RNA–Protein interactions for RNA: ENST00000494891.5

NEPRO-222, Transcript of nucleolus and neural progenitor protein, human

TSL 4

Gene NEPRO, Length 547 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEPRO-222	ENST00000494891	ARL5C	A6NH57	179 aa		11.36	□□□□□ -0.59
NEPRO-222	ENST00000494891	LRRIQ4	A6NIV6	560 aa		11.36	□□□□□ -0.59
NEPRO-222	ENST00000494891	C19orf67	A6NJJ6	358 aa		11.36	□□□□□ -0.59
NEPRO-222	ENST00000494891		H3BQ06	376 aa	Predicted RBP	11.36	□□□□□ -0.59
NEPRO-222	ENST00000494891	N4BP3	O15049	544 aa		11.36	□□□□□ -0.59
NEPRO-222	ENST00000494891	MBTPS2	O43462	519 aa		11.36	□□□□□ -0.59
NEPRO-222	ENST00000494891	CTSA	P10619	480 aa		11.36	□□□□□ -0.59
NEPRO-222	ENST00000494891	GTF2F1	P35269	517 aa	Known RBP eCLIP	11.36	□□□□□ -0.59
NEPRO-222	ENST00000494891	NRIP1	P48552	1158 aa		11.36	□□□□□ -0.59
NEPRO-222	ENST00000494891	SMAD4	Q13485	552 aa	Known RBP	11.36	□□□□□ -0.59
NEPRO-222	ENST00000494891	SMC1A	Q14683	1233 aa	Known RBP	11.36	□□□□□ -0.59
NEPRO-222	ENST00000494891	BMS1	Q14692	1282 aa	Known RBP	11.36	□□□□□ -0.59
NEPRO-222	ENST00000494891	MAPK6	Q16659	721 aa		11.36	□□□□□ -0.59
NEPRO-222	ENST00000494891	C1orf186	Q6ZWK4	172 aa		11.36	□□□□□ -0.59
NEPRO-222	ENST00000494891	GPR65	Q8IYL9	337 aa		11.36	□□□□□ -0.59
NEPRO-222	ENST00000494891	RNF168	Q8IYW5	571 aa	Predicted RBP	11.36	□□□□□ -0.59
NEPRO-222	ENST00000494891	GSTCD	Q8NEC7	633 aa		11.36	□□□□□ -0.59
NEPRO-222	ENST00000494891	SNX21	Q969T3	373 aa		11.36	□□□□□ -0.59
NEPRO-222	ENST00000494891	IFT74	Q96LB3	600 aa		11.36	□□□□□ -0.59
NEPRO-222	ENST00000494891	TCF25	Q9BQ70	676 aa		11.36	□□□□□ -0.59
NEPRO-222	ENST00000494891	ZBP1	Q9H171	429 aa		11.36	□□□□□ -0.59
NEPRO-222	ENST00000494891	CD207	Q9UJ71	328 aa		11.36	□□□□□ -0.59
NEPRO-222	ENST00000494891	C2orf71	A6NGG8	1288 aa		11.35	□□□□□ -0.59
NEPRO-222	ENST00000494891	PP2D1	A8MPX8	630 aa		11.35	□□□□□ -0.59
NEPRO-222	ENST00000494891		E9PMD0	336 aa		11.35	□□□□□ -0.59
NEPRO-222	ENST00000494891	LINC01565	O15544	149 aa		11.35	□□□□□ -0.59
NEPRO-222	ENST00000494891	B4GALT5	O43286	388 aa		11.35	□□□□□ -0.59
NEPRO-222	ENST00000494891	B4GALT3	O60512	393 aa		11.35	□□□□□ -0.59
NEPRO-222	ENST00000494891	ZC3H11A	O75152	810 aa	Known RBP eCLIP	11.35	□□□□□ -0.59
NEPRO-222	ENST00000494891	DDHD2	O94830	711 aa		11.35	□□□□□ -0.59
NEPRO-222	ENST00000494891	C1R	P00736	705 aa		11.35	□□□□□ -0.59
NEPRO-222	ENST00000494891	ALDH2	P05091	517 aa		11.35	□□□□□ -0.59
NEPRO-222	ENST00000494891	SRGAP2B	P0DMP2	458 aa		11.35	□□□□□ -0.59
NEPRO-222	ENST00000494891	PDIA4	P13667	645 aa	Known RBP	11.35	□□□□□ -0.59
NEPRO-222	ENST00000494891	IL9	P15248	144 aa		11.35	□□□□□ -0.59
NEPRO-222	ENST00000494891	HOXB8	P17481	243 aa	Predicted RBP	11.35	□□□□□ -0.59
NEPRO-222	ENST00000494891	SCP2	P22307	547 aa		11.35	□□□□□ -0.59
NEPRO-222	ENST00000494891	PBX3	P40426	434 aa		11.35	□□□□□ -0.59
NEPRO-222	ENST00000494891	SLC11A1	P49279	550 aa		11.35	□□□□□ -0.59
NEPRO-222	ENST00000494891	AFF1	P51825	1210 aa	Known RBP	11.35	□□□□□ -0.59
NEPRO-222	ENST00000494891	RNASEL	Q05823	741 aa	Known RBP	11.35	□□□□□ -0.59
NEPRO-222	ENST00000494891	MAPK7	Q13164	816 aa		11.35	□□□□□ -0.59
NEPRO-222	ENST00000494891	TMEM119	Q4V9L6	283 aa		11.35	□□□□□ -0.59
NEPRO-222	ENST00000494891	RINT1	Q6NUQ1	792 aa		11.35	□□□□□ -0.59
NEPRO-222	ENST00000494891	TMC7	Q7Z402	723 aa		11.35	□□□□□ -0.59
NEPRO-222	ENST00000494891	KCNK18	Q7Z418	384 aa		11.35	□□□□□ -0.59
NEPRO-222	ENST00000494891	TMEM173	Q86WV6	379 aa	Predicted RBP	11.35	□□□□□ -0.59
NEPRO-222	ENST00000494891	ZNF280B	Q86YH2	543 aa		11.35	□□□□□ -0.59
NEPRO-222	ENST00000494891	ADHFE1	Q8IWW8	467 aa		11.35	□□□□□ -0.59
NEPRO-222	ENST00000494891	COLGALT2	Q8IYK4	626 aa		11.35	□□□□□ -0.59
NEPRO-222	ENST00000494891	DAW1	Q8N136	415 aa		11.35	□□□□□ -0.59
NEPRO-222	ENST00000494891	SYT2	Q8N9I0	419 aa	Predicted RBP	11.35	□□□□□ -0.59
NEPRO-222	ENST00000494891	DEPTOR	Q8TB45	409 aa		11.35	□□□□□ -0.59
NEPRO-222	ENST00000494891	MICAL1	Q8TDZ2	1067 aa		11.35	□□□□□ -0.59
NEPRO-222	ENST00000494891	CPB2	Q96IY4	423 aa		11.35	□□□□□ -0.59
NEPRO-222	ENST00000494891	DRC1	Q96MC2	740 aa		11.35	□□□□□ -0.59
NEPRO-222	ENST00000494891	PNMA5	Q96PV4	448 aa		11.35	□□□□□ -0.59
NEPRO-222	ENST00000494891	TRIM6	Q9C030	488 aa	Predicted RBP	11.35	□□□□□ -0.59
NEPRO-222	ENST00000494891	RNF39	Q9H2S5	420 aa		11.35	□□□□□ -0.59
NEPRO-222	ENST00000494891	TMEM134	Q9H6X4	195 aa		11.35	□□□□□ -0.59
NEPRO-222	ENST00000494891	ENTPD7	Q9NQZ7	604 aa		11.35	□□□□□ -0.59
NEPRO-222	ENST00000494891	ARHGAP28	Q9P2N2	729 aa		11.35	□□□□□ -0.59
NEPRO-222	ENST00000494891	DNAJB4	Q9UDY4	337 aa		11.35	□□□□□ -0.59
NEPRO-222	ENST00000494891	RBM19	Q9Y4C8	960 aa	Known RBP	11.35	□□□□□ -0.59
NEPRO-222	ENST00000494891	PCDHGC5	Q9Y5F6	944 aa		11.35	□□□□□ -0.59
NEPRO-222	ENST00000494891	TDRD15	B5MCY1	1934 aa	Known RBP	11.35	□□□□□ -0.59
NEPRO-222	ENST00000494891	VWA3A	A6NCI4	1184 aa		11.34	□□□□□ -0.59
NEPRO-222	ENST00000494891	HIDE1	A8MVS5	230 aa		11.34	□□□□□ -0.59
NEPRO-222	ENST00000494891		K7ELQ4	463 aa	Predicted RBP	11.34	□□□□□ -0.59
NEPRO-222	ENST00000494891	LILRB3	O75022	631 aa		11.34	□□□□□ -0.59
NEPRO-222	ENST00000494891	PRKCB	P05771	671 aa		11.34	□□□□□ -0.59
NEPRO-222	ENST00000494891	SYT1	P21579	422 aa		11.34	□□□□□ -0.59
NEPRO-222	ENST00000494891	CDC25A	P30304	524 aa		11.34	□□□□□ -0.59
NEPRO-222	ENST00000494891	LONP1	P36776	959 aa	Known RBP	11.34	□□□□□ -0.59
NEPRO-222	ENST00000494891	NPTX2	P47972	431 aa		11.34	□□□□□ -0.59
NEPRO-222	ENST00000494891	NDUFV1	P49821	464 aa		11.34	□□□□□ -0.59
NEPRO-222	ENST00000494891	SLC12A3	P55017	1021 aa		11.34	□□□□□ -0.59
NEPRO-222	ENST00000494891	ZP2	Q05996	745 aa		11.34	□□□□□ -0.59
NEPRO-222	ENST00000494891	PRPF4B	Q13523	1007 aa	Known RBP	11.34	□□□□□ -0.59
NEPRO-222	ENST00000494891	DCAF4L1	Q3SXM0	396 aa		11.34	□□□□□ -0.59
NEPRO-222	ENST00000494891	MAEA	Q7L5Y9	396 aa		11.34	□□□□□ -0.59
NEPRO-222	ENST00000494891	GJD3	Q8N144	294 aa		11.34	□□□□□ -0.59
NEPRO-222	ENST00000494891	VN1R2	Q8NFZ6	395 aa		11.34	□□□□□ -0.59
NEPRO-222	ENST00000494891	BCL7C	Q8WUZ0	217 aa	Predicted RBP	11.34	□□□□□ -0.59
NEPRO-222	ENST00000494891	SPIRE2	Q8WWL2	714 aa		11.34	□□□□□ -0.59
NEPRO-222	ENST00000494891	SUSD6	Q92537	303 aa		11.34	□□□□□ -0.59
NEPRO-222	ENST00000494891	NECAB3	Q96P71	396 aa	Predicted RBP	11.34	□□□□□ -0.59
NEPRO-222	ENST00000494891	POP1	Q99575	1024 aa	Known RBP	11.34	□□□□□ -0.59
NEPRO-222	ENST00000494891	VN1R3	Q9BXE9	311 aa		11.34	□□□□□ -0.59
NEPRO-222	ENST00000494891	NXF3	Q9H4D5	531 aa	Known RBP	11.34	□□□□□ -0.59
NEPRO-222	ENST00000494891	PDZD7	Q9H5P4	517 aa		11.34	□□□□□ -0.59
NEPRO-222	ENST00000494891	IGFLR1	Q9H665	355 aa		11.34	□□□□□ -0.59
NEPRO-222	ENST00000494891	TNFSF13B	Q9Y275	285 aa		11.34	□□□□□ -0.59
NEPRO-222	ENST00000494891	INPP5F	Q9Y2H2	1132 aa		11.34	□□□□□ -0.59
NEPRO-222	ENST00000494891	FAN1	Q9Y2M0	1017 aa		11.34	□□□□□ -0.59
NEPRO-222	ENST00000494891	TTLL13P	A6NNM8	815 aa		11.33	□□□□□ -0.6
NEPRO-222	ENST00000494891	NT5C1B-RDH14	C9J2C7	533 aa		11.33	□□□□□ -0.6
NEPRO-222	ENST00000494891	PI4K2B	G5E9Z4	385 aa		11.33	□□□□□ -0.6
NEPRO-222	ENST00000494891		K7ERI5	159 aa		11.33	□□□□□ -0.6
NEPRO-222	ENST00000494891	NRP1	O14786	923 aa		11.33	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms