RNA–Protein interactions for RNA: ENST00000505450.5

PROM1-206, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PROM1, Length 4,349 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-206ENST00000505450 PSMC6P62333 389 aa8.56□□□□□ -1.04
PROM1-206ENST00000505450 CLUL1Q15846 466 aa8.56□□□□□ -1.04
PROM1-206ENST00000505450 RNF207Q6ZRF8 634 aa8.56□□□□□ -1.04
PROM1-206ENST00000505450 A1CFQ9NQ94 594 aaKnown RBP8.56□□□□□ -1.04
PROM1-206ENST00000505450 PNMA3Q9UL41 463 aa8.56□□□□□ -1.04
PROM1-206ENST00000505450 NOD1Q9Y239 953 aa8.56□□□□□ -1.04
PROM1-206ENST00000505450 GAS7O60861 476 aa8.55□□□□□ -1.04
PROM1-206ENST00000505450 CAMTA2O94983 1202 aa8.55□□□□□ -1.04
PROM1-206ENST00000505450 COMTP21964 271 aa8.55□□□□□ -1.04
PROM1-206ENST00000505450 CASP5P51878 434 aa8.55□□□□□ -1.04
PROM1-206ENST00000505450 GPC5P78333 572 aa8.55□□□□□ -1.04
PROM1-206ENST00000505450 IRX1P78414 480 aaPredicted RBP8.55□□□□□ -1.04
PROM1-206ENST00000505450 ANGEL2Q5VTE6 544 aaKnown RBP8.55□□□□□ -1.04
PROM1-206ENST00000505450 EPM2AIP1Q7L775 607 aaPredicted RBP8.55□□□□□ -1.04
PROM1-206ENST00000505450 ERICH1Q86X53 443 aa8.55□□□□□ -1.04
PROM1-206ENST00000505450 RHOT2Q8IXI1 618 aa8.55□□□□□ -1.04
PROM1-206ENST00000505450 CPXCR1Q8N123 301 aa8.55□□□□□ -1.04
PROM1-206ENST00000505450 ZNF784Q8NCA9 323 aaPredicted RBP8.55□□□□□ -1.04
PROM1-206ENST00000505450 DTX3LQ8TDB6 740 aa8.55□□□□□ -1.04
PROM1-206ENST00000505450 GBP5Q96PP8 586 aa8.55□□□□□ -1.04
PROM1-206ENST00000505450 TRIM4Q9C037 500 aa8.55□□□□□ -1.04
PROM1-206ENST00000505450 PRKAG2Q9UGJ0 569 aa8.55□□□□□ -1.04
PROM1-206ENST00000505450 COL5A2P05997 1499 aaPredicted RBP8.55□□□□□ -1.04
PROM1-206ENST00000505450 PHF2O75151 1096 aa8.55□□□□□ -1.04
PROM1-206ENST00000505450 MED24O75448 989 aa8.55□□□□□ -1.04
PROM1-206ENST00000505450 DNAJC8O75937 253 aaPredicted RBP8.55□□□□□ -1.04
PROM1-206ENST00000505450 TTLL1O95922 423 aa8.55□□□□□ -1.04
PROM1-206ENST00000505450 GHRP10912 638 aa8.55□□□□□ -1.04
PROM1-206ENST00000505450 TARSP26639 723 aaKnown RBP8.55□□□□□ -1.04
PROM1-206ENST00000505450 MAPK4P31152 587 aa8.55□□□□□ -1.04
PROM1-206ENST00000505450 RPL21P46778 160 aaKnown RBP8.55□□□□□ -1.04
PROM1-206ENST00000505450 RWDD2BP57060 319 aa8.55□□□□□ -1.04
PROM1-206ENST00000505450 SP4Q02446 784 aa8.55□□□□□ -1.04
PROM1-206ENST00000505450 KRT17Q04695 432 aa8.55□□□□□ -1.04
PROM1-206ENST00000505450 KCNA1Q09470 495 aa8.55□□□□□ -1.04
PROM1-206ENST00000505450 DNAJC3Q13217 504 aa8.55□□□□□ -1.04
PROM1-206ENST00000505450 XRCC4Q13426 336 aa8.55□□□□□ -1.04
PROM1-206ENST00000505450 MTM1Q13496 603 aa8.55□□□□□ -1.04
PROM1-206ENST00000505450 ECM1Q16610 540 aa8.55□□□□□ -1.04
PROM1-206ENST00000505450 OTUD5Q96G74 571 aa8.55□□□□□ -1.04
PROM1-206ENST00000505450 SH2D3AQ9BRG2 576 aa8.55□□□□□ -1.04
PROM1-206ENST00000505450 INTS2Q9H0H0 1204 aaKnown RBP8.55□□□□□ -1.04
PROM1-206ENST00000505450 ALG13Q9NP73 1137 aaKnown RBP8.55□□□□□ -1.04
PROM1-206ENST00000505450 GGA2Q9UJY4 613 aa8.55□□□□□ -1.04
PROM1-206ENST00000505450 MAPK13O15264 365 aa8.55□□□□□ -1.04
PROM1-206ENST00000505450 LCA5LO95447 670 aa8.55□□□□□ -1.04
PROM1-206ENST00000505450 ARHGAP4P98171 946 aa8.55□□□□□ -1.04
PROM1-206ENST00000505450 ASTE1Q2TB18 679 aaPredicted RBP8.55□□□□□ -1.04
PROM1-206ENST00000505450 SLFN13Q68D06 897 aa8.55□□□□□ -1.04
PROM1-206ENST00000505450 SLC30A5Q8TAD4 765 aa8.55□□□□□ -1.04
PROM1-206ENST00000505450 ATG4AQ8WYN0 398 aa8.55□□□□□ -1.04
PROM1-206ENST00000505450 ARHGEF26Q96DR7 871 aa8.55□□□□□ -1.04
PROM1-206ENST00000505450 SMC6Q96SB8 1091 aa8.55□□□□□ -1.04
PROM1-206ENST00000505450 CARD9Q9H257 536 aa8.55□□□□□ -1.04
PROM1-206ENST00000505450 IKZF4Q9H2S9 585 aa8.55□□□□□ -1.04
PROM1-206ENST00000505450 MED1Q15648 1581 aaPredicted RBP8.54□□□□□ -1.04
PROM1-206ENST00000505450 A0A0G2JND7 137 aa8.54□□□□□ -1.04
PROM1-206ENST00000505450 MIF4GDA9UHW6 222 aaKnown RBP8.54□□□□□ -1.04
PROM1-206ENST00000505450 TROVE2P10155 538 aaKnown RBP eCLIP8.54□□□□□ -1.04
PROM1-206ENST00000505450 EDRF1Q3B7T1 1238 aa8.54□□□□□ -1.04
PROM1-206ENST00000505450 IRF2BP2Q7Z5L9 587 aa8.54□□□□□ -1.04
PROM1-206ENST00000505450 ZC3H18Q86VM9 953 aaKnown RBP8.54□□□□□ -1.04
PROM1-206ENST00000505450 C4orf33Q8N1A6 199 aa8.54□□□□□ -1.04
PROM1-206ENST00000505450 SPDYE1Q8NFV5 336 aaPredicted RBP8.54□□□□□ -1.04
PROM1-206ENST00000505450 PPP1R14CQ8TAE6 165 aa8.54□□□□□ -1.04
PROM1-206ENST00000505450 KRT35Q92764 455 aa8.54□□□□□ -1.04
PROM1-206ENST00000505450 DNAJC19Q96DA6 116 aa8.54□□□□□ -1.04
PROM1-206ENST00000505450 GLIS2Q9BZE0 524 aaPredicted RBP8.54□□□□□ -1.04
PROM1-206ENST00000505450 PARVGQ9HBI0 331 aa8.54□□□□□ -1.04
PROM1-206ENST00000505450 CTNNAL1Q9UBT7 734 aa8.54□□□□□ -1.04
PROM1-206ENST00000505450 HAO1Q9UJM8 370 aa8.54□□□□□ -1.04
PROM1-206ENST00000505450 FOXN3O00409 490 aaPredicted RBP8.54□□□□□ -1.04
PROM1-206ENST00000505450 PDXKO00764 312 aa8.54□□□□□ -1.04
PROM1-206ENST00000505450 PTENP60484 403 aa8.54□□□□□ -1.04
PROM1-206ENST00000505450 ITIH4Q14624 930 aa8.54□□□□□ -1.04
PROM1-206ENST00000505450 CCDC62Q6P9F0 684 aa8.54□□□□□ -1.04
PROM1-206ENST00000505450 C6orf89Q6UWU4 347 aa8.54□□□□□ -1.04
PROM1-206ENST00000505450 ZNF572Q7Z3I7 529 aaPredicted RBP8.54□□□□□ -1.04
PROM1-206ENST00000505450 PDCD7Q8N8D1 485 aaKnown RBP8.54□□□□□ -1.04
PROM1-206ENST00000505450 RNF25Q96BH1 459 aaPredicted RBP8.54□□□□□ -1.04
PROM1-206ENST00000505450 NUP85Q9BW27 656 aa8.54□□□□□ -1.04
PROM1-206ENST00000505450 SAYSD1Q9NPB0 183 aa8.54□□□□□ -1.04
PROM1-206ENST00000505450 HOMER2Q9NSB8 354 aa8.54□□□□□ -1.04
PROM1-206ENST00000505450 SERPINB13Q9UIV8 391 aa8.54□□□□□ -1.04
PROM1-206ENST00000505450 ANAPC7Q9UJX3 599 aa8.54□□□□□ -1.04
PROM1-206ENST00000505450 CEP290O15078 2479 aa8.54□□□□□ -1.04
PROM1-206ENST00000505450 BCL9LQ86UU0 1499 aa8.54□□□□□ -1.04
PROM1-206ENST00000505450 TXNDC9O14530 226 aa8.54□□□□□ -1.04
PROM1-206ENST00000505450 ZBTB5O15062 677 aa8.54□□□□□ -1.04
PROM1-206ENST00000505450 SNX3O60493 162 aa8.54□□□□□ -1.04
PROM1-206ENST00000505450 FMO5P49326 533 aa8.54□□□□□ -1.04
PROM1-206ENST00000505450 QRICH1Q2TAL8 776 aa8.54□□□□□ -1.04
PROM1-206ENST00000505450 PPP1R21Q6ZMI0 780 aa8.54□□□□□ -1.04
PROM1-206ENST00000505450 APBB1IPQ7Z5R6 666 aaPredicted RBP8.54□□□□□ -1.04
PROM1-206ENST00000505450 FBXO11Q86XK2 927 aa8.54□□□□□ -1.04
PROM1-206ENST00000505450 CFAP61Q8NHU2 1237 aa8.54□□□□□ -1.04
PROM1-206ENST00000505450 ZNF564Q8TBZ8 553 aaPredicted RBP8.54□□□□□ -1.04
PROM1-206ENST00000505450 KIFAP3Q92845 792 aa8.54□□□□□ -1.04
PROM1-206ENST00000505450 HAUS1Q96CS2 278 aa8.54□□□□□ -1.04
PROM1-206ENST00000505450 TMEM237Q96Q45 408 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms