RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 CYP1A1P04798 512 aaPredicted RBP4.5□□□□□ -1.69
LSM6-205ENST00000507449 U2AF1L5P0DN76 240 aaPredicted RBP4.5□□□□□ -1.69
LSM6-205ENST00000507449 MYBP10242 640 aa4.5□□□□□ -1.69
LSM6-205ENST00000507449 HSPA6P17066 643 aa4.5□□□□□ -1.69
LSM6-205ENST00000507449 SLC16A1P53985 500 aa4.5□□□□□ -1.69
LSM6-205ENST00000507449 SLURP1P55000 103 aa4.5□□□□□ -1.69
LSM6-205ENST00000507449 U2AF1Q01081 240 aaKnown RBP eCLIP4.5□□□□□ -1.69
LSM6-205ENST00000507449 MEF2AQ02078 507 aaPredicted RBP4.5□□□□□ -1.69
LSM6-205ENST00000507449 DSC2Q02487 901 aa4.5□□□□□ -1.69
LSM6-205ENST00000507449 HGFACQ04756 655 aa4.5□□□□□ -1.69
LSM6-205ENST00000507449 GBX1Q14549 363 aa4.5□□□□□ -1.69
LSM6-205ENST00000507449 USP10Q14694 798 aaKnown RBP4.5□□□□□ -1.69
LSM6-205ENST00000507449 MAN2A1Q16706 1144 aa4.5□□□□□ -1.69
LSM6-205ENST00000507449 DGKHQ86XP1 1220 aa4.5□□□□□ -1.69
LSM6-205ENST00000507449 C1QL4Q86Z23 238 aa4.5□□□□□ -1.69
LSM6-205ENST00000507449 GPR156Q8NFN8 814 aa4.5□□□□□ -1.69
LSM6-205ENST00000507449 PPP1R35Q8TAP8 253 aa4.5□□□□□ -1.69
LSM6-205ENST00000507449 SNX33Q8WV41 574 aa4.5□□□□□ -1.69
LSM6-205ENST00000507449 KAT5Q92993 513 aa4.5□□□□□ -1.69
LSM6-205ENST00000507449 GFM2Q969S9 779 aaKnown RBP4.5□□□□□ -1.69
LSM6-205ENST00000507449 MVB12AQ96EY5 273 aa4.5□□□□□ -1.69
LSM6-205ENST00000507449 ACO2Q99798 780 aaKnown RBP4.5□□□□□ -1.69
LSM6-205ENST00000507449 ING3Q9NXR8 418 aa4.5□□□□□ -1.69
LSM6-205ENST00000507449 PCDHB1Q9Y5F3 818 aa4.5□□□□□ -1.69
LSM6-205ENST00000507449 RPTORQ8N122 1335 aa4.49□□□□□ -1.69
LSM6-205ENST00000507449 GOLGA6CA6NDK9 693 aa4.49□□□□□ -1.69
LSM6-205ENST00000507449 GOLGA6BA6NDN3 693 aa4.49□□□□□ -1.69
LSM6-205ENST00000507449 C9orf118A6NHY6 69 aa4.49□□□□□ -1.69
LSM6-205ENST00000507449 MATN2O00339 956 aa4.49□□□□□ -1.69
LSM6-205ENST00000507449 ERC2O15083 957 aa4.49□□□□□ -1.69
LSM6-205ENST00000507449 ADCY6O43306 1168 aa4.49□□□□□ -1.69
LSM6-205ENST00000507449 AKR1B10O60218 316 aa4.49□□□□□ -1.69
LSM6-205ENST00000507449 PRAMEF4O60810 478 aa4.49□□□□□ -1.69
LSM6-205ENST00000507449 GOLGA6DP0CG33 693 aa4.49□□□□□ -1.69
LSM6-205ENST00000507449 ADSLP30566 484 aaPredicted RBP4.49□□□□□ -1.69
LSM6-205ENST00000507449 NOMO1Q15155 1222 aa4.49□□□□□ -1.69
LSM6-205ENST00000507449 C19orf54Q5BKX5 351 aa4.49□□□□□ -1.69
LSM6-205ENST00000507449 OVCH2Q7RTZ1 564 aa4.49□□□□□ -1.69
LSM6-205ENST00000507449 CCDC146Q8IYE0 955 aa4.49□□□□□ -1.69
LSM6-205ENST00000507449 GRAMD1CQ8IYS0 662 aa4.49□□□□□ -1.69
LSM6-205ENST00000507449 MARCH10Q8NA82 808 aaPredicted RBP4.49□□□□□ -1.69
LSM6-205ENST00000507449 PLA2G15Q8NCC3 412 aa4.49□□□□□ -1.69
LSM6-205ENST00000507449 ZBTB34Q8NCN2 500 aa4.49□□□□□ -1.69
LSM6-205ENST00000507449 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.49□□□□□ -1.69
LSM6-205ENST00000507449 CFHR4Q92496 578 aa4.49□□□□□ -1.69
LSM6-205ENST00000507449 RAB24Q969Q5 203 aa4.49□□□□□ -1.69
LSM6-205ENST00000507449 PAWRQ96IZ0 340 aaKnown RBP4.49□□□□□ -1.69
LSM6-205ENST00000507449 UIMC1Q96RL1 719 aa4.49□□□□□ -1.69
LSM6-205ENST00000507449 DMRTA2Q96SC8 542 aa4.49□□□□□ -1.69
LSM6-205ENST00000507449 OR10A2Q9H208 303 aa4.49□□□□□ -1.69
LSM6-205ENST00000507449 BARX1Q9HBU1 254 aaPredicted RBP4.49□□□□□ -1.69
LSM6-205ENST00000507449 TLR9Q9NR96 1032 aa4.49□□□□□ -1.69
LSM6-205ENST00000507449 GOLGA6AQ9NYA3 693 aa4.49□□□□□ -1.69
LSM6-205ENST00000507449 PCDHA13Q9Y5I0 950 aa4.49□□□□□ -1.69
LSM6-205ENST00000507449 RBM8AQ9Y5S9 174 aaKnown RBP4.49□□□□□ -1.69
LSM6-205ENST00000507449 ALDH1A2O94788 518 aa4.48□□□□□ -1.69
LSM6-205ENST00000507449 TOX4O94842 621 aa4.48□□□□□ -1.69
LSM6-205ENST00000507449 MAP4K4O95819 1239 aaPredicted RBP4.48□□□□□ -1.69
LSM6-205ENST00000507449 ALDH2P05091 517 aa4.48□□□□□ -1.69
LSM6-205ENST00000507449 SREBF1P36956 1147 aa4.48□□□□□ -1.69
LSM6-205ENST00000507449 KIR2DL3P43628 341 aa4.48□□□□□ -1.69
LSM6-205ENST00000507449 MEOX1P50221 254 aa4.48□□□□□ -1.69
LSM6-205ENST00000507449 ADCY7P51828 1080 aa4.48□□□□□ -1.69
LSM6-205ENST00000507449 USP14P54578 494 aa4.48□□□□□ -1.69
LSM6-205ENST00000507449 SESN2P58004 480 aaPredicted RBP4.48□□□□□ -1.69
LSM6-205ENST00000507449 ATP2C1P98194 919 aaPredicted RBP4.48□□□□□ -1.69
LSM6-205ENST00000507449 SAFB2Q14151 953 aaKnown RBP eCLIP4.48□□□□□ -1.69
LSM6-205ENST00000507449 RNF151Q2KHN1 245 aa4.48□□□□□ -1.69
LSM6-205ENST00000507449 PGS1Q32NB8 556 aa4.48□□□□□ -1.69
LSM6-205ENST00000507449 MAP9Q49MG5 647 aa4.48□□□□□ -1.69
LSM6-205ENST00000507449 ARHGAP29Q52LW3 1261 aa4.48□□□□□ -1.69
LSM6-205ENST00000507449 OR14K1Q8NGZ2 314 aa4.48□□□□□ -1.69
LSM6-205ENST00000507449 LCORQ96JN0 433 aaPredicted RBP4.48□□□□□ -1.69
LSM6-205ENST00000507449 MAP3K14Q99558 947 aa4.48□□□□□ -1.69
LSM6-205ENST00000507449 LRFN3Q9BTN0 628 aa4.48□□□□□ -1.69
LSM6-205ENST00000507449 TMPRSS5Q9H3S3 457 aa4.48□□□□□ -1.69
LSM6-205ENST00000507449 ARNT2Q9HBZ2 717 aa4.48□□□□□ -1.69
LSM6-205ENST00000507449 TRPS1Q9UHF7 1281 aa4.48□□□□□ -1.69
LSM6-205ENST00000507449 SAP30BPQ9UHR5 308 aaKnown RBP4.48□□□□□ -1.69
LSM6-205ENST00000507449 FAM184BQ9ULE4 1060 aa4.48□□□□□ -1.69
LSM6-205ENST00000507449 ZDHHC9Q9Y397 364 aa4.48□□□□□ -1.69
LSM6-205ENST00000507449 FAM171A2A8MVW0 826 aa4.47□□□□□ -1.69
LSM6-205ENST00000507449 NUAK1O60285 661 aa4.47□□□□□ -1.69
LSM6-205ENST00000507449 NOBOXO60393 691 aa4.47□□□□□ -1.69
LSM6-205ENST00000507449 B4GALT3O60512 393 aa4.47□□□□□ -1.69
LSM6-205ENST00000507449 CTNND1O60716 968 aaKnown RBP4.47□□□□□ -1.69
LSM6-205ENST00000507449 AMY1AP04745 511 aa4.47□□□□□ -1.69
LSM6-205ENST00000507449 TARDBPQ13148 414 aaKnown RBP eCLIP4.47□□□□□ -1.69
LSM6-205ENST00000507449 NFYCQ13952 458 aa4.47□□□□□ -1.69
LSM6-205ENST00000507449 ERICH6BQ5W0A0 696 aa4.47□□□□□ -1.69
LSM6-205ENST00000507449 USP30Q70CQ3 517 aa4.47□□□□□ -1.69
LSM6-205ENST00000507449 RALYLQ86SE5 291 aaKnown RBP4.47□□□□□ -1.69
LSM6-205ENST00000507449 KBTBD2Q8IY47 623 aa4.47□□□□□ -1.69
LSM6-205ENST00000507449 ZGPATQ8N5A5 531 aaKnown RBP4.47□□□□□ -1.69
LSM6-205ENST00000507449 REPS2Q8NFH8 660 aa4.47□□□□□ -1.69
LSM6-205ENST00000507449 NSUN6Q8TEA1 469 aaKnown RBP4.47□□□□□ -1.69
LSM6-205ENST00000507449 ZNF480Q8WV37 535 aa4.47□□□□□ -1.69
LSM6-205ENST00000507449 GCDHQ92947 438 aaPredicted RBP4.47□□□□□ -1.69
LSM6-205ENST00000507449 HDAC10Q969S8 669 aa4.47□□□□□ -1.69
LSM6-205ENST00000507449 SLC7A6OSQ96CW6 309 aaPredicted RBP4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms