RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 PLCD3Q8N3E9 789 aa5.44□□□□□ -1.54
LMNB1-208ENST00000504788 SMG8Q8ND04 991 aaKnown RBP5.44□□□□□ -1.54
LMNB1-208ENST00000504788 RASSF8Q8NHQ8 419 aa5.44□□□□□ -1.54
LMNB1-208ENST00000504788 ZBTB45Q96K62 511 aaPredicted RBP5.44□□□□□ -1.54
LMNB1-208ENST00000504788 ACO2Q99798 780 aaKnown RBP5.44□□□□□ -1.54
LMNB1-208ENST00000504788 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.44□□□□□ -1.547e-7■■□□□ 14.3
LMNB1-208ENST00000504788 IFIH1Q9BYX4 1025 aaKnown RBP5.44□□□□□ -1.54
LMNB1-208ENST00000504788 HSD3B7Q9H2F3 369 aa5.44□□□□□ -1.54
LMNB1-208ENST00000504788 SEMA6BQ9H3T3 888 aa5.44□□□□□ -1.54
LMNB1-208ENST00000504788 PDZD7Q9H5P4 517 aa5.44□□□□□ -1.54
LMNB1-208ENST00000504788 SLC39A2Q9NP94 309 aa5.44□□□□□ -1.54
LMNB1-208ENST00000504788 KMT5AQ9NQR1 393 aa5.44□□□□□ -1.54
LMNB1-208ENST00000504788 ZMYND8Q9ULU4 1186 aaPredicted RBP5.44□□□□□ -1.54
LMNB1-208ENST00000504788 PRUNE2Q8WUY3 3088 aa5.44□□□□□ -1.54
LMNB1-208ENST00000504788 COL6A3P12111 3177 aa5.44□□□□□ -1.54
LMNB1-208ENST00000504788 H0YGN5 161 aa5.44□□□□□ -1.54
LMNB1-208ENST00000504788 ENPP3O14638 875 aa5.44□□□□□ -1.54
LMNB1-208ENST00000504788 INPPL1O15357 1258 aa5.44□□□□□ -1.54
LMNB1-208ENST00000504788 EVI5O60447 810 aa5.44□□□□□ -1.54
LMNB1-208ENST00000504788 ZNF623O75123 536 aa5.44□□□□□ -1.54
LMNB1-208ENST00000504788 PRPF6O94906 941 aaKnown RBP5.44□□□□□ -1.54
LMNB1-208ENST00000504788 FAM13AO94988 1023 aa5.44□□□□□ -1.54
LMNB1-208ENST00000504788 IDEP14735 1019 aa5.44□□□□□ -1.54
LMNB1-208ENST00000504788 RAG1P15918 1043 aa5.44□□□□□ -1.54
LMNB1-208ENST00000504788 SCP2P22307 547 aa5.44□□□□□ -1.54
LMNB1-208ENST00000504788 BMP8BP34820 402 aa5.44□□□□□ -1.54
LMNB1-208ENST00000504788 PRCPP42785 496 aa5.44□□□□□ -1.54
LMNB1-208ENST00000504788 MAGEA10P43363 369 aaPredicted RBP5.44□□□□□ -1.54
LMNB1-208ENST00000504788 PHKA2P46019 1235 aa5.44□□□□□ -1.54
LMNB1-208ENST00000504788 AFF1P51825 1210 aaKnown RBP5.44□□□□□ -1.54
LMNB1-208ENST00000504788 EFNA5P52803 228 aa5.44□□□□□ -1.54
LMNB1-208ENST00000504788 MCL1Q07820 350 aa5.44□□□□□ -1.54
LMNB1-208ENST00000504788 PSMD2Q13200 908 aa5.44□□□□□ -1.54
LMNB1-208ENST00000504788 DMP1Q13316 513 aaPredicted RBP5.44□□□□□ -1.54
LMNB1-208ENST00000504788 PPP2R5AQ15172 486 aa5.44□□□□□ -1.54
LMNB1-208ENST00000504788 NAB2Q15742 525 aa5.44□□□□□ -1.54
LMNB1-208ENST00000504788 DPCR1Q3MIW9 517 aa5.44□□□□□ -1.54
LMNB1-208ENST00000504788 XKR4Q5GH76 650 aa5.44□□□□□ -1.54
LMNB1-208ENST00000504788 HERC4Q5GLZ8 1057 aaPredicted RBP5.44□□□□□ -1.54
LMNB1-208ENST00000504788 L1TD1Q5T7N2 865 aaKnown RBP5.44□□□□□ -1.54
LMNB1-208ENST00000504788 ZNF658Q5TYW1 1059 aaPredicted RBP5.44□□□□□ -1.54
LMNB1-208ENST00000504788 FOXR2Q6PJQ5 311 aa5.44□□□□□ -1.54
LMNB1-208ENST00000504788 ALKAL1Q6UXT8 129 aa5.44□□□□□ -1.54
LMNB1-208ENST00000504788 ZPBP2Q6X784 338 aa5.44□□□□□ -1.54
LMNB1-208ENST00000504788 RSPH3Q86UC2 560 aa5.44□□□□□ -1.54
LMNB1-208ENST00000504788 CDR2LQ86X02 465 aaPredicted RBP5.44□□□□□ -1.54
LMNB1-208ENST00000504788 TMEM192Q8IY95 271 aa5.44□□□□□ -1.54
LMNB1-208ENST00000504788 GUF1Q8N442 669 aaKnown RBP5.44□□□□□ -1.54
LMNB1-208ENST00000504788 MYCT1Q8N699 235 aa5.44□□□□□ -1.54
LMNB1-208ENST00000504788 CEP120Q8N960 986 aa5.44□□□□□ -1.54
LMNB1-208ENST00000504788 TRIML1Q8N9V2 468 aa5.44□□□□□ -1.54
LMNB1-208ENST00000504788 NLRP7Q8WX94 980 aa5.44□□□□□ -1.54
LMNB1-208ENST00000504788 HVCN1Q96D96 273 aa5.44□□□□□ -1.54
LMNB1-208ENST00000504788 BORCS6Q96GS4 357 aa5.44□□□□□ -1.54
LMNB1-208ENST00000504788 FBXL18Q96ME1 805 aa5.44□□□□□ -1.54
LMNB1-208ENST00000504788 TARS2Q9BW92 718 aaKnown RBP5.44□□□□□ -1.54
LMNB1-208ENST00000504788 EIF2AQ9BY44 585 aaKnown RBP5.44□□□□□ -1.54
LMNB1-208ENST00000504788 GCOM2Q9BZD3 368 aaPredicted RBP5.44□□□□□ -1.54
LMNB1-208ENST00000504788 LRRC27Q9C0I9 530 aa5.44□□□□□ -1.54
LMNB1-208ENST00000504788 NUP62CLQ9H1M0 184 aa5.44□□□□□ -1.54
LMNB1-208ENST00000504788 IL23AQ9NPF7 189 aa5.44□□□□□ -1.54
LMNB1-208ENST00000504788 RGS18Q9NS28 235 aa5.44□□□□□ -1.54
LMNB1-208ENST00000504788 DMAC2Q9NW81 257 aa5.44□□□□□ -1.54
LMNB1-208ENST00000504788 TBC1D7Q9P0N9 293 aa5.44□□□□□ -1.54
LMNB1-208ENST00000504788 TRAF3IP3Q9Y228 551 aa5.44□□□□□ -1.54
LMNB1-208ENST00000504788 NOD1Q9Y239 953 aa5.44□□□□□ -1.54
LMNB1-208ENST00000504788 TNFSF13BQ9Y275 285 aa5.44□□□□□ -1.54
LMNB1-208ENST00000504788 TRIOBPQ9H2D6 2365 aa5.43□□□□□ -1.54
LMNB1-208ENST00000504788 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.43□□□□□ -1.54
LMNB1-208ENST00000504788 A0A0B4J269 797 aa5.43□□□□□ -1.54
LMNB1-208ENST00000504788 A0A0U1RQF3 1178 aa5.43□□□□□ -1.54
LMNB1-208ENST00000504788 K7ERI5 159 aa5.43□□□□□ -1.54
LMNB1-208ENST00000504788 B4GALT3O60512 393 aa5.43□□□□□ -1.54
LMNB1-208ENST00000504788 RPS6KA5O75582 802 aa5.43□□□□□ -1.54
LMNB1-208ENST00000504788 PRKCBP05771 671 aa5.43□□□□□ -1.54
LMNB1-208ENST00000504788 PFKMP08237 780 aa5.43□□□□□ -1.54
LMNB1-208ENST00000504788 ACRP10323 421 aa5.43□□□□□ -1.54
LMNB1-208ENST00000504788 WDR5P61964 334 aaKnown RBP5.43□□□□□ -1.54
LMNB1-208ENST00000504788 DEFB103AP81534 67 aa5.43□□□□□ -1.54
LMNB1-208ENST00000504788 TFDP1Q14186 410 aa5.43□□□□□ -1.54
LMNB1-208ENST00000504788 NFIL3Q16649 462 aa5.43□□□□□ -1.54
LMNB1-208ENST00000504788 ZBTB41Q5SVQ8 909 aa5.43□□□□□ -1.54
LMNB1-208ENST00000504788 SCARA3Q6AZY7 606 aa5.43□□□□□ -1.54
LMNB1-208ENST00000504788 TTI2Q6NXR4 508 aa5.43□□□□□ -1.54
LMNB1-208ENST00000504788 CNKSR3Q6P9H4 555 aa5.43□□□□□ -1.54
LMNB1-208ENST00000504788 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.43□□□□□ -1.546e-6■□□□□ 8.1
LMNB1-208ENST00000504788 AGMOQ6ZNB7 445 aa5.43□□□□□ -1.54
LMNB1-208ENST00000504788 LRRC55Q6ZSA7 311 aa5.43□□□□□ -1.54
LMNB1-208ENST00000504788 FAM43BQ6ZT52 329 aaPredicted RBP5.43□□□□□ -1.54
LMNB1-208ENST00000504788 ZNF365Q70YC5 407 aa5.43□□□□□ -1.54
LMNB1-208ENST00000504788 MRPL10Q7Z7H8 261 aaKnown RBP5.43□□□□□ -1.54
LMNB1-208ENST00000504788 IRF2BP1Q8IU81 584 aa5.43□□□□□ -1.54
LMNB1-208ENST00000504788 C12orf56Q8IXR9 622 aa5.43□□□□□ -1.54
LMNB1-208ENST00000504788 CCDC65Q8IXS2 484 aa5.43□□□□□ -1.54
LMNB1-208ENST00000504788 CCDC155Q8N6L0 562 aa5.43□□□□□ -1.54
LMNB1-208ENST00000504788 CXorf38Q8TB03 319 aa5.43□□□□□ -1.54
LMNB1-208ENST00000504788 PLEKHO2Q8TD55 490 aa5.43□□□□□ -1.54
LMNB1-208ENST00000504788 HERVK_113Q902F9 699 aa5.43□□□□□ -1.54
LMNB1-208ENST00000504788 ZNF689Q96CS4 500 aaPredicted RBP5.43□□□□□ -1.54
LMNB1-208ENST00000504788 CPB2Q96IY4 423 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms