RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 REV3LO60673 3130 aa16.94■□□□□ 0.3
NUP50-219ENST00000497960 A0A1B0GUA9 196 aa16.93■□□□□ 0.3
NUP50-219ENST00000497960 GRXCR2A6NFK2 248 aa16.93■□□□□ 0.3
NUP50-219ENST00000497960 E9PMD0 336 aa16.93■□□□□ 0.3
NUP50-219ENST00000497960 BRD1O95696 1058 aa16.93■□□□□ 0.3
NUP50-219ENST00000497960 GALTP07902 379 aa16.93■□□□□ 0.3
NUP50-219ENST00000497960 FAM187BQ17R55 369 aa16.93■□□□□ 0.3
NUP50-219ENST00000497960 FAM173BQ6P4H8 233 aa16.93■□□□□ 0.3
NUP50-219ENST00000497960 SLC27A1Q6PCB7 646 aa16.93■□□□□ 0.3
NUP50-219ENST00000497960 CDK5RAP3Q96JB5 506 aa16.93■□□□□ 0.3
NUP50-219ENST00000497960 MMTAG2Q9BU76 263 aaKnown RBP16.93■□□□□ 0.3
NUP50-219ENST00000497960 APOL6Q9BWW8 343 aa16.93■□□□□ 0.3
NUP50-219ENST00000497960 NT5C3AQ9H0P0 336 aa16.93■□□□□ 0.3
NUP50-219ENST00000497960 FZD8Q9H461 694 aa16.93■□□□□ 0.3
NUP50-219ENST00000497960 PLXNA4Q9HCM2 1894 aa16.93■□□□□ 0.3
NUP50-219ENST00000497960 ATG2AQ2TAZ0 1938 aa16.92■□□□□ 0.3
NUP50-219ENST00000497960 PER2O15055 1255 aa16.92■□□□□ 0.3
NUP50-219ENST00000497960 LINC01565O15544 149 aa16.92■□□□□ 0.3
NUP50-219ENST00000497960 TBX10O75333 385 aa16.92■□□□□ 0.3
NUP50-219ENST00000497960 NPTXRO95502 500 aa16.92■□□□□ 0.3
NUP50-219ENST00000497960 POMCP01189 267 aa16.92■□□□□ 0.3
NUP50-219ENST00000497960 PRKCBP05771 671 aa16.92■□□□□ 0.3
NUP50-219ENST00000497960 IL9P15248 144 aa16.92■□□□□ 0.3
NUP50-219ENST00000497960 LIG1P18858 919 aa16.92■□□□□ 0.3
NUP50-219ENST00000497960 EFNA5P52803 228 aa16.92■□□□□ 0.3
NUP50-219ENST00000497960 NUCB2P80303 420 aa16.92■□□□□ 0.3
NUP50-219ENST00000497960 DLX2Q07687 328 aaPredicted RBP16.92■□□□□ 0.3
NUP50-219ENST00000497960 PRPF4BQ13523 1007 aaKnown RBP16.92■□□□□ 0.3
NUP50-219ENST00000497960 SMC1AQ14683 1233 aaKnown RBP16.92■□□□□ 0.3
NUP50-219ENST00000497960 CLUL1Q15846 466 aa16.92■□□□□ 0.3
NUP50-219ENST00000497960 DUSP6Q16828 381 aa16.92■□□□□ 0.3
NUP50-219ENST00000497960 FOXD4L6Q3SYB3 417 aaPredicted RBP16.92■□□□□ 0.3
NUP50-219ENST00000497960 FOXD4L3Q6VB84 417 aaPredicted RBP16.92■□□□□ 0.3
NUP50-219ENST00000497960 KCTD17Q8N5Z5 321 aa16.92■□□□□ 0.3
NUP50-219ENST00000497960 IGSF21Q96ID5 467 aa16.92■□□□□ 0.3
NUP50-219ENST00000497960 IPO9Q96P70 1041 aaKnown RBP16.92■□□□□ 0.3
NUP50-219ENST00000497960 GAD1Q99259 594 aa16.92■□□□□ 0.3
NUP50-219ENST00000497960 TMEM175Q9BSA9 504 aa16.92■□□□□ 0.3
NUP50-219ENST00000497960 CD207Q9UJ71 328 aa16.92■□□□□ 0.3
NUP50-219ENST00000497960 GIT1Q9Y2X7 761 aa16.92■□□□□ 0.3
NUP50-219ENST00000497960 HES2Q9Y543 173 aa16.92■□□□□ 0.3
NUP50-219ENST00000497960 ACKR2O00590 384 aa16.91■□□□□ 0.3
NUP50-219ENST00000497960 N4BP3O15049 544 aa16.91■□□□□ 0.3
NUP50-219ENST00000497960 ALDH2P05091 517 aa16.91■□□□□ 0.3
NUP50-219ENST00000497960 SRGAP2BP0DMP2 458 aa16.91■□□□□ 0.3
NUP50-219ENST00000497960 CA8P35219 290 aa16.91■□□□□ 0.3
NUP50-219ENST00000497960 SLC11A1P49279 550 aa16.91■□□□□ 0.3
NUP50-219ENST00000497960 DDX53Q86TM3 631 aaKnown RBP16.91■□□□□ 0.3
NUP50-219ENST00000497960 CDR2LQ86X02 465 aaPredicted RBP16.91■□□□□ 0.3
NUP50-219ENST00000497960 ZNF280BQ86YH2 543 aa16.91■□□□□ 0.3
NUP50-219ENST00000497960 VPS52Q8N1B4 723 aa16.91■□□□□ 0.3
NUP50-219ENST00000497960 TMEM87AQ8NBN3 555 aa16.91■□□□□ 0.3
NUP50-219ENST00000497960 AK8Q96MA6 479 aa16.91■□□□□ 0.3
NUP50-219ENST00000497960 ZNF396Q96N95 335 aaPredicted RBP16.91■□□□□ 0.3
NUP50-219ENST00000497960 ADPGKQ9BRR6 497 aa16.91■□□□□ 0.3
NUP50-219ENST00000497960 RNF39Q9H2S5 420 aa16.91■□□□□ 0.3
NUP50-219ENST00000497960 NXF3Q9H4D5 531 aaKnown RBP16.91■□□□□ 0.3
NUP50-219ENST00000497960 POLD4Q9HCU8 107 aa16.91■□□□□ 0.3
NUP50-219ENST00000497960 DNAJB4Q9UDY4 337 aa16.91■□□□□ 0.3
NUP50-219ENST00000497960 FAN1Q9Y2M0 1017 aa16.91■□□□□ 0.3
NUP50-219ENST00000497960 ARL5CA6NH57 179 aa16.9■□□□□ 0.3
NUP50-219ENST00000497960 CCDC169A6NNP5 214 aa16.9■□□□□ 0.3
NUP50-219ENST00000497960 INPPL1O15357 1258 aa16.9■□□□□ 0.3
NUP50-219ENST00000497960 SLC26A4O43511 780 aa16.9■□□□□ 0.3
NUP50-219ENST00000497960 HIP1RO75146 1068 aa16.9■□□□□ 0.3
NUP50-219ENST00000497960 DDHD2O94830 711 aa16.9■□□□□ 0.3
NUP50-219ENST00000497960 SSBP05455 408 aaKnown RBP eCLIP16.9■□□□□ 0.3
NUP50-219ENST00000497960 DDIT3P35638 169 aa16.9■□□□□ 0.3
NUP50-219ENST00000497960 MLH1P40692 756 aa16.9■□□□□ 0.3
NUP50-219ENST00000497960 AFF1P51825 1210 aaKnown RBP16.9■□□□□ 0.3
NUP50-219ENST00000497960 DMP1Q13316 513 aaPredicted RBP16.9■□□□□ 0.3
NUP50-219ENST00000497960 SMAD4Q13485 552 aaKnown RBP16.9■□□□□ 0.3
NUP50-219ENST00000497960 HYIQ5T013 277 aa16.9■□□□□ 0.3
NUP50-219ENST00000497960 RINT1Q6NUQ1 792 aa16.9■□□□□ 0.3
NUP50-219ENST00000497960 KCNK18Q7Z418 384 aa16.9■□□□□ 0.3
NUP50-219ENST00000497960 TMEM173Q86WV6 379 aaPredicted RBP16.9■□□□□ 0.3
NUP50-219ENST00000497960 FAM178BQ8IXR5 827 aa16.9■□□□□ 0.3
NUP50-219ENST00000497960 MRPL43Q8N983 215 aaKnown RBP16.9■□□□□ 0.3
NUP50-219ENST00000497960 DRC1Q96MC2 740 aa16.9■□□□□ 0.3
NUP50-219ENST00000497960 PLIN2Q99541 437 aa16.9■□□□□ 0.3
NUP50-219ENST00000497960 KIFC3Q9BVG8 833 aa16.9■□□□□ 0.3
NUP50-219ENST00000497960 RUSC1Q9BVN2 902 aa16.9■□□□□ 0.3
NUP50-219ENST00000497960 TIPINQ9BVW5 301 aa16.9■□□□□ 0.3
NUP50-219ENST00000497960 STK39Q9UEW8 545 aa16.9■□□□□ 0.3
NUP50-219ENST00000497960 PARP2Q9UGN5 583 aa16.9■□□□□ 0.3
NUP50-219ENST00000497960 CIZ1Q9ULV3 898 aaPredicted RBP16.9■□□□□ 0.3
NUP50-219ENST00000497960 TCHHQ07283 1943 aa16.9■□□□□ 0.3
NUP50-219ENST00000497960 HIDE1A8MVS5 230 aa16.89■□□□□ 0.29
NUP50-219ENST00000497960 K7ERI5 159 aa16.89■□□□□ 0.29
NUP50-219ENST00000497960 NR1I2O75469 434 aa16.89■□□□□ 0.29
NUP50-219ENST00000497960 CXCL14O95715 111 aa16.89■□□□□ 0.29
NUP50-219ENST00000497960 AKAP5P24588 427 aa16.89■□□□□ 0.29
NUP50-219ENST00000497960 SSTR3P32745 418 aaPredicted RBP16.89■□□□□ 0.29
NUP50-219ENST00000497960 UBA7P41226 1012 aa16.89■□□□□ 0.29
NUP50-219ENST00000497960 PEX3P56589 373 aa16.89■□□□□ 0.29
NUP50-219ENST00000497960 CEBPZQ03701 1054 aaKnown RBP16.89■□□□□ 0.29
NUP50-219ENST00000497960 SF3A1Q15459 793 aaKnown RBP16.89■□□□□ 0.29
NUP50-219ENST00000497960 C1orf186Q6ZWK4 172 aa16.89■□□□□ 0.29
NUP50-219ENST00000497960 APBB1IPQ7Z5R6 666 aaPredicted RBP16.89■□□□□ 0.29
NUP50-219ENST00000497960 CABP7Q86V35 215 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms