RNA–Protein interactions for RNA: ENST00000498613.1

TMEM39B-209, Transcript of transmembrane protein 39B, humanhuman

TSL 3

Gene TMEM39B, Length 854 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-209ENST00000498613 ENGASEQ8NFI3 743 aa13.98□□□□□ -0.17
TMEM39B-209ENST00000498613 YME1L1Q96TA2 773 aa13.98□□□□□ -0.17
TMEM39B-209ENST00000498613 KIFC3Q9BVG8 833 aa13.98□□□□□ -0.17
TMEM39B-209ENST00000498613 OSBPL7Q9BZF2 842 aa13.98□□□□□ -0.17
TMEM39B-209ENST00000498613 FAM105AQ9NUU6 356 aa13.98□□□□□ -0.17
TMEM39B-209ENST00000498613 MTMR10Q9NXD2 777 aa13.98□□□□□ -0.17
TMEM39B-209ENST00000498613 TBC1D7Q9P0N9 293 aa13.98□□□□□ -0.17
TMEM39B-209ENST00000498613 CXXC1Q9P0U4 656 aaPredicted RBP13.98□□□□□ -0.17
TMEM39B-209ENST00000498613 PCDHB2Q9Y5E7 798 aa13.98□□□□□ -0.17
TMEM39B-209ENST00000498613 PCDHA11Q9Y5I1 949 aa13.98□□□□□ -0.17
TMEM39B-209ENST00000498613 ARID2Q68CP9 1835 aa13.98□□□□□ -0.17
TMEM39B-209ENST00000498613 CNTNAP2Q9UHC6 1331 aa13.97□□□□□ -0.17
TMEM39B-209ENST00000498613 SCN5AQ14524 2016 aa13.97□□□□□ -0.17
TMEM39B-209ENST00000498613 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.97□□□□□ -0.17
TMEM39B-209ENST00000498613 FRMD3A2A2Y4 597 aa13.97□□□□□ -0.17
TMEM39B-209ENST00000498613 C9IYK1 514 aa13.97□□□□□ -0.17
TMEM39B-209ENST00000498613 HNRNPDLO14979 420 aaKnown RBP13.97□□□□□ -0.17
TMEM39B-209ENST00000498613 CLDN3O15551 220 aa13.97□□□□□ -0.17
TMEM39B-209ENST00000498613 GADD45BO75293 160 aaPredicted RBP13.97□□□□□ -0.17
TMEM39B-209ENST00000498613 NR1I2O75469 434 aa13.97□□□□□ -0.17
TMEM39B-209ENST00000498613 TOM1L1O75674 476 aa13.97□□□□□ -0.17
TMEM39B-209ENST00000498613 GJB5O95377 273 aa13.97□□□□□ -0.17
TMEM39B-209ENST00000498613 RPN1P04843 607 aaKnown RBP13.97□□□□□ -0.17
TMEM39B-209ENST00000498613 ITGA4P13612 1032 aa13.97□□□□□ -0.17
TMEM39B-209ENST00000498613 NMT1P30419 496 aaKnown RBP13.97□□□□□ -0.17
TMEM39B-209ENST00000498613 HOXA11P31270 313 aaPredicted RBP13.97□□□□□ -0.17
TMEM39B-209ENST00000498613 COASYQ13057 564 aa13.97□□□□□ -0.17
TMEM39B-209ENST00000498613 SNW1Q13573 536 aaKnown RBP13.97□□□□□ -0.17
TMEM39B-209ENST00000498613 DCAF4L1Q3SXM0 396 aa13.97□□□□□ -0.17
TMEM39B-209ENST00000498613 FAM26FQ5R3K3 315 aa13.97□□□□□ -0.17
TMEM39B-209ENST00000498613 FAM117BQ6P1L5 589 aa13.97□□□□□ -0.17
TMEM39B-209ENST00000498613 ECHDC2Q86YB7 292 aa13.97□□□□□ -0.17
TMEM39B-209ENST00000498613 KCNN1Q92952 543 aa13.97□□□□□ -0.17
TMEM39B-209ENST00000498613 SMARCE1Q969G3 411 aa13.97□□□□□ -0.17
TMEM39B-209ENST00000498613 VWCEQ96DN2 955 aa13.97□□□□□ -0.17
TMEM39B-209ENST00000498613 CPB2Q96IY4 423 aa13.97□□□□□ -0.17
TMEM39B-209ENST00000498613 GSDMAQ96QA5 445 aa13.97□□□□□ -0.17
TMEM39B-209ENST00000498613 CCDC113Q9H0I3 377 aa13.97□□□□□ -0.17
TMEM39B-209ENST00000498613 KANSL3Q9P2N6 904 aa13.97□□□□□ -0.17
TMEM39B-209ENST00000498613 TNFSF13BQ9Y275 285 aa13.97□□□□□ -0.17
TMEM39B-209ENST00000498613 LTBP2Q14767 1821 aa13.97□□□□□ -0.17
TMEM39B-209ENST00000498613 TANC1Q9C0D5 1861 aa13.96□□□□□ -0.17
TMEM39B-209ENST00000498613 CARNS1A5YM72 827 aa13.96□□□□□ -0.17
TMEM39B-209ENST00000498613 MBD3O95983 291 aa13.96□□□□□ -0.17
TMEM39B-209ENST00000498613 YARSP54577 528 aaKnown RBP13.96□□□□□ -0.17
TMEM39B-209ENST00000498613 GLB1LQ6UWU2 654 aa13.96□□□□□ -0.17
TMEM39B-209ENST00000498613 ACO2Q99798 780 aaKnown RBP13.96□□□□□ -0.17
TMEM39B-209ENST00000498613 CCDC94Q9BW85 323 aaPredicted RBP13.96□□□□□ -0.17
TMEM39B-209ENST00000498613 SLC28A3Q9HAS3 691 aa13.96□□□□□ -0.17
TMEM39B-209ENST00000498613 MYH11P35749 1972 aa13.96□□□□□ -0.18
TMEM39B-209ENST00000498613 TET1Q8NFU7 2136 aa13.96□□□□□ -0.18
TMEM39B-209ENST00000498613 B4GALT5O43286 388 aa13.95□□□□□ -0.18
TMEM39B-209ENST00000498613 MGEA5O60502 916 aa13.95□□□□□ -0.18
TMEM39B-209ENST00000498613 NPTXRO95502 500 aa13.95□□□□□ -0.18
TMEM39B-209ENST00000498613 MCF2P10911 925 aa13.95□□□□□ -0.18
TMEM39B-209ENST00000498613 SNRPFP62306 86 aaKnown RBP13.95□□□□□ -0.18
TMEM39B-209ENST00000498613 DEFB103AP81534 67 aa13.95□□□□□ -0.18
TMEM39B-209ENST00000498613 DPYDQ12882 1025 aa13.95□□□□□ -0.18
TMEM39B-209ENST00000498613 STIM1Q13586 685 aa13.95□□□□□ -0.18
TMEM39B-209ENST00000498613 BTG3Q14201 252 aaPredicted RBP13.95□□□□□ -0.18
TMEM39B-209ENST00000498613 KCNB1Q14721 858 aa13.95□□□□□ -0.18
TMEM39B-209ENST00000498613 AMHR2Q16671 573 aa13.95□□□□□ -0.18
TMEM39B-209ENST00000498613 KMT5BQ4FZB7 885 aa13.95□□□□□ -0.18
TMEM39B-209ENST00000498613 ZC2HC1CQ53FD0 456 aaPredicted RBP13.95□□□□□ -0.18
TMEM39B-209ENST00000498613 L1TD1Q5T7N2 865 aaKnown RBP13.95□□□□□ -0.18
TMEM39B-209ENST00000498613 MPZL3Q6UWV2 235 aa13.95□□□□□ -0.18
TMEM39B-209ENST00000498613 HS2ST1Q7LGA3 356 aa13.95□□□□□ -0.18
TMEM39B-209ENST00000498613 MRPL10Q7Z7H8 261 aaKnown RBP13.95□□□□□ -0.18
TMEM39B-209ENST00000498613 GRAMD1CQ8IYS0 662 aa13.95□□□□□ -0.18
TMEM39B-209ENST00000498613 URGCPQ8TCY9 931 aa13.95□□□□□ -0.18
TMEM39B-209ENST00000498613 FAM193BQ96PV7 902 aaPredicted RBP13.95□□□□□ -0.18
TMEM39B-209ENST00000498613 TARS2Q9BW92 718 aaKnown RBP13.95□□□□□ -0.18
TMEM39B-209ENST00000498613 COL25A1Q9BXS0 654 aaPredicted RBP13.95□□□□□ -0.18
TMEM39B-209ENST00000498613 MRPL9Q9BYD2 267 aaKnown RBP13.95□□□□□ -0.18
TMEM39B-209ENST00000498613 AAASQ9NRG9 546 aa13.95□□□□□ -0.18
TMEM39B-209ENST00000498613 TOPORSQ9NS56 1045 aaPredicted RBP13.95□□□□□ -0.18
TMEM39B-209ENST00000498613 PARP2Q9UGN5 583 aa13.95□□□□□ -0.18
TMEM39B-209ENST00000498613 ADGRA3Q8IWK6 1321 aa13.94□□□□□ -0.18
TMEM39B-209ENST00000498613 KIAA0391O15091 583 aaKnown RBP13.94□□□□□ -0.18
TMEM39B-209ENST00000498613 EIF3DO15371 548 aaKnown RBP eCLIP13.94□□□□□ -0.18
TMEM39B-209ENST00000498613 DGKIO75912 1065 aa13.94□□□□□ -0.18
TMEM39B-209ENST00000498613 LDHAP00338 332 aaKnown RBP13.94□□□□□ -0.18
TMEM39B-209ENST00000498613 PPP1R2P41236 205 aa13.94□□□□□ -0.18
TMEM39B-209ENST00000498613 RNASELQ05823 741 aaKnown RBP13.94□□□□□ -0.18
TMEM39B-209ENST00000498613 TCTN1Q2MV58 587 aa13.94□□□□□ -0.18
TMEM39B-209ENST00000498613 ZNF568Q3ZCX4 644 aa13.94□□□□□ -0.18
TMEM39B-209ENST00000498613 SPOUT1Q5T280 376 aaKnown RBP13.94□□□□□ -0.18
TMEM39B-209ENST00000498613 NT5DC1Q5TFE4 455 aa13.94□□□□□ -0.18
TMEM39B-209ENST00000498613 ZBTB33Q86T24 672 aa13.94□□□□□ -0.18
TMEM39B-209ENST00000498613 FIBCD1Q8N539 461 aa13.94□□□□□ -0.18
TMEM39B-209ENST00000498613 GOLGA5Q8TBA6 731 aa13.94□□□□□ -0.18
TMEM39B-209ENST00000498613 ZNF507Q8TCN5 953 aa13.94□□□□□ -0.18
TMEM39B-209ENST00000498613 ACAP3Q96P50 834 aa13.94□□□□□ -0.18
TMEM39B-209ENST00000498613 TMEM117Q9H0C3 514 aa13.94□□□□□ -0.18
TMEM39B-209ENST00000498613 PDZD7Q9H5P4 517 aa13.94□□□□□ -0.18
TMEM39B-209ENST00000498613 SLC39A2Q9NP94 309 aa13.94□□□□□ -0.18
TMEM39B-209ENST00000498613 LMBRD1Q9NUN5 540 aa13.94□□□□□ -0.18
TMEM39B-209ENST00000498613 CGNQ9P2M7 1197 aaKnown RBP13.94□□□□□ -0.18
TMEM39B-209ENST00000498613 ANKFY1Q9P2R3 1169 aa13.94□□□□□ -0.18
TMEM39B-209ENST00000498613 GIT1Q9Y2X7 761 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms