RNA–Protein interactions for RNA: ENST00000496785.5

CTDSP1-213, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-213ENST00000496785 TYW1Q9NV66 732 aaKnown RBP21.18■□□□□ 0.98
CTDSP1-213ENST00000496785 KANSL3Q9P2N6 904 aa21.18■□□□□ 0.98
CTDSP1-213ENST00000496785 IPPQ9Y573 584 aa21.18■□□□□ 0.98
CTDSP1-213ENST00000496785 ZMYM2Q9UBW7 1377 aa21.18■□□□□ 0.98
CTDSP1-213ENST00000496785 NLRC5Q86WI3 1866 aa21.18■□□□□ 0.98
CTDSP1-213ENST00000496785 SZT2Q5T011 3432 aa21.17■□□□□ 0.98
CTDSP1-213ENST00000496785 SLC16A4O15374 487 aa21.17■□□□□ 0.98
CTDSP1-213ENST00000496785 NPTXRO95502 500 aa21.17■□□□□ 0.98
CTDSP1-213ENST00000496785 LINC00271P0C7V0 271 aa21.17■□□□□ 0.98
CTDSP1-213ENST00000496785 PPM1AP35813 382 aa21.17■□□□□ 0.98
CTDSP1-213ENST00000496785 AMPD3Q01432 767 aa21.17■□□□□ 0.98
CTDSP1-213ENST00000496785 CACNB1Q02641 598 aaPredicted RBP21.17■□□□□ 0.98
CTDSP1-213ENST00000496785 ADGRE1Q14246 886 aa21.17■□□□□ 0.98
CTDSP1-213ENST00000496785 NOMO2Q5JPE7 1267 aa21.17■□□□□ 0.98
CTDSP1-213ENST00000496785 ATF7IP2Q5U623 682 aa21.17■□□□□ 0.98
CTDSP1-213ENST00000496785 SHC4Q6S5L8 630 aa21.17■□□□□ 0.98
CTDSP1-213ENST00000496785 MYCT1Q8N699 235 aa21.17■□□□□ 0.98
CTDSP1-213ENST00000496785 LEO1Q8WVC0 666 aaPredicted RBP21.17■□□□□ 0.98
CTDSP1-213ENST00000496785 LPPQ93052 612 aa21.17■□□□□ 0.98
CTDSP1-213ENST00000496785 EIF2AQ9BY44 585 aaKnown RBP21.17■□□□□ 0.98
CTDSP1-213ENST00000496785 TNMDQ9H2S6 317 aa21.17■□□□□ 0.98
CTDSP1-213ENST00000496785 ZHX3Q9H4I2 956 aa21.17■□□□□ 0.98
CTDSP1-213ENST00000496785 SEL1LQ9UBV2 794 aa21.17■□□□□ 0.98
CTDSP1-213ENST00000496785 GIT1Q9Y2X7 761 aa21.17■□□□□ 0.98
CTDSP1-213ENST00000496785 CHD9Q3L8U1 2897 aa21.16■□□□□ 0.98
CTDSP1-213ENST00000496785 NPHP3-ACAD11A0A0J9YXS1 232 aa21.16■□□□□ 0.98
CTDSP1-213ENST00000496785 RFXAPO00287 272 aa21.16■□□□□ 0.98
CTDSP1-213ENST00000496785 NCKAP1LP55160 1127 aa21.16■□□□□ 0.98
CTDSP1-213ENST00000496785 RNASELQ05823 741 aaKnown RBP21.16■□□□□ 0.98
CTDSP1-213ENST00000496785 AGMOQ6ZNB7 445 aa21.16■□□□□ 0.98
CTDSP1-213ENST00000496785 SMG8Q8ND04 991 aaKnown RBP21.16■□□□□ 0.98
CTDSP1-213ENST00000496785 DDX12PQ92771 950 aa21.16■□□□□ 0.98
CTDSP1-213ENST00000496785 KCNN1Q92952 543 aa21.16■□□□□ 0.98
CTDSP1-213ENST00000496785 PANK2Q9BZ23 570 aa21.16■□□□□ 0.98
CTDSP1-213ENST00000496785 PDZD7Q9H5P4 517 aa21.16■□□□□ 0.98
CTDSP1-213ENST00000496785 TNFSF13BQ9Y275 285 aa21.16■□□□□ 0.98
CTDSP1-213ENST00000496785 MYH11P35749 1972 aa21.16■□□□□ 0.98
CTDSP1-213ENST00000496785 COL4A4P53420 1690 aaPredicted RBP21.15■□□□□ 0.98
CTDSP1-213ENST00000496785 MYO9BQ13459 2157 aa21.15■□□□□ 0.98
CTDSP1-213ENST00000496785 TRAK2O60296 914 aa21.15■□□□□ 0.98
CTDSP1-213ENST00000496785 OFD1O75665 1012 aa21.15■□□□□ 0.98
CTDSP1-213ENST00000496785 GAP43P17677 238 aa21.15■□□□□ 0.98
CTDSP1-213ENST00000496785 RESP18Q5W5W9 173 aa21.15■□□□□ 0.98
CTDSP1-213ENST00000496785 FAM178BQ8IXR5 827 aa21.15■□□□□ 0.98
CTDSP1-213ENST00000496785 COLGALT1Q8NBJ5 622 aa21.15■□□□□ 0.98
CTDSP1-213ENST00000496785 TMEM161BQ8NDZ6 487 aa21.15■□□□□ 0.98
CTDSP1-213ENST00000496785 MRPL38Q96DV4 380 aaKnown RBP21.15■□□□□ 0.98
CTDSP1-213ENST00000496785 ZNF558Q96NG5 402 aa21.15■□□□□ 0.98
CTDSP1-213ENST00000496785 CWH43Q9H720 699 aa21.15■□□□□ 0.98
CTDSP1-213ENST00000496785 CIZ1Q9ULV3 898 aaPredicted RBP21.15■□□□□ 0.98
CTDSP1-213ENST00000496785 INPP5FQ9Y2H2 1132 aa21.15■□□□□ 0.98
CTDSP1-213ENST00000496785 MTCH2Q9Y6C9 303 aa21.15■□□□□ 0.98
CTDSP1-213ENST00000496785 A0A087X0B3 334 aa21.14■□□□□ 0.97
CTDSP1-213ENST00000496785 K7ENM7 598 aa21.14■□□□□ 0.97
CTDSP1-213ENST00000496785 LPXNO60711 386 aa21.14■□□□□ 0.97
CTDSP1-213ENST00000496785 MAPTP10636 758 aaKnown RBP21.14■□□□□ 0.97
CTDSP1-213ENST00000496785 UBE3AQ05086 875 aa21.14■□□□□ 0.97
CTDSP1-213ENST00000496785 LONRF3Q496Y0 759 aa21.14■□□□□ 0.97
CTDSP1-213ENST00000496785 TIGD5Q53EQ6 642 aa21.14■□□□□ 0.97
CTDSP1-213ENST00000496785 ADALQ6DHV7 355 aa21.14■□□□□ 0.97
CTDSP1-213ENST00000496785 DYMQ7RTS9 669 aa21.14■□□□□ 0.97
CTDSP1-213ENST00000496785 HAUS6Q7Z4H7 955 aa21.14■□□□□ 0.97
CTDSP1-213ENST00000496785 CDR2LQ86X02 465 aaPredicted RBP21.14■□□□□ 0.97
CTDSP1-213ENST00000496785 THNSL1Q8IYQ7 743 aa21.14■□□□□ 0.97
CTDSP1-213ENST00000496785 DHX58Q96C10 678 aa21.14■□□□□ 0.97
CTDSP1-213ENST00000496785 FAM193BQ96PV7 902 aaPredicted RBP21.14■□□□□ 0.97
CTDSP1-213ENST00000496785 NXF3Q9H4D5 531 aaKnown RBP21.14■□□□□ 0.97
CTDSP1-213ENST00000496785 MYMKA6NI61 221 aa21.13■□□□□ 0.97
CTDSP1-213ENST00000496785 INPPL1O15357 1258 aa21.13■□□□□ 0.97
CTDSP1-213ENST00000496785 ALDH7A1P49419 539 aaKnown RBP21.13■□□□□ 0.97
CTDSP1-213ENST00000496785 E2F4Q16254 413 aa21.13■□□□□ 0.97
CTDSP1-213ENST00000496785 NT5DC1Q5TFE4 455 aa21.13■□□□□ 0.97
CTDSP1-213ENST00000496785 KCNT2Q6UVM3 1135 aa21.13■□□□□ 0.97
CTDSP1-213ENST00000496785 ZPBP2Q6X784 338 aa21.13■□□□□ 0.97
CTDSP1-213ENST00000496785 RPS6KC1Q96S38 1066 aa21.13■□□□□ 0.97
CTDSP1-213ENST00000496785 ACO2Q99798 780 aaKnown RBP21.13■□□□□ 0.97
CTDSP1-213ENST00000496785 APOL6Q9BWW8 343 aa21.13■□□□□ 0.97
CTDSP1-213ENST00000496785 TBC1D13Q9NVG8 400 aa21.13■□□□□ 0.97
CTDSP1-213ENST00000496785 PARP2Q9UGN5 583 aa21.13■□□□□ 0.97
CTDSP1-213ENST00000496785 MEIS3P2A8K0S8 358 aa21.12■□□□□ 0.97
CTDSP1-213ENST00000496785 POLR2DO15514 142 aaKnown RBP21.12■□□□□ 0.97
CTDSP1-213ENST00000496785 IDEP14735 1019 aa21.12■□□□□ 0.97
CTDSP1-213ENST00000496785 CMA1P23946 247 aa21.12■□□□□ 0.97
CTDSP1-213ENST00000496785 ZNF568Q3ZCX4 644 aa21.12■□□□□ 0.97
CTDSP1-213ENST00000496785 LRRC55Q6ZSA7 311 aa21.12■□□□□ 0.97
CTDSP1-213ENST00000496785 TAS1R3Q7RTX0 852 aa21.12■□□□□ 0.97
CTDSP1-213ENST00000496785 CCDC65Q8IXS2 484 aa21.12■□□□□ 0.97
CTDSP1-213ENST00000496785 CEP57L1Q8IYX8 460 aa21.12■□□□□ 0.97
CTDSP1-213ENST00000496785 MICALL1Q8N3F8 863 aa21.12■□□□□ 0.97
CTDSP1-213ENST00000496785 KLHL23Q8NBE8 558 aa21.12■□□□□ 0.97
CTDSP1-213ENST00000496785 HVCN1Q96D96 273 aa21.12■□□□□ 0.97
CTDSP1-213ENST00000496785 BICD1Q96G01 975 aa21.12■□□□□ 0.97
CTDSP1-213ENST00000496785 TCHPQ9BT92 498 aa21.12■□□□□ 0.97
CTDSP1-213ENST00000496785 TARS2Q9BW92 718 aaKnown RBP21.12■□□□□ 0.97
CTDSP1-213ENST00000496785 ST6GALNAC4Q9H4F1 302 aa21.12■□□□□ 0.97
CTDSP1-213ENST00000496785 KBTBD4Q9NVX7 518 aa21.12■□□□□ 0.97
CTDSP1-213ENST00000496785 SPG21Q9NZD8 308 aa21.12■□□□□ 0.97
CTDSP1-213ENST00000496785 PUF60Q9UHX1 559 aaKnown RBP21.12■□□□□ 0.97
CTDSP1-213ENST00000496785 KCNH3Q9ULD8 1083 aa21.12■□□□□ 0.97
CTDSP1-213ENST00000496785 PLAGL2Q9UPG8 496 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms