RNA–Protein interactions for RNA: ENST00000493669.2

PHACTR4-204, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 3,078 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-204ENST00000493669 MAP2K7O14733 419 aa11.69□□□□□ -0.54
PHACTR4-204ENST00000493669 ZC3H11AO75152 810 aaKnown RBP eCLIP11.69□□□□□ -0.54
PHACTR4-204ENST00000493669 YBX3P16989 372 aaKnown RBP eCLIP11.69□□□□□ -0.544e-7■□□□□ 9.7
PHACTR4-204ENST00000493669 TNFAIP3P21580 790 aa11.69□□□□□ -0.54
PHACTR4-204ENST00000493669 ARL2P36404 184 aa11.69□□□□□ -0.54
PHACTR4-204ENST00000493669 STRN3Q13033 797 aa11.69□□□□□ -0.54
PHACTR4-204ENST00000493669 MOGSQ13724 837 aa11.69□□□□□ -0.54
PHACTR4-204ENST00000493669 TARBP2Q15633 366 aaKnown RBP11.69□□□□□ -0.54
PHACTR4-204ENST00000493669 HDXQ7Z353 690 aa11.69□□□□□ -0.54
PHACTR4-204ENST00000493669 LRRC57Q8N9N7 239 aa11.69□□□□□ -0.54
PHACTR4-204ENST00000493669 SHCBP1Q8NEM2 672 aa11.69□□□□□ -0.54
PHACTR4-204ENST00000493669 SEPT1Q8WYJ6 367 aa11.69□□□□□ -0.54
PHACTR4-204ENST00000493669 CEP89Q96ST8 783 aa11.69□□□□□ -0.54
PHACTR4-204ENST00000493669 PAGR1Q9BTK6 254 aa11.69□□□□□ -0.54
PHACTR4-204ENST00000493669 MROH8Q9H579 483 aa11.69□□□□□ -0.54
PHACTR4-204ENST00000493669 TELO2Q9Y4R8 837 aa11.69□□□□□ -0.54
PHACTR4-204ENST00000493669 LRRIQ3A6PVS8 624 aaPredicted RBP11.68□□□□□ -0.54
PHACTR4-204ENST00000493669 GAS2O43903 313 aaKnown RBP11.68□□□□□ -0.54
PHACTR4-204ENST00000493669 MFAP3P55082 362 aa11.68□□□□□ -0.54
PHACTR4-204ENST00000493669 FSTL1Q12841 308 aa11.68□□□□□ -0.54
PHACTR4-204ENST00000493669 TTLL12Q14166 644 aaPredicted RBP11.68□□□□□ -0.54
PHACTR4-204ENST00000493669 GLE1Q53GS7 698 aaKnown RBP11.68□□□□□ -0.54
PHACTR4-204ENST00000493669 SLFN12LQ6IEE8 588 aa11.68□□□□□ -0.54
PHACTR4-204ENST00000493669 TAS1R3Q7RTX0 852 aa11.68□□□□□ -0.54
PHACTR4-204ENST00000493669 SLFN11Q7Z7L1 901 aa11.68□□□□□ -0.54
PHACTR4-204ENST00000493669 TPCN2Q8NHX9 752 aa11.68□□□□□ -0.54
PHACTR4-204ENST00000493669 TAF4BQ92750 862 aa11.68□□□□□ -0.54
PHACTR4-204ENST00000493669 BICD1Q96G01 975 aa11.68□□□□□ -0.54
PHACTR4-204ENST00000493669 AGPAT1Q99943 283 aa11.68□□□□□ -0.54
PHACTR4-204ENST00000493669 DNAJC25-GNG10A0A024R161 153 aa11.68□□□□□ -0.54
PHACTR4-204ENST00000493669 GOLGA8IPA6NC78 632 aa11.68□□□□□ -0.54
PHACTR4-204ENST00000493669 GOLGA8JA6NMD2 632 aa11.68□□□□□ -0.54
PHACTR4-204ENST00000493669 FOXN3O00409 490 aaPredicted RBP11.68□□□□□ -0.54
PHACTR4-204ENST00000493669 NCK2O43639 380 aa11.68□□□□□ -0.54
PHACTR4-204ENST00000493669 EXTL3O43909 919 aa11.68□□□□□ -0.54
PHACTR4-204ENST00000493669 GABPB1Q06547 395 aaPredicted RBP11.68□□□□□ -0.54
PHACTR4-204ENST00000493669 TCEAL1Q15170 157 aa11.68□□□□□ -0.54
PHACTR4-204ENST00000493669 ARHGAP44Q17R89 818 aa11.68□□□□□ -0.54
PHACTR4-204ENST00000493669 ENOSF1Q7L5Y1 443 aa11.68□□□□□ -0.54
PHACTR4-204ENST00000493669 GLYCTKQ8IVS8 523 aa11.68□□□□□ -0.54
PHACTR4-204ENST00000493669 ARHGEF19Q8IW93 802 aa11.68□□□□□ -0.54
PHACTR4-204ENST00000493669 FBXL13Q8NEE6 735 aa11.68□□□□□ -0.54
PHACTR4-204ENST00000493669 ZSWIM2Q8NEG5 633 aa11.68□□□□□ -0.54
PHACTR4-204ENST00000493669 MORC4Q8TE76 937 aa11.68□□□□□ -0.54
PHACTR4-204ENST00000493669 ZNF526Q8TF50 670 aaPredicted RBP11.68□□□□□ -0.54
PHACTR4-204ENST00000493669 RFFLQ8WZ73 363 aa11.68□□□□□ -0.54
PHACTR4-204ENST00000493669 SAAL1Q96ER3 474 aa11.68□□□□□ -0.54
PHACTR4-204ENST00000493669 PBKQ96KB5 322 aa11.68□□□□□ -0.54
PHACTR4-204ENST00000493669 TMEM134Q9H6X4 195 aa11.68□□□□□ -0.54
PHACTR4-204ENST00000493669 L1RE1Q9UN81 338 aa11.68□□□□□ -0.54
PHACTR4-204ENST00000493669 SCN4AP35499 1836 aa11.68□□□□□ -0.54
PHACTR4-204ENST00000493669 ZNF233A6NK53 670 aa11.68□□□□□ -0.54
PHACTR4-204ENST00000493669 NOP2P46087 812 aaKnown RBP11.68□□□□□ -0.54
PHACTR4-204ENST00000493669 LIG4P49917 911 aa11.68□□□□□ -0.54
PHACTR4-204ENST00000493669 STAT5BP51692 787 aa11.68□□□□□ -0.54
PHACTR4-204ENST00000493669 GALCP54803 685 aa11.68□□□□□ -0.54
PHACTR4-204ENST00000493669 SOX10P56693 466 aa11.68□□□□□ -0.54
PHACTR4-204ENST00000493669 KCTD2Q14681 263 aa11.68□□□□□ -0.54
PHACTR4-204ENST00000493669 RPS6KA1Q15418 735 aa11.68□□□□□ -0.54
PHACTR4-204ENST00000493669 FAM71AQ8IYT1 594 aa11.68□□□□□ -0.54
PHACTR4-204ENST00000493669 DEPTORQ8TB45 409 aa11.68□□□□□ -0.54
PHACTR4-204ENST00000493669 CTNNBL1Q8WYA6 563 aaPredicted RBP11.68□□□□□ -0.54
PHACTR4-204ENST00000493669 OPTNQ96CV9 577 aa11.68□□□□□ -0.54
PHACTR4-204ENST00000493669 PCYT2Q99447 389 aa11.68□□□□□ -0.54
PHACTR4-204ENST00000493669 UBXN6Q9BZV1 441 aa11.68□□□□□ -0.54
PHACTR4-204ENST00000493669 ABCB6Q9NP58 842 aa11.68□□□□□ -0.54
PHACTR4-204ENST00000493669 RBPJLQ9UBG7 517 aa11.68□□□□□ -0.54
PHACTR4-204ENST00000493669 ANKRD62A6NC57 917 aa11.67□□□□□ -0.54
PHACTR4-204ENST00000493669 FTCDO95954 541 aa11.67□□□□□ -0.54
PHACTR4-204ENST00000493669 GLRA2P23416 452 aa11.67□□□□□ -0.54
PHACTR4-204ENST00000493669 PLA2G4AP47712 749 aa11.67□□□□□ -0.54
PHACTR4-204ENST00000493669 HADHBP55084 474 aaKnown RBP11.67□□□□□ -0.54
PHACTR4-204ENST00000493669 CLDN10P78369 228 aa11.67□□□□□ -0.54
PHACTR4-204ENST00000493669 C2orf54Q08AI8 447 aa11.67□□□□□ -0.54
PHACTR4-204ENST00000493669 LDLRAD1Q5T700 205 aa11.67□□□□□ -0.54
PHACTR4-204ENST00000493669 SHC3Q92529 594 aa11.67□□□□□ -0.54
PHACTR4-204ENST00000493669 NT5C1BQ96P26 610 aa11.67□□□□□ -0.54
PHACTR4-204ENST00000493669 SUCLA2Q9P2R7 463 aaPredicted RBP11.67□□□□□ -0.54
PHACTR4-204ENST00000493669 PNMA3Q9UL41 463 aa11.67□□□□□ -0.54
PHACTR4-204ENST00000493669 LGR5O75473 907 aa11.67□□□□□ -0.54
PHACTR4-204ENST00000493669 SASH3O75995 380 aa11.67□□□□□ -0.54
PHACTR4-204ENST00000493669 KIF4AO95239 1232 aa11.67□□□□□ -0.54
PHACTR4-204ENST00000493669 GGPS1O95749 300 aa11.67□□□□□ -0.54
PHACTR4-204ENST00000493669 LDHAP00338 332 aaKnown RBP11.67□□□□□ -0.54
PHACTR4-204ENST00000493669 FAM193AP78312 1265 aa11.67□□□□□ -0.54
PHACTR4-204ENST00000493669 PSMD6Q15008 389 aa11.67□□□□□ -0.54
PHACTR4-204ENST00000493669 ASAP3Q8TDY4 903 aa11.67□□□□□ -0.54
PHACTR4-204ENST00000493669 MMP19Q99542 508 aa11.67□□□□□ -0.54
PHACTR4-204ENST00000493669 AZI2Q9H6S1 392 aa11.67□□□□□ -0.54
PHACTR4-204ENST00000493669 IQCA1LA6NCM1 817 aa11.66□□□□□ -0.54
PHACTR4-204ENST00000493669 LRRN2O75325 713 aa11.66□□□□□ -0.54
PHACTR4-204ENST00000493669 MAFO75444 373 aaPredicted RBP11.66□□□□□ -0.54
PHACTR4-204ENST00000493669 MAP2K1Q02750 393 aaPredicted RBP11.66□□□□□ -0.54
PHACTR4-204ENST00000493669 GPS2Q13227 327 aa11.66□□□□□ -0.54
PHACTR4-204ENST00000493669 SNAPC2Q13487 334 aa11.66□□□□□ -0.54
PHACTR4-204ENST00000493669 GPAT2Q6NUI2 795 aa11.66□□□□□ -0.54
PHACTR4-204ENST00000493669 RHOT2Q8IXI1 618 aa11.66□□□□□ -0.54
PHACTR4-204ENST00000493669 BBXQ8WY36 941 aaPredicted RBP11.66□□□□□ -0.54
PHACTR4-204ENST00000493669 CCDC127Q96BQ5 260 aa11.66□□□□□ -0.54
PHACTR4-204ENST00000493669 FGD4Q96M96 766 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms