RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 DMP1Q13316 513 aaPredicted RBP12.54□□□□□ -0.4
USP46-204ENST00000503060 KIAA0753Q2KHM9 967 aa12.54□□□□□ -0.4
USP46-204ENST00000503060 MIS18BP1Q6P0N0 1132 aa12.54□□□□□ -0.4
USP46-204ENST00000503060 CAGE1Q8TC20 777 aa12.54□□□□□ -0.4
USP46-204ENST00000503060 SPIRE2Q8WWL2 714 aa12.54□□□□□ -0.4
USP46-204ENST00000503060 BSNDQ8WZ55 320 aa12.54□□□□□ -0.4
USP46-204ENST00000503060 RHOXF2Q9BQY4 288 aa12.54□□□□□ -0.4
USP46-204ENST00000503060 ELP3Q9H9T3 547 aa12.54□□□□□ -0.4
USP46-204ENST00000503060 FBXO40Q9UH90 709 aa12.54□□□□□ -0.4
USP46-204ENST00000503060 TBX20Q9UMR3 447 aa12.54□□□□□ -0.4
USP46-204ENST00000503060 PFASO15067 1338 aa12.54□□□□□ -0.4
USP46-204ENST00000503060 EMSYQ7Z589 1322 aa12.54□□□□□ -0.4
USP46-204ENST00000503060 PDE2AO00408 941 aaPredicted RBP12.54□□□□□ -0.4
USP46-204ENST00000503060 SORBS3O60504 671 aa12.54□□□□□ -0.4
USP46-204ENST00000503060 SUPT20HL2P0C7V6 817 aa12.54□□□□□ -0.4
USP46-204ENST00000503060 PNMA6AP0CW24 399 aaPredicted RBP12.54□□□□□ -0.4
USP46-204ENST00000503060 SOX5P35711 763 aa12.54□□□□□ -0.4
USP46-204ENST00000503060 DLG4P78352 724 aa12.54□□□□□ -0.4
USP46-204ENST00000503060 SP2Q02086 613 aa12.54□□□□□ -0.4
USP46-204ENST00000503060 PRKCEQ02156 737 aa12.54□□□□□ -0.4
USP46-204ENST00000503060 E2F5Q15329 346 aa12.54□□□□□ -0.4
USP46-204ENST00000503060 MAP4K3Q8IVH8 894 aa12.54□□□□□ -0.4
USP46-204ENST00000503060 VPS37AQ8NEZ2 397 aa12.54□□□□□ -0.4
USP46-204ENST00000503060 KIFC3Q9BVG8 833 aa12.54□□□□□ -0.4
USP46-204ENST00000503060 C17orf75Q9HAS0 396 aa12.54□□□□□ -0.4
USP46-204ENST00000503060 ARFGAP3Q9NP61 516 aa12.54□□□□□ -0.4
USP46-204ENST00000503060 KMT5AQ9NQR1 393 aa12.54□□□□□ -0.4
USP46-204ENST00000503060 PDLIM7Q9NR12 457 aa12.54□□□□□ -0.4
USP46-204ENST00000503060 DONSONQ9NYP3 566 aa12.54□□□□□ -0.4
USP46-204ENST00000503060 APEX2Q9UBZ4 518 aa12.54□□□□□ -0.4
USP46-204ENST00000503060 SEPT9Q9UHD8 586 aaPredicted RBP12.54□□□□□ -0.4
USP46-204ENST00000503060 NAGPAQ9UK23 515 aa12.54□□□□□ -0.4
USP46-204ENST00000503060 NENFQ9UMX5 172 aa12.54□□□□□ -0.4
USP46-204ENST00000503060 G3BP2Q9UN86 482 aaKnown RBP12.54□□□□□ -0.4
USP46-204ENST00000503060 HYOU1Q9Y4L1 999 aa12.54□□□□□ -0.4
USP46-204ENST00000503060 DOCK5Q9H7D0 1870 aa12.54□□□□□ -0.4
USP46-204ENST00000503060 ARID2Q68CP9 1835 aa12.54□□□□□ -0.4
USP46-204ENST00000503060 A0A0G2JLL6 359 aaPredicted RBP12.53□□□□□ -0.4
USP46-204ENST00000503060 BTNL10A8MVZ5 291 aa12.53□□□□□ -0.4
USP46-204ENST00000503060 F8VZ95 297 aa12.53□□□□□ -0.4
USP46-204ENST00000503060 KIF3CO14782 793 aa12.53□□□□□ -0.4
USP46-204ENST00000503060 ATP8B1O43520 1251 aa12.53□□□□□ -0.4
USP46-204ENST00000503060 N4BP1O75113 896 aaKnown RBP12.53□□□□□ -0.4
USP46-204ENST00000503060 DGAT1O75907 488 aa12.53□□□□□ -0.4
USP46-204ENST00000503060 GFPT2O94808 682 aa12.53□□□□□ -0.4
USP46-204ENST00000503060 ALDH5A1P51649 535 aaPredicted RBP12.53□□□□□ -0.4
USP46-204ENST00000503060 PPATQ06203 517 aa12.53□□□□□ -0.4
USP46-204ENST00000503060 FSTL1Q12841 308 aa12.53□□□□□ -0.4
USP46-204ENST00000503060 DRAP1Q14919 205 aaPredicted RBP12.53□□□□□ -0.4
USP46-204ENST00000503060 C16orf87Q6PH81 154 aa12.53□□□□□ -0.4
USP46-204ENST00000503060 PRRT2Q7Z6L0 340 aaPredicted RBP12.53□□□□□ -0.4
USP46-204ENST00000503060 NOP9Q86U38 636 aaKnown RBP12.53□□□□□ -0.4
USP46-204ENST00000503060 VPS36Q86VN1 386 aa12.53□□□□□ -0.4
USP46-204ENST00000503060 ANKRD13BQ86YJ7 626 aa12.53□□□□□ -0.4
USP46-204ENST00000503060 ZSWIM2Q8NEG5 633 aa12.53□□□□□ -0.4
USP46-204ENST00000503060 MCPH1Q8NEM0 835 aa12.53□□□□□ -0.4
USP46-204ENST00000503060 LMO3Q8TAP4 145 aa12.53□□□□□ -0.4
USP46-204ENST00000503060 OSBPL9Q96SU4 736 aa12.53□□□□□ -0.4
USP46-204ENST00000503060 NTPCRQ9BSD7 190 aaKnown RBP12.53□□□□□ -0.4
USP46-204ENST00000503060 XPNPEP1Q9NQW7 623 aa12.53□□□□□ -0.4
USP46-204ENST00000503060 IGSF9BQ9UPX0 1349 aa12.53□□□□□ -0.4
USP46-204ENST00000503060 DENND3A2RUS2 1198 aa12.53□□□□□ -0.4
USP46-204ENST00000503060 ANKRD63C9JTQ0 380 aa12.53□□□□□ -0.4
USP46-204ENST00000503060 P4HA2O15460 535 aa12.53□□□□□ -0.4
USP46-204ENST00000503060 TIMM44O43615 452 aa12.53□□□□□ -0.4
USP46-204ENST00000503060 NCK2O43639 380 aa12.53□□□□□ -0.4
USP46-204ENST00000503060 EVI5O60447 810 aa12.53□□□□□ -0.4
USP46-204ENST00000503060 TCP1P17987 556 aaKnown RBP12.53□□□□□ -0.4
USP46-204ENST00000503060 SOX10P56693 466 aa12.53□□□□□ -0.4
USP46-204ENST00000503060 PPP3CAQ08209 521 aa12.53□□□□□ -0.4
USP46-204ENST00000503060 XKR3Q5GH77 459 aa12.53□□□□□ -0.4
USP46-204ENST00000503060 C1orf220Q5T0J3 134 aa12.53□□□□□ -0.4
USP46-204ENST00000503060 NFRKBQ6P4R8 1299 aa12.53□□□□□ -0.4
USP46-204ENST00000503060 ALKBH5Q6P6C2 394 aaKnown RBP12.53□□□□□ -0.4
USP46-204ENST00000503060 CREG2Q8IUH2 290 aa12.53□□□□□ -0.4
USP46-204ENST00000503060 KRT222Q8N1A0 295 aa12.53□□□□□ -0.4
USP46-204ENST00000503060 PLEKHO2Q8TD55 490 aa12.53□□□□□ -0.4
USP46-204ENST00000503060 OTUD5Q96G74 571 aa12.53□□□□□ -0.4
USP46-204ENST00000503060 TLR10Q9BXR5 811 aa12.53□□□□□ -0.4
USP46-204ENST00000503060 SPATC1LQ9H0A9 340 aa12.53□□□□□ -0.4
USP46-204ENST00000503060 CYP26B1Q9NR63 512 aa12.53□□□□□ -0.4
USP46-204ENST00000503060 ATP8B3O60423 1300 aa12.53□□□□□ -0.4
USP46-204ENST00000503060 MYH10P35580 1976 aa12.52□□□□□ -0.4
USP46-204ENST00000503060 TLDC2A0PJX2 215 aa12.52□□□□□ -0.4
USP46-204ENST00000503060 TUBBP07437 444 aa12.52□□□□□ -0.4
USP46-204ENST00000503060 ADRB2P07550 413 aa12.52□□□□□ -0.4
USP46-204ENST00000503060 RFX1P22670 979 aa12.52□□□□□ -0.4
USP46-204ENST00000503060 ADSSP30520 456 aa12.52□□□□□ -0.4
USP46-204ENST00000503060 RTP1P59025 263 aa12.52□□□□□ -0.4
USP46-204ENST00000503060 C9orf131Q5VYM1 1079 aa12.52□□□□□ -0.4
USP46-204ENST00000503060 SEPT14Q6ZU15 432 aa12.52□□□□□ -0.4
USP46-204ENST00000503060 CYFIP1Q7L576 1253 aa12.52□□□□□ -0.4
USP46-204ENST00000503060 ERO1BQ86YB8 467 aa12.52□□□□□ -0.4
USP46-204ENST00000503060 COG1Q8WTW3 980 aa12.52□□□□□ -0.4
USP46-204ENST00000503060 CLMNQ96JQ2 1002 aa12.52□□□□□ -0.4
USP46-204ENST00000503060 GPR88Q9GZN0 384 aa12.52□□□□□ -0.4
USP46-204ENST00000503060 ATP6V0A4Q9HBG4 840 aa12.52□□□□□ -0.4
USP46-204ENST00000503060 TSKSQ9UJT2 592 aa12.52□□□□□ -0.4
USP46-204ENST00000503060 PCDHGC5Q9Y5F6 944 aa12.52□□□□□ -0.4
USP46-204ENST00000503060 GOLGA8IPA6NC78 632 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms