RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 CCDC25Q86WR0 208 aa12.8□□□□□ -0.36
UBE3D-206ENST00000505226 RHOT2Q8IXI1 618 aa12.8□□□□□ -0.36
UBE3D-206ENST00000505226 CCDC63Q8NA47 563 aa12.8□□□□□ -0.36
UBE3D-206ENST00000505226 MGARPQ8TDB4 240 aa12.8□□□□□ -0.36
UBE3D-206ENST00000505226 PCIF1Q9H4Z3 704 aa12.8□□□□□ -0.36
UBE3D-206ENST00000505226 CTNNAL1Q9UBT7 734 aa12.8□□□□□ -0.36
UBE3D-206ENST00000505226 RASAL2Q9UJF2 1139 aa12.8□□□□□ -0.36
UBE3D-206ENST00000505226 FRMD4BQ9Y2L6 1034 aa12.8□□□□□ -0.36
UBE3D-206ENST00000505226 PSMD10O75832 226 aa12.79□□□□□ -0.36
UBE3D-206ENST00000505226 GDF11O95390 407 aa12.79□□□□□ -0.36
UBE3D-206ENST00000505226 HLA-DOAP06340 250 aa12.79□□□□□ -0.36
UBE3D-206ENST00000505226 RARGP13631 454 aa12.79□□□□□ -0.36
UBE3D-206ENST00000505226 ZNF76P36508 570 aa12.79□□□□□ -0.36
UBE3D-206ENST00000505226 COILP38432 576 aaPredicted RBP12.79□□□□□ -0.36
UBE3D-206ENST00000505226 CERKLQ49MI3 558 aaPredicted RBP12.79□□□□□ -0.36
UBE3D-206ENST00000505226 FAM178BQ8IXR5 827 aa12.79□□□□□ -0.36
UBE3D-206ENST00000505226 DAW1Q8N136 415 aa12.79□□□□□ -0.36
UBE3D-206ENST00000505226 PLEKHO2Q8TD55 490 aa12.79□□□□□ -0.36
UBE3D-206ENST00000505226 TACO1Q9BSH4 297 aaKnown RBP12.79□□□□□ -0.36
UBE3D-206ENST00000505226 LRRC4BQ9NT99 713 aa12.79□□□□□ -0.36
UBE3D-206ENST00000505226 FGFR1OP2Q9NVK5 253 aa12.79□□□□□ -0.36
UBE3D-206ENST00000505226 NYAP2Q9P242 653 aa12.79□□□□□ -0.36
UBE3D-206ENST00000505226 EMSYQ7Z589 1322 aa12.79□□□□□ -0.36
UBE3D-206ENST00000505226 NDUFB10O96000 172 aa12.79□□□□□ -0.36
UBE3D-206ENST00000505226 GSTA1P08263 222 aa12.79□□□□□ -0.36
UBE3D-206ENST00000505226 ODR4Q5SWX8 454 aa12.79□□□□□ -0.36
UBE3D-206ENST00000505226 MIEF2Q96C03 454 aa12.79□□□□□ -0.36
UBE3D-206ENST00000505226 STRA6Q9BX79 667 aa12.79□□□□□ -0.36
UBE3D-206ENST00000505226 SAMD15Q9P1V8 674 aa12.79□□□□□ -0.36
UBE3D-206ENST00000505226 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.79□□□□□ -0.36
UBE3D-206ENST00000505226 PODXLO00592 558 aa12.79□□□□□ -0.36
UBE3D-206ENST00000505226 EXOC3O60645 756 aa12.79□□□□□ -0.36
UBE3D-206ENST00000505226 GH1P01241 217 aa12.79□□□□□ -0.36
UBE3D-206ENST00000505226 CYP3A4P08684 503 aa12.79□□□□□ -0.36
UBE3D-206ENST00000505226 CHKAP35790 457 aa12.79□□□□□ -0.36
UBE3D-206ENST00000505226 NCALDP61601 193 aa12.79□□□□□ -0.36
UBE3D-206ENST00000505226 GPC5P78333 572 aa12.79□□□□□ -0.36
UBE3D-206ENST00000505226 PPP2R5AQ15172 486 aa12.79□□□□□ -0.36
UBE3D-206ENST00000505226 CYP1B1Q16678 543 aa12.79□□□□□ -0.36
UBE3D-206ENST00000505226 VSTM1Q6UX27 236 aa12.79□□□□□ -0.36
UBE3D-206ENST00000505226 NOP9Q86U38 636 aaKnown RBP12.79□□□□□ -0.36
UBE3D-206ENST00000505226 SLC13A5Q86YT5 568 aaPredicted RBP12.79□□□□□ -0.36
UBE3D-206ENST00000505226 DHX37Q8IY37 1157 aaKnown RBP12.79□□□□□ -0.36
UBE3D-206ENST00000505226 CCDC105Q8IYK2 499 aa12.79□□□□□ -0.36
UBE3D-206ENST00000505226 ELMO3Q96BJ8 720 aa12.79□□□□□ -0.36
UBE3D-206ENST00000505226 CCDC17Q96LX7 622 aa12.79□□□□□ -0.36
UBE3D-206ENST00000505226 ATP6V0A4Q9HBG4 840 aa12.79□□□□□ -0.36
UBE3D-206ENST00000505226 VEZTQ9HBM0 779 aa12.79□□□□□ -0.36
UBE3D-206ENST00000505226 SPATA31A6Q5VVP1 1343 aa12.78□□□□□ -0.36
UBE3D-206ENST00000505226 A8MUI8 341 aa12.78□□□□□ -0.36
UBE3D-206ENST00000505226 MIF4GDA9UHW6 222 aaKnown RBP12.78□□□□□ -0.36
UBE3D-206ENST00000505226 TCP11X1B4DZS4 312 aa12.78□□□□□ -0.36
UBE3D-206ENST00000505226 ACSL3O95573 720 aa12.78□□□□□ -0.36
UBE3D-206ENST00000505226 GYS1P13807 737 aa12.78□□□□□ -0.36
UBE3D-206ENST00000505226 GCLMP48507 274 aa12.78□□□□□ -0.36
UBE3D-206ENST00000505226 GALNTL6Q49A17 601 aa12.78□□□□□ -0.36
UBE3D-206ENST00000505226 MAEAQ7L5Y9 396 aa12.78□□□□□ -0.36
UBE3D-206ENST00000505226 HS2ST1Q7LGA3 356 aa12.78□□□□□ -0.36
UBE3D-206ENST00000505226 UBL4BQ8N7F7 174 aa12.78□□□□□ -0.36
UBE3D-206ENST00000505226 PWWP2AQ96N64 755 aa12.78□□□□□ -0.36
UBE3D-206ENST00000505226 CDC42EP4Q9H3Q1 356 aaKnown RBP12.78□□□□□ -0.36
UBE3D-206ENST00000505226 RBBP6Q7Z6E9 1792 aaKnown RBP12.78□□□□□ -0.36
UBE3D-206ENST00000505226 FOSP01100 380 aaPredicted RBP12.78□□□□□ -0.36
UBE3D-206ENST00000505226 EZRP15311 586 aaKnown RBP12.78□□□□□ -0.36
UBE3D-206ENST00000505226 ADRA2BP18089 450 aa12.78□□□□□ -0.36
UBE3D-206ENST00000505226 SLC8A1P32418 973 aa12.78□□□□□ -0.36
UBE3D-206ENST00000505226 PSEN1P49768 467 aa12.78□□□□□ -0.36
UBE3D-206ENST00000505226 IKQ13123 557 aaPredicted RBP12.78□□□□□ -0.36
UBE3D-206ENST00000505226 TCEAL1Q15170 157 aa12.78□□□□□ -0.36
UBE3D-206ENST00000505226 SYDE2Q5VT97 1194 aa12.78□□□□□ -0.36
UBE3D-206ENST00000505226 LRCH2Q5VUJ6 765 aa12.78□□□□□ -0.36
UBE3D-206ENST00000505226 MFSD5Q6N075 450 aa12.78□□□□□ -0.36
UBE3D-206ENST00000505226 BTNL9Q6UXG8 535 aa12.78□□□□□ -0.36
UBE3D-206ENST00000505226 SPICE1Q8N0Z3 855 aa12.78□□□□□ -0.36
UBE3D-206ENST00000505226 PRCCQ92733 491 aaPredicted RBP12.78□□□□□ -0.36
UBE3D-206ENST00000505226 TUFT1Q9NNX1 390 aa12.78□□□□□ -0.36
UBE3D-206ENST00000505226 DNAJC17Q9NVM6 304 aaKnown RBP12.78□□□□□ -0.36
UBE3D-206ENST00000505226 FAM198AQ9UFP1 575 aa12.78□□□□□ -0.36
UBE3D-206ENST00000505226 MTRF1LQ9UGC7 380 aaKnown RBP12.78□□□□□ -0.36
UBE3D-206ENST00000505226 NOCTQ9UK39 431 aaKnown RBP12.78□□□□□ -0.36
UBE3D-206ENST00000505226 PNMA3Q9UL41 463 aa12.78□□□□□ -0.36
UBE3D-206ENST00000505226 HOXA10P31260 410 aaPredicted RBP12.77□□□□□ -0.36
UBE3D-206ENST00000505226 ICA1Q05084 483 aa12.77□□□□□ -0.36
UBE3D-206ENST00000505226 RRP1BQ14684 758 aaKnown RBP12.77□□□□□ -0.36
UBE3D-206ENST00000505226 SLC47A2Q86VL8 602 aa12.77□□□□□ -0.36
UBE3D-206ENST00000505226 KIF2BQ8N4N8 673 aa12.77□□□□□ -0.36
UBE3D-206ENST00000505226 AGAP11Q8TF27 550 aa12.77□□□□□ -0.36
UBE3D-206ENST00000505226 C1orf54Q8WWF1 131 aa12.77□□□□□ -0.36
UBE3D-206ENST00000505226 RPS6KC1Q96S38 1066 aa12.77□□□□□ -0.36
UBE3D-206ENST00000505226 HERPUD2Q9BSE4 406 aa12.77□□□□□ -0.36
UBE3D-206ENST00000505226 COA1Q9GZY4 146 aa12.77□□□□□ -0.36
UBE3D-206ENST00000505226 TRIM33Q9UPN9 1127 aa12.77□□□□□ -0.36
UBE3D-206ENST00000505226 MYH11P35749 1972 aa12.77□□□□□ -0.36
UBE3D-206ENST00000505226 QSER1Q2KHR3 1735 aa12.77□□□□□ -0.37
UBE3D-206ENST00000505226 A0A1W2PRG0 241 aa12.77□□□□□ -0.37
UBE3D-206ENST00000505226 TMEM120BA0PK00 339 aa12.77□□□□□ -0.37
UBE3D-206ENST00000505226 ZNF268Q14587 947 aaPredicted RBP12.77□□□□□ -0.37
UBE3D-206ENST00000505226 NSMFQ6X4W1 530 aa12.77□□□□□ -0.37
UBE3D-206ENST00000505226 EPS8L1Q8TE68 723 aa12.77□□□□□ -0.37
UBE3D-206ENST00000505226 CBWD1Q9BRT8 395 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms