RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 HECAQ9UBI9 543 aaPredicted RBP5.9□□□□□ -1.46
ITGB1-216ENST00000493758 GIT1Q9Y2X7 761 aa5.9□□□□□ -1.46
ITGB1-216ENST00000493758 RPTORQ8N122 1335 aa5.9□□□□□ -1.47
ITGB1-216ENST00000493758 CAPN14A8MX76 684 aa5.89□□□□□ -1.47
ITGB1-216ENST00000493758 MATN3O15232 486 aa5.89□□□□□ -1.47
ITGB1-216ENST00000493758 PRAMEF4O60810 478 aa5.89□□□□□ -1.47
ITGB1-216ENST00000493758 AGXTP21549 392 aa5.89□□□□□ -1.47
ITGB1-216ENST00000493758 GZMKP49863 264 aa5.89□□□□□ -1.47
ITGB1-216ENST00000493758 RABGGTBP53611 331 aa5.89□□□□□ -1.47
ITGB1-216ENST00000493758 SRSF2Q01130 221 aaKnown RBP5.89□□□□□ -1.47
ITGB1-216ENST00000493758 MGAT2Q10469 447 aa5.89□□□□□ -1.47
ITGB1-216ENST00000493758 ZXDCQ2QGD7 858 aaPredicted RBP5.89□□□□□ -1.47
ITGB1-216ENST00000493758 TGFBRAP1Q8WUH2 860 aa5.89□□□□□ -1.47
ITGB1-216ENST00000493758 TMEM176AQ96HP8 235 aa5.89□□□□□ -1.47
ITGB1-216ENST00000493758 ACE2Q9BYF1 805 aaPredicted RBP5.89□□□□□ -1.47
ITGB1-216ENST00000493758 GREM2Q9H772 168 aa5.89□□□□□ -1.47
ITGB1-216ENST00000493758 DNAJC28Q9NX36 388 aa5.89□□□□□ -1.47
ITGB1-216ENST00000493758 GPRC5DQ9NZD1 345 aa5.89□□□□□ -1.47
ITGB1-216ENST00000493758 TRPS1Q9UHF7 1281 aa5.89□□□□□ -1.47
ITGB1-216ENST00000493758 EDARQ9UNE0 448 aa5.89□□□□□ -1.47
ITGB1-216ENST00000493758 GPR45Q9Y5Y3 372 aa5.89□□□□□ -1.47
ITGB1-216ENST00000493758 HOXA3O43365 443 aaPredicted RBP5.88□□□□□ -1.47
ITGB1-216ENST00000493758 CFBP00751 764 aa5.88□□□□□ -1.47
ITGB1-216ENST00000493758 RBP3P10745 1247 aa5.88□□□□□ -1.47
ITGB1-216ENST00000493758 WASP42768 502 aa5.88□□□□□ -1.47
ITGB1-216ENST00000493758 MTMR1Q13613 665 aa5.88□□□□□ -1.47
ITGB1-216ENST00000493758 ELAVL1Q15717 326 aaKnown RBP5.88□□□□□ -1.47
ITGB1-216ENST00000493758 PTPROQ16827 1216 aa5.88□□□□□ -1.47
ITGB1-216ENST00000493758 MUM1L1Q5H9M0 696 aa5.88□□□□□ -1.47
ITGB1-216ENST00000493758 C1QL3Q5VWW1 255 aa5.88□□□□□ -1.47
ITGB1-216ENST00000493758 ABHD15Q6UXT9 468 aa5.88□□□□□ -1.47
ITGB1-216ENST00000493758 PALM2Q8IXS6 379 aa5.88□□□□□ -1.47
ITGB1-216ENST00000493758 THEMISQ8N1K5 641 aaPredicted RBP5.88□□□□□ -1.47
ITGB1-216ENST00000493758 BCO1Q9HAY6 547 aa5.88□□□□□ -1.47
ITGB1-216ENST00000493758 RBM12Q9NTZ6 932 aaKnown RBP5.88□□□□□ -1.47
ITGB1-216ENST00000493758 KLRG2A4D1S0 409 aaPredicted RBP5.87□□□□□ -1.47
ITGB1-216ENST00000493758 B5MCH6 92 aa5.87□□□□□ -1.47
ITGB1-216ENST00000493758 FZD9O00144 591 aa5.87□□□□□ -1.47
ITGB1-216ENST00000493758 ITGA10O75578 1167 aa5.87□□□□□ -1.47
ITGB1-216ENST00000493758 GNAT2P19087 354 aa5.87□□□□□ -1.47
ITGB1-216ENST00000493758 CASRP41180 1078 aa5.87□□□□□ -1.47
ITGB1-216ENST00000493758 MCAMP43121 646 aa5.87□□□□□ -1.47
ITGB1-216ENST00000493758 GUCY2FP51841 1108 aa5.87□□□□□ -1.47
ITGB1-216ENST00000493758 PPP3CAQ08209 521 aa5.87□□□□□ -1.47
ITGB1-216ENST00000493758 TOR2AQ5JU69 321 aa5.87□□□□□ -1.47
ITGB1-216ENST00000493758 MIIPQ5JXC2 388 aa5.87□□□□□ -1.47
ITGB1-216ENST00000493758 FAM180AQ6UWF9 173 aa5.87□□□□□ -1.47
ITGB1-216ENST00000493758 GPRIN1Q7Z2K8 1008 aa5.87□□□□□ -1.47
ITGB1-216ENST00000493758 SGMS1Q86VZ5 419 aa5.87□□□□□ -1.47
ITGB1-216ENST00000493758 AMOTL1Q8IY63 956 aa5.87□□□□□ -1.47
ITGB1-216ENST00000493758 FAM177A1Q8N128 213 aaPredicted RBP5.87□□□□□ -1.47
ITGB1-216ENST00000493758 C1orf162Q8NEQ5 155 aaPredicted RBP5.87□□□□□ -1.47
ITGB1-216ENST00000493758 GPR156Q8NFN8 814 aa5.87□□□□□ -1.47
ITGB1-216ENST00000493758 OR52N2Q8NGI0 321 aa5.87□□□□□ -1.47
ITGB1-216ENST00000493758 ST8SIA2Q92186 375 aa5.87□□□□□ -1.47
ITGB1-216ENST00000493758 ARL8AQ96BM9 186 aa5.87□□□□□ -1.47
ITGB1-216ENST00000493758 SLC13A1Q9BZW2 595 aa5.87□□□□□ -1.47
ITGB1-216ENST00000493758 TYW1Q9NV66 732 aaKnown RBP5.87□□□□□ -1.47
ITGB1-216ENST00000493758 GABRDO14764 452 aa5.86□□□□□ -1.47
ITGB1-216ENST00000493758 PEX11BO96011 259 aa5.86□□□□□ -1.47
ITGB1-216ENST00000493758 HIBADHP31937 336 aaKnown RBP5.86□□□□□ -1.47
ITGB1-216ENST00000493758 MAN2A2P49641 1150 aa5.86□□□□□ -1.47
ITGB1-216ENST00000493758 DRICH1Q6PGQ1 229 aaPredicted RBP5.86□□□□□ -1.47
ITGB1-216ENST00000493758 CRIP3Q6Q6R5 217 aa5.86□□□□□ -1.47
ITGB1-216ENST00000493758 PDZD4Q76G19 769 aaPredicted RBP5.86□□□□□ -1.47
ITGB1-216ENST00000493758 TMPRSS6Q8IU80 811 aa5.86□□□□□ -1.47
ITGB1-216ENST00000493758 OR7D4Q8NG98 312 aa5.86□□□□□ -1.47
ITGB1-216ENST00000493758 IL17DQ8TAD2 202 aa5.86□□□□□ -1.47
ITGB1-216ENST00000493758 SH3RF3Q8TEJ3 882 aaPredicted RBP5.86□□□□□ -1.47
ITGB1-216ENST00000493758 CACTINQ8WUQ7 758 aaKnown RBP5.86□□□□□ -1.47
ITGB1-216ENST00000493758 GPATCH3Q96I76 525 aa5.86□□□□□ -1.47
ITGB1-216ENST00000493758 TRHDEQ9UKU6 1024 aa5.86□□□□□ -1.47
ITGB1-216ENST00000493758 CLCA2Q9UQC9 943 aa5.86□□□□□ -1.47
ITGB1-216ENST00000493758 NOP58Q9Y2X3 529 aaKnown RBP5.86□□□□□ -1.47
ITGB1-216ENST00000493758 ANKRD62A6NC57 917 aa5.85□□□□□ -1.47
ITGB1-216ENST00000493758 FAM171A2A8MVW0 826 aa5.85□□□□□ -1.47
ITGB1-216ENST00000493758 GOLGA6L6A8MZA4 724 aa5.85□□□□□ -1.47
ITGB1-216ENST00000493758 MFAP3LO75121 409 aa5.85□□□□□ -1.47
ITGB1-216ENST00000493758 STC2O76061 302 aa5.85□□□□□ -1.47
ITGB1-216ENST00000493758 ENDOD1O94919 500 aa5.85□□□□□ -1.47
ITGB1-216ENST00000493758 ECHS1P30084 290 aa5.85□□□□□ -1.47
ITGB1-216ENST00000493758 IARSP41252 1262 aaKnown RBP5.85□□□□□ -1.47
ITGB1-216ENST00000493758 FLT3LGP49771 235 aa5.85□□□□□ -1.47
ITGB1-216ENST00000493758 CDK17Q00537 523 aa5.85□□□□□ -1.47
ITGB1-216ENST00000493758 Q6ZVL8 140 aa5.85□□□□□ -1.47
ITGB1-216ENST00000493758 ZNF572Q7Z3I7 529 aaPredicted RBP5.85□□□□□ -1.47
ITGB1-216ENST00000493758 GGNQ86UU5 652 aa5.85□□□□□ -1.47
ITGB1-216ENST00000493758 OR5M3Q8NGP4 307 aa5.85□□□□□ -1.47
ITGB1-216ENST00000493758 RIN2Q8WYP3 895 aaPredicted RBP5.85□□□□□ -1.47
ITGB1-216ENST00000493758 ZNF503Q96F45 646 aa5.85□□□□□ -1.47
ITGB1-216ENST00000493758 CDC5LQ99459 802 aaKnown RBP5.85□□□□□ -1.47
ITGB1-216ENST00000493758 LSM14BQ9BX40 385 aaKnown RBP5.85□□□□□ -1.47
ITGB1-216ENST00000493758 CEP72Q9P209 647 aa5.85□□□□□ -1.47
ITGB1-216ENST00000493758 NCDNQ9UBB6 729 aa5.85□□□□□ -1.47
ITGB1-216ENST00000493758 SPEF1Q9Y4P9 236 aa5.85□□□□□ -1.47
ITGB1-216ENST00000493758 SHTN1A0MZ66 631 aa5.84□□□□□ -1.47
ITGB1-216ENST00000493758 GRXCR1A8MXD5 290 aa5.84□□□□□ -1.47
ITGB1-216ENST00000493758 PJA2O43164 708 aa5.84□□□□□ -1.47
ITGB1-216ENST00000493758 INSRRP14616 1297 aa5.84□□□□□ -1.47
ITGB1-216ENST00000493758 GUCY1A2P33402 732 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms