RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 ST18O60284 1047 aa15.99■□□□□ 0.15
HMGCS1-203ENST00000507004 USO1O60763 962 aaKnown RBP15.99■□□□□ 0.15
HMGCS1-203ENST00000507004 C1RP00736 705 aa15.99■□□□□ 0.15
HMGCS1-203ENST00000507004 SPATA31C1P0DKV0 1188 aa15.99■□□□□ 0.15
HMGCS1-203ENST00000507004 GLRA2P23416 452 aa15.99■□□□□ 0.15
HMGCS1-203ENST00000507004 SLC11A1P49279 550 aa15.99■□□□□ 0.15
HMGCS1-203ENST00000507004 FOSBP53539 338 aa15.99■□□□□ 0.15
HMGCS1-203ENST00000507004 RABEP1Q15276 862 aa15.99■□□□□ 0.15
HMGCS1-203ENST00000507004 SLC27A1Q6PCB7 646 aa15.99■□□□□ 0.15
HMGCS1-203ENST00000507004 GPR65Q8IYL9 337 aa15.99■□□□□ 0.15
HMGCS1-203ENST00000507004 ASAP3Q8TDY4 903 aa15.99■□□□□ 0.15
HMGCS1-203ENST00000507004 PIGOQ8TEQ8 1089 aa15.99■□□□□ 0.15
HMGCS1-203ENST00000507004 GBP3Q9H0R5 595 aa15.99■□□□□ 0.15
HMGCS1-203ENST00000507004 POLR3FQ9H1D9 316 aaPredicted RBP15.99■□□□□ 0.15
HMGCS1-203ENST00000507004 UPF2Q9HAU5 1272 aaKnown RBP15.99■□□□□ 0.15
HMGCS1-203ENST00000507004 MRPL17Q9NRX2 175 aaKnown RBP15.99■□□□□ 0.15
HMGCS1-203ENST00000507004 MUTYHQ9UIF7 546 aa15.99■□□□□ 0.15
HMGCS1-203ENST00000507004 PHLPP2Q6ZVD8 1323 aa15.98■□□□□ 0.15
HMGCS1-203ENST00000507004 A0A1B0GUA9 196 aa15.98■□□□□ 0.15
HMGCS1-203ENST00000507004 ARHGEF35A5YM69 484 aa15.98■□□□□ 0.15
HMGCS1-203ENST00000507004 MEIS3P2A8K0S8 358 aa15.98■□□□□ 0.15
HMGCS1-203ENST00000507004 DTNBO60941 627 aa15.98■□□□□ 0.15
HMGCS1-203ENST00000507004 ARF4P18085 180 aaPredicted RBP15.98■□□□□ 0.15
HMGCS1-203ENST00000507004 FXR2P51116 673 aaKnown RBP eCLIP15.98■□□□□ 0.154e-12■■■□□ 19
HMGCS1-203ENST00000507004 GUCY1B3Q02153 619 aa15.98■□□□□ 0.15
HMGCS1-203ENST00000507004 PDIA5Q14554 519 aa15.98■□□□□ 0.15
HMGCS1-203ENST00000507004 FAM187BQ17R55 369 aa15.98■□□□□ 0.15
HMGCS1-203ENST00000507004 LONRF3Q496Y0 759 aa15.98■□□□□ 0.15
HMGCS1-203ENST00000507004 ATAT1Q5SQI0 421 aa15.98■□□□□ 0.15
HMGCS1-203ENST00000507004 LLGL2Q6P1M3 1020 aa15.98■□□□□ 0.15
HMGCS1-203ENST00000507004 APBB1IPQ7Z5R6 666 aaPredicted RBP15.98■□□□□ 0.15
HMGCS1-203ENST00000507004 SMG8Q8ND04 991 aaKnown RBP15.98■□□□□ 0.15
HMGCS1-203ENST00000507004 RPGRIP1Q96KN7 1286 aa15.98■□□□□ 0.15
HMGCS1-203ENST00000507004 COLEC11Q9BWP8 271 aa15.98■□□□□ 0.15
HMGCS1-203ENST00000507004 LRRIQ4A6NIV6 560 aa15.97■□□□□ 0.15
HMGCS1-203ENST00000507004 NRP1O14786 923 aa15.97■□□□□ 0.15
HMGCS1-203ENST00000507004 DDHD2O94830 711 aa15.97■□□□□ 0.15
HMGCS1-203ENST00000507004 SOD2P04179 222 aa15.97■□□□□ 0.15
HMGCS1-203ENST00000507004 URODP06132 367 aa15.97■□□□□ 0.15
HMGCS1-203ENST00000507004 CYP11B2P19099 503 aa15.97■□□□□ 0.15
HMGCS1-203ENST00000507004 U2AF2P26368 475 aaKnown RBP eCLIP15.97■□□□□ 0.151e-12■■□□□ 12.4
HMGCS1-203ENST00000507004 NAMPTP43490 491 aa15.97■□□□□ 0.15
HMGCS1-203ENST00000507004 PTPN14Q15678 1187 aa15.97■□□□□ 0.15
HMGCS1-203ENST00000507004 ZNF174Q15697 407 aa15.97■□□□□ 0.15
HMGCS1-203ENST00000507004 MAPK6Q16659 721 aa15.97■□□□□ 0.15
HMGCS1-203ENST00000507004 AMHR2Q16671 573 aa15.97■□□□□ 0.15
HMGCS1-203ENST00000507004 CDCA2Q69YH5 1023 aaPredicted RBP15.97■□□□□ 0.15
HMGCS1-203ENST00000507004 CYP26C1Q6V0L0 522 aa15.97■□□□□ 0.15
HMGCS1-203ENST00000507004 TMEM173Q86WV6 379 aaPredicted RBP15.97■□□□□ 0.15
HMGCS1-203ENST00000507004 ZNF280BQ86YH2 543 aa15.97■□□□□ 0.15
HMGCS1-203ENST00000507004 KCTD17Q8N5Z5 321 aa15.97■□□□□ 0.15
HMGCS1-203ENST00000507004 PRRX2Q99811 253 aa15.97■□□□□ 0.15
HMGCS1-203ENST00000507004 ADPGKQ9BRR6 497 aa15.97■□□□□ 0.15
HMGCS1-203ENST00000507004 SFXN1Q9H9B4 322 aa15.97■□□□□ 0.15
HMGCS1-203ENST00000507004 DNAJB4Q9UDY4 337 aa15.97■□□□□ 0.15
HMGCS1-203ENST00000507004 USTQ9Y2C2 406 aa15.97■□□□□ 0.15
HMGCS1-203ENST00000507004 ARL5CA6NH57 179 aa15.96■□□□□ 0.15
HMGCS1-203ENST00000507004 WNT7AO00755 349 aa15.96■□□□□ 0.15
HMGCS1-203ENST00000507004 N4BP3O15049 544 aa15.96■□□□□ 0.15
HMGCS1-203ENST00000507004 MED24O75448 989 aa15.96■□□□□ 0.15
HMGCS1-203ENST00000507004 POMCP01189 267 aa15.96■□□□□ 0.15
HMGCS1-203ENST00000507004 ADH1AP07327 375 aa15.96■□□□□ 0.15
HMGCS1-203ENST00000507004 MCM2P49736 904 aa15.96■□□□□ 0.15
HMGCS1-203ENST00000507004 EFNA5P52803 228 aa15.96■□□□□ 0.15
HMGCS1-203ENST00000507004 ZXDAP98168 799 aa15.96■□□□□ 0.15
HMGCS1-203ENST00000507004 RBM10P98175 930 aaKnown RBP15.96■□□□□ 0.15
HMGCS1-203ENST00000507004 CREMQ03060 361 aa15.96■□□□□ 0.15
HMGCS1-203ENST00000507004 DSC1Q08554 894 aa15.96■□□□□ 0.15
HMGCS1-203ENST00000507004 GRIK3Q13003 919 aa15.96■□□□□ 0.15
HMGCS1-203ENST00000507004 KIAA1841Q6NSI8 718 aa15.96■□□□□ 0.15
HMGCS1-203ENST00000507004 PADI6Q6TGC4 694 aa15.96■□□□□ 0.15
HMGCS1-203ENST00000507004 TRIM67Q6ZTA4 783 aa15.96■□□□□ 0.15
HMGCS1-203ENST00000507004 CABP7Q86V35 215 aa15.96■□□□□ 0.15
HMGCS1-203ENST00000507004 COLGALT2Q8IYK4 626 aa15.96■□□□□ 0.15
HMGCS1-203ENST00000507004 PLCD3Q8N3E9 789 aa15.96■□□□□ 0.15
HMGCS1-203ENST00000507004 SLC22A17Q8WUG5 538 aa15.96■□□□□ 0.15
HMGCS1-203ENST00000507004 KIFAP3Q92845 792 aa15.96■□□□□ 0.15
HMGCS1-203ENST00000507004 IFT74Q96LB3 600 aa15.96■□□□□ 0.15
HMGCS1-203ENST00000507004 RPS6KC1Q96S38 1066 aa15.96■□□□□ 0.15
HMGCS1-203ENST00000507004 GAD1Q99259 594 aa15.96■□□□□ 0.15
HMGCS1-203ENST00000507004 HERC2P3Q9BVR0 1158 aa15.96■□□□□ 0.15
HMGCS1-203ENST00000507004 EIF2AQ9BY44 585 aaKnown RBP15.96■□□□□ 0.15
HMGCS1-203ENST00000507004 FZD8Q9H461 694 aa15.96■□□□□ 0.15
HMGCS1-203ENST00000507004 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.96■□□□□ 0.15
HMGCS1-203ENST00000507004 LRWD1Q9UFC0 647 aa15.96■□□□□ 0.15
HMGCS1-203ENST00000507004 KCNG1Q9UIX4 513 aa15.96■□□□□ 0.15
HMGCS1-203ENST00000507004 SPDYE4A6NLX3 237 aa15.95■□□□□ 0.14
HMGCS1-203ENST00000507004 KLRC2P26717 231 aa15.95■□□□□ 0.14
HMGCS1-203ENST00000507004 CCT6AP40227 531 aaKnown RBP15.95■□□□□ 0.14
HMGCS1-203ENST00000507004 MLH1P40692 756 aa15.95■□□□□ 0.14
HMGCS1-203ENST00000507004 PRPHP41219 470 aa15.95■□□□□ 0.14
HMGCS1-203ENST00000507004 OR1G1P47890 313 aa15.95■□□□□ 0.14
HMGCS1-203ENST00000507004 SIGLEC14Q08ET2 396 aa15.95■□□□□ 0.14
HMGCS1-203ENST00000507004 C8orf34Q49A92 452 aa15.95■□□□□ 0.14
HMGCS1-203ENST00000507004 DEPTORQ8TB45 409 aa15.95■□□□□ 0.14
HMGCS1-203ENST00000507004 CPB2Q96IY4 423 aa15.95■□□□□ 0.14
HMGCS1-203ENST00000507004 KLHL5Q96PQ7 755 aa15.95■□□□□ 0.14
HMGCS1-203ENST00000507004 KIF2CQ99661 725 aa15.95■□□□□ 0.14
HMGCS1-203ENST00000507004 RHOBTB2Q9BYZ6 727 aa15.95■□□□□ 0.14
HMGCS1-203ENST00000507004 RAPGEFL1Q9UHV5 662 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms