■■□□□ 1.66
SNF8-209ENST00000510558 PRKCBP05771 671 aa25.38■■□□□ 1.65
SNF8-209ENST00000510558 AKAP5P24588 427 aa25.38■■□□□ 1.65
SNF8-209ENST00000510558 MAPK6Q16659 721 aa25.38■■□□□ 1.65
SNF8-209ENST00000510558 SYCE2Q6PIF2 218 aa25.38■■□□□ 1.65
SNF8-209ENST00000510558 COLGALT2Q8IYK4 626 aa25.38■■□□□ 1.65
SNF8-209ENST00000510558 KIFAP3Q92845 792 aa25.38■■□□□ 1.65
SNF8-209ENST00000510558 CASP10Q92851 521 aa25.38■■□□□ 1.65
SNF8-209ENST00000510558 IFT74Q96LB3 600 aa25.38■■□□□ 1.65
SNF8-209ENST00000510558 MMTAG2Q9BU76 263 aaKnown RBP25.38■■□□□ 1.65
SNF8-209ENST00000510558 CCDC113Q9H0I3 377 aa25.38■■□□□ 1.65
SNF8-209ENST00000510558 DNM3Q9UQ16 869 aa25.38■■□□□ 1.65
SNF8-209ENST00000510558 TTLL13PA6NNM8 815 aa25.37■■□□□ 1.65
SNF8-209ENST00000510558 E9PMD0 336 aa25.37■■□□□ 1.65
SNF8-209ENST00000510558 COL9A1P20849 921 aa25.37■■□□□ 1.65
SNF8-209ENST00000510558 DSC1Q08554 894 aa25.37■■□□□ 1.65
SNF8-209ENST00000510558 PRPF4BQ13523 1007 aaKnown RBP25.37■■□□□ 1.65
SNF8-209ENST00000510558 GIT2Q14161 759 aa25.37■■□□□ 1.65
SNF8-209ENST00000510558 TMEM31Q5JXX7 168 aa25.37■■□□□ 1.65
SNF8-209ENST00000510558 LARP1BQ659C4 914 aaKnown RBP25.37■■□□□ 1.65
SNF8-209ENST00000510558 TMEM87AQ8NBN3 555 aa25.37■■□□□ 1.65
SNF8-209ENST00000510558 SUSD6Q92537 303 aa25.37■■□□□ 1.65
SNF8-209ENST00000510558 KIFC3Q9BVG8 833 aa25.37■■□□□ 1.65
SNF8-209ENST00000510558 S1PR5Q9H228 398 aa25.37■■□□□ 1.65
SNF8-209ENST00000510558 PDZD7Q9H5P4 517 aa25.37■■□□□ 1.65
SNF8-209ENST00000510558 STK39Q9UEW8 545 aa25.37■■□□□ 1.65
SNF8-209ENST00000510558 PRG3Q9Y2Y8 225 aaPredicted RBP25.37■■□□□ 1.65
SNF8-209ENST00000510558 ZMYM2Q9UBW7 1377 aa25.36■■□□□ 1.65
SNF8-209ENST00000510558 N4BP3O15049 544 aa25.36■■□□□ 1.65
SNF8-209ENST00000510558 ALADP13716 330 aa25.36■■□□□ 1.65
SNF8-209ENST00000510558 HOXB8P17481 243 aaPredicted RBP25.36■■□□□ 1.65
SNF8-209ENST00000510558 LIG1P18858 919 aa25.36■■□□□ 1.65
SNF8-209ENST00000510558 OR1G1P47890 313 aa25.36■■□□□ 1.65
SNF8-209ENST00000510558 TMEM132AQ24JP5 1023 aa25.36■■□□□ 1.65
SNF8-209ENST00000510558 LRFN3Q9BTN0 628 aa25.36■■□□□ 1.65
SNF8-209ENST00000510558 APOL5Q9BWW9 433 aa25.36■■□□□ 1.65
SNF8-209ENST00000510558 C11orf16Q9NQ32 467 aa25.36■■□□□ 1.65
SNF8-209ENST00000510558 MARCH5Q9NX47 278 aa25.36■■□□□ 1.65
SNF8-209ENST00000510558 PARP2Q9UGN5 583 aa25.36■■□□□ 1.65
SNF8-209ENST00000510558 FAM86C2PA6NEL3 165 aa25.35■■□□□ 1.65
SNF8-209ENST00000510558 ACKR2O00590 384 aa25.35■■□□□ 1.65
SNF8-209ENST00000510558 DCXO43602 365 aa25.35■■□□□ 1.65
SNF8-209ENST00000510558 PTPN14Q15678 1187 aa25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms