RNA–Protein interactions for RNA: ENST00000496810.1

COL20A1-208, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 723 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-208ENST00000496810 AXLP30530 894 aa21.61■■□□□ 1.05
COL20A1-208ENST00000496810 KRT17Q04695 432 aa21.61■■□□□ 1.05
COL20A1-208ENST00000496810 COASYQ13057 564 aa21.61■■□□□ 1.05
COL20A1-208ENST00000496810 PCBP1Q15365 356 aaKnown RBP eCLIP21.61■■□□□ 1.05
COL20A1-208ENST00000496810 VPS52Q8N1B4 723 aa21.61■■□□□ 1.05
COL20A1-208ENST00000496810 URGCPQ8TCY9 931 aa21.61■■□□□ 1.05
COL20A1-208ENST00000496810 CCDC113Q9H0I3 377 aa21.61■■□□□ 1.05
COL20A1-208ENST00000496810 MARCH5Q9NX47 278 aa21.61■■□□□ 1.05
COL20A1-208ENST00000496810 MIOSQ9NXC5 875 aa21.61■■□□□ 1.05
COL20A1-208ENST00000496810 MUTP22033 750 aa21.6■■□□□ 1.05
COL20A1-208ENST00000496810 AKAP5P24588 427 aa21.6■■□□□ 1.05
COL20A1-208ENST00000496810 PRPHP41219 470 aa21.6■■□□□ 1.05
COL20A1-208ENST00000496810 SCNN1GP51170 649 aa21.6■■□□□ 1.05
COL20A1-208ENST00000496810 PDIA5Q14554 519 aa21.6■■□□□ 1.05
COL20A1-208ENST00000496810 RILPL1Q5EBL4 403 aa21.6■■□□□ 1.05
COL20A1-208ENST00000496810 PDE12Q6L8Q7 609 aaKnown RBP21.6■■□□□ 1.05
COL20A1-208ENST00000496810 PPP4R3CPQ6ZMV5 832 aa21.6■■□□□ 1.05
COL20A1-208ENST00000496810 RUSC1Q9BVN2 902 aa21.6■■□□□ 1.05
COL20A1-208ENST00000496810 APOL5Q9BWW9 433 aa21.6■■□□□ 1.05
COL20A1-208ENST00000496810 BACH2Q9BYV9 841 aa21.6■■□□□ 1.05
COL20A1-208ENST00000496810 FZD8Q9H461 694 aa21.6■■□□□ 1.05
COL20A1-208ENST00000496810 NGRNQ9NPE2 291 aaKnown RBP21.6■■□□□ 1.05
COL20A1-208ENST00000496810 USP15Q9Y4E8 981 aaPredicted RBP21.6■■□□□ 1.05
COL20A1-208ENST00000496810 A0A1B0GUA9 196 aa21.59■■□□□ 1.05
COL20A1-208ENST00000496810 LAD1O00515 517 aa21.59■■□□□ 1.05
COL20A1-208ENST00000496810 INPPL1O15357 1258 aa21.59■■□□□ 1.05
COL20A1-208ENST00000496810 LIG1P18858 919 aa21.59■■□□□ 1.05
COL20A1-208ENST00000496810 CUL4AQ13619 759 aa21.59■■□□□ 1.05
COL20A1-208ENST00000496810 SMC1AQ14683 1233 aaKnown RBP21.59■■□□□ 1.05
COL20A1-208ENST00000496810 DTHD1Q6ZMT9 781 aa21.59■■□□□ 1.05
COL20A1-208ENST00000496810 ADHFE1Q8IWW8 467 aa21.59■■□□□ 1.05
COL20A1-208ENST00000496810 DAW1Q8N136 415 aa21.59■■□□□ 1.05
COL20A1-208ENST00000496810 MRPL43Q8N983 215 aaKnown RBP21.59■■□□□ 1.05
COL20A1-208ENST00000496810 GSTCDQ8NEC7 633 aa21.59■■□□□ 1.05
COL20A1-208ENST00000496810 RSPH1Q8WYR4 309 aa21.59■■□□□ 1.05
COL20A1-208ENST00000496810 CXCL16Q9H2A7 254 aa21.59■■□□□ 1.05
COL20A1-208ENST00000496810 PDZD7Q9H5P4 517 aa21.59■■□□□ 1.05
COL20A1-208ENST00000496810 C11orf16Q9NQ32 467 aa21.59■■□□□ 1.05
COL20A1-208ENST00000496810 KLK14Q9P0G3 267 aa21.59■■□□□ 1.05
COL20A1-208ENST00000496810 CACNG4Q9UBN1 327 aa21.59■■□□□ 1.05
COL20A1-208ENST00000496810 RAPGEFL1Q9UHV5 662 aa21.59■■□□□ 1.05
COL20A1-208ENST00000496810 PRG3Q9Y2Y8 225 aaPredicted RBP21.59■■□□□ 1.05
COL20A1-208ENST00000496810 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.58■■□□□ 1.05
COL20A1-208ENST00000496810 FAM86C2PA6NEL3 165 aa21.58■■□□□ 1.05
COL20A1-208ENST00000496810 C19orf67A6NJJ6 358 aa21.58■■□□□ 1.05
COL20A1-208ENST00000496810 CA8P35219 290 aa21.58■■□□□ 1.05
COL20A1-208ENST00000496810 NAMPTP43490 491 aa21.58■■□□□ 1.05
COL20A1-208ENST00000496810 ZRSR1Q15695 479 aaKnown RBP21.58■■□□□ 1.05
COL20A1-208ENST00000496810 EEF1DP3Q658K8 133 aa21.58■■□□□ 1.05
COL20A1-208ENST00000496810 LARP1BQ659C4 914 aaKnown RBP21.58■■□□□ 1.05
COL20A1-208ENST00000496810 SLC27A1Q6PCB7 646 aa21.58■■□□□ 1.05
COL20A1-208ENST00000496810 SYCE2Q6PIF2 218 aa21.58■■□□□ 1.05
COL20A1-208ENST00000496810 DDX53Q86TM3 631 aaKnown RBP21.58■■□□□ 1.05
COL20A1-208ENST00000496810 ZBTB8OSQ8IWT0 167 aa21.58■■□□□ 1.05
COL20A1-208ENST00000496810 FEZF2Q8TBJ5 459 aa21.58■■□□□ 1.05
COL20A1-208ENST00000496810 PNMA5Q96PV4 448 aa21.58■■□□□ 1.05
COL20A1-208ENST00000496810 CDCA3Q99618 268 aaPredicted RBP21.58■■□□□ 1.05
COL20A1-208ENST00000496810 TRIM6Q9C030 488 aaPredicted RBP21.58■■□□□ 1.05
COL20A1-208ENST00000496810 PRMT7Q9NVM4 692 aaPredicted RBP21.58■■□□□ 1.05
COL20A1-208ENST00000496810 FAM50BQ9Y247 325 aa21.58■■□□□ 1.05
COL20A1-208ENST00000496810 HCFC2Q9Y5Z7 792 aa21.58■■□□□ 1.05
COL20A1-208ENST00000496810 C2orf16Q68DN1 1984 aa21.57■■□□□ 1.04
COL20A1-208ENST00000496810 VWA3AA6NCI4 1184 aa21.57■■□□□ 1.04
COL20A1-208ENST00000496810 NRP1O14786 923 aa21.57■■□□□ 1.04
COL20A1-208ENST00000496810 CLASP2O75122 1294 aaKnown RBP21.57■■□□□ 1.04
COL20A1-208ENST00000496810 PRKCBP05771 671 aa21.57■■□□□ 1.04
COL20A1-208ENST00000496810 DSC1Q08554 894 aa21.57■■□□□ 1.04
COL20A1-208ENST00000496810 MAPK7Q13164 816 aa21.57■■□□□ 1.04
COL20A1-208ENST00000496810 FAM187BQ17R55 369 aa21.57■■□□□ 1.04
COL20A1-208ENST00000496810 KRT79Q5XKE5 535 aa21.57■■□□□ 1.04
COL20A1-208ENST00000496810 COLGALT2Q8IYK4 626 aa21.57■■□□□ 1.04
COL20A1-208ENST00000496810 CNNM3Q8NE01 707 aa21.57■■□□□ 1.04
COL20A1-208ENST00000496810 PLIN2Q99541 437 aa21.57■■□□□ 1.04
COL20A1-208ENST00000496810 RAB34Q9BZG1 259 aa21.57■■□□□ 1.04
COL20A1-208ENST00000496810 PRKAG3Q9UGI9 489 aa21.57■■□□□ 1.04
COL20A1-208ENST00000496810 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.57■■□□□ 1.04
COL20A1-208ENST00000496810 MYH15Q9Y2K3 1946 aa21.57■■□□□ 1.04
COL20A1-208ENST00000496810 DENND4AQ7Z401 1863 aa21.56■■□□□ 1.04
COL20A1-208ENST00000496810 CXCL14O95715 111 aa21.56■■□□□ 1.04
COL20A1-208ENST00000496810 SSBP05455 408 aaKnown RBP eCLIP21.56■■□□□ 1.04
COL20A1-208ENST00000496810 CTSAP10619 480 aa21.56■■□□□ 1.04
COL20A1-208ENST00000496810 GRIN1Q05586 938 aa21.56■■□□□ 1.04
COL20A1-208ENST00000496810 NCBP1Q09161 790 aaKnown RBP21.56■■□□□ 1.04
COL20A1-208ENST00000496810 PTPN14Q15678 1187 aa21.56■■□□□ 1.04
COL20A1-208ENST00000496810 ANKRD54Q6NXT1 300 aa21.56■■□□□ 1.04
COL20A1-208ENST00000496810 TMEM184AQ6ZMB5 413 aa21.56■■□□□ 1.04
COL20A1-208ENST00000496810 DEPTORQ8TB45 409 aa21.56■■□□□ 1.04
COL20A1-208ENST00000496810 LRRC15Q8TF66 581 aa21.56■■□□□ 1.04
COL20A1-208ENST00000496810 RABGGTAQ92696 567 aa21.56■■□□□ 1.04
COL20A1-208ENST00000496810 PRIMPOLQ96LW4 560 aa21.56■■□□□ 1.04
COL20A1-208ENST00000496810 TMEM175Q9BSA9 504 aa21.56■■□□□ 1.04
COL20A1-208ENST00000496810 C2orf40Q9H1Z8 148 aa21.56■■□□□ 1.04
COL20A1-208ENST00000496810 WDFY4Q6ZS81 3184 aa21.55■■□□□ 1.04
COL20A1-208ENST00000496810 HIP1RO75146 1068 aa21.55■■□□□ 1.04
COL20A1-208ENST00000496810 PRPF4BQ13523 1007 aaKnown RBP21.55■■□□□ 1.04
COL20A1-208ENST00000496810 MAPK6Q16659 721 aa21.55■■□□□ 1.04
COL20A1-208ENST00000496810 SUSD6Q92537 303 aa21.55■■□□□ 1.04
COL20A1-208ENST00000496810 FAM193BQ96PV7 902 aaPredicted RBP21.55■■□□□ 1.04
COL20A1-208ENST00000496810 S1PR5Q9H228 398 aa21.55■■□□□ 1.04
COL20A1-208ENST00000496810 KANSL3Q9P2N6 904 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms