RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 CABP7Q86V35 215 aa13.82□□□□□ -0.2
COL6A1-205ENST00000492851 CATSPER3Q86XQ3 398 aa13.82□□□□□ -0.2
COL6A1-205ENST00000492851 ZBTB8OSQ8IWT0 167 aa13.82□□□□□ -0.2
COL6A1-205ENST00000492851 PLCD3Q8N3E9 789 aa13.82□□□□□ -0.2
COL6A1-205ENST00000492851 SMG8Q8ND04 991 aaKnown RBP13.82□□□□□ -0.2
COL6A1-205ENST00000492851 FBXO18Q8NFZ0 1043 aa13.82□□□□□ -0.2
COL6A1-205ENST00000492851 PIGOQ8TEQ8 1089 aa13.82□□□□□ -0.2
COL6A1-205ENST00000492851 PBXIP1Q96AQ6 731 aa13.82□□□□□ -0.2
COL6A1-205ENST00000492851 COLEC11Q9BWP8 271 aa13.82□□□□□ -0.2
COL6A1-205ENST00000492851 C2orf40Q9H1Z8 148 aa13.82□□□□□ -0.2
COL6A1-205ENST00000492851 PRMT7Q9NVM4 692 aaPredicted RBP13.82□□□□□ -0.2
COL6A1-205ENST00000492851 NOL7Q9UMY1 257 aaKnown RBP13.82□□□□□ -0.2
COL6A1-205ENST00000492851 USTQ9Y2C2 406 aa13.82□□□□□ -0.2
COL6A1-205ENST00000492851 ATG2AQ2TAZ0 1938 aa13.82□□□□□ -0.2
COL6A1-205ENST00000492851 ZMYM2Q9UBW7 1377 aa13.82□□□□□ -0.2
COL6A1-205ENST00000492851 MYO7AQ13402 2215 aa13.81□□□□□ -0.2
COL6A1-205ENST00000492851 TMEM221A6NGB7 291 aa13.81□□□□□ -0.2
COL6A1-205ENST00000492851 ARL5CA6NH57 179 aa13.81□□□□□ -0.2
COL6A1-205ENST00000492851 M0R296 226 aa13.81□□□□□ -0.2
COL6A1-205ENST00000492851 SEC24BO95487 1268 aa13.81□□□□□ -0.2
COL6A1-205ENST00000492851 SOD2P04179 222 aa13.81□□□□□ -0.2
COL6A1-205ENST00000492851 OR52Z1P0C646 297 aa13.81□□□□□ -0.2
COL6A1-205ENST00000492851 SPATA31C1P0DKV0 1188 aa13.81□□□□□ -0.2
COL6A1-205ENST00000492851 ARF4P18085 180 aaPredicted RBP13.81□□□□□ -0.2
COL6A1-205ENST00000492851 KLRC2P26717 231 aa13.81□□□□□ -0.2
COL6A1-205ENST00000492851 HOXD11P31277 338 aaPredicted RBP13.81□□□□□ -0.2
COL6A1-205ENST00000492851 CAPSQ13938 189 aa13.81□□□□□ -0.2
COL6A1-205ENST00000492851 PTPN21Q16825 1174 aa13.81□□□□□ -0.2
COL6A1-205ENST00000492851 HAUS3Q68CZ6 603 aa13.81□□□□□ -0.2
COL6A1-205ENST00000492851 CYP26C1Q6V0L0 522 aa13.81□□□□□ -0.2
COL6A1-205ENST00000492851 HFE2Q6ZVN8 426 aa13.81□□□□□ -0.2
COL6A1-205ENST00000492851 ZBTB33Q86T24 672 aa13.81□□□□□ -0.2
COL6A1-205ENST00000492851 TMEM173Q86WV6 379 aaPredicted RBP13.81□□□□□ -0.2
COL6A1-205ENST00000492851 SUGP1Q8IWZ8 645 aaKnown RBP13.81□□□□□ -0.2
COL6A1-205ENST00000492851 UBALD2Q8IYN6 164 aa13.81□□□□□ -0.2
COL6A1-205ENST00000492851 SLC22A17Q8WUG5 538 aa13.81□□□□□ -0.2
COL6A1-205ENST00000492851 RAB34Q9BZG1 259 aa13.81□□□□□ -0.2
COL6A1-205ENST00000492851 POLR3FQ9H1D9 316 aaPredicted RBP13.81□□□□□ -0.2
COL6A1-205ENST00000492851 KIF3AQ9Y496 699 aa13.81□□□□□ -0.2
COL6A1-205ENST00000492851 POTEMA6NI47 508 aa13.8□□□□□ -0.2
COL6A1-205ENST00000492851 SPDYE4A6NLX3 237 aa13.8□□□□□ -0.2
COL6A1-205ENST00000492851 URODP06132 367 aa13.8□□□□□ -0.2
COL6A1-205ENST00000492851 OR1G1P47890 313 aa13.8□□□□□ -0.2
COL6A1-205ENST00000492851 FOSBP53539 338 aa13.8□□□□□ -0.2
COL6A1-205ENST00000492851 PDIA5Q14554 519 aa13.8□□□□□ -0.2
COL6A1-205ENST00000492851 PPP2R5AQ15172 486 aa13.8□□□□□ -0.2
COL6A1-205ENST00000492851 PTPN14Q15678 1187 aa13.8□□□□□ -0.2
COL6A1-205ENST00000492851 KIAA1841Q6NSI8 718 aa13.8□□□□□ -0.2
COL6A1-205ENST00000492851 PPP4R3CPQ6ZMV5 832 aa13.8□□□□□ -0.2
COL6A1-205ENST00000492851 NOSTRINQ8IVI9 506 aa13.8□□□□□ -0.2
COL6A1-205ENST00000492851 CCDC83Q8IWF9 413 aa13.8□□□□□ -0.2
COL6A1-205ENST00000492851 COLGALT2Q8IYK4 626 aa13.8□□□□□ -0.2
COL6A1-205ENST00000492851 GPR65Q8IYL9 337 aa13.8□□□□□ -0.2
COL6A1-205ENST00000492851 ASAP3Q8TDY4 903 aa13.8□□□□□ -0.2
COL6A1-205ENST00000492851 CPB2Q96IY4 423 aa13.8□□□□□ -0.2
COL6A1-205ENST00000492851 KLHL5Q96PQ7 755 aa13.8□□□□□ -0.2
COL6A1-205ENST00000492851 GAD1Q99259 594 aa13.8□□□□□ -0.2
COL6A1-205ENST00000492851 APOL5Q9BWW9 433 aa13.8□□□□□ -0.2
COL6A1-205ENST00000492851 EIF2AQ9BY44 585 aaKnown RBP13.8□□□□□ -0.2
COL6A1-205ENST00000492851 TMEM60Q9H2L4 133 aa13.8□□□□□ -0.2
COL6A1-205ENST00000492851 SFXN1Q9H9B4 322 aa13.8□□□□□ -0.2
COL6A1-205ENST00000492851 ARHGEF35A5YM69 484 aa13.79□□□□□ -0.2
COL6A1-205ENST00000492851 LRRIQ4A6NIV6 560 aa13.79□□□□□ -0.2
COL6A1-205ENST00000492851 USO1O60763 962 aaKnown RBP13.79□□□□□ -0.2
COL6A1-205ENST00000492851 LILRB3O75022 631 aa13.79□□□□□ -0.2
COL6A1-205ENST00000492851 ADH1AP07327 375 aa13.79□□□□□ -0.2
COL6A1-205ENST00000492851 CYP11B2P19099 503 aa13.79□□□□□ -0.2
COL6A1-205ENST00000492851 MLH1P40692 756 aa13.79□□□□□ -0.2
COL6A1-205ENST00000492851 AFF1P51825 1210 aaKnown RBP13.79□□□□□ -0.2
COL6A1-205ENST00000492851 GUCY1B3Q02153 619 aa13.79□□□□□ -0.2
COL6A1-205ENST00000492851 CREMQ03060 361 aa13.79□□□□□ -0.2
COL6A1-205ENST00000492851 DSC1Q08554 894 aa13.79□□□□□ -0.2
COL6A1-205ENST00000492851 ZNF174Q15697 407 aa13.79□□□□□ -0.2
COL6A1-205ENST00000492851 MAPK6Q16659 721 aa13.79□□□□□ -0.2
COL6A1-205ENST00000492851 AMHR2Q16671 573 aa13.79□□□□□ -0.2
COL6A1-205ENST00000492851 FAM187BQ17R55 369 aa13.79□□□□□ -0.2
COL6A1-205ENST00000492851 TTC38Q5R3I4 469 aa13.79□□□□□ -0.2
COL6A1-205ENST00000492851 RARS2Q5T160 578 aaKnown RBP13.79□□□□□ -0.2
COL6A1-205ENST00000492851 C15orf39Q6ZRI6 1047 aa13.79□□□□□ -0.2
COL6A1-205ENST00000492851 APBB1IPQ7Z5R6 666 aaPredicted RBP13.79□□□□□ -0.2
COL6A1-205ENST00000492851 ZDHHC14Q8IZN3 488 aa13.79□□□□□ -0.2
COL6A1-205ENST00000492851 HDAC7Q8WUI4 952 aa13.79□□□□□ -0.2
COL6A1-205ENST00000492851 AUTS2Q8WXX7 1259 aa13.79□□□□□ -0.2
COL6A1-205ENST00000492851 ACSF2Q96CM8 615 aaPredicted RBP13.79□□□□□ -0.2
COL6A1-205ENST00000492851 FBXL18Q96ME1 805 aa13.79□□□□□ -0.2
COL6A1-205ENST00000492851 RPS6KC1Q96S38 1066 aa13.79□□□□□ -0.2
COL6A1-205ENST00000492851 RNF39Q9H2S5 420 aa13.79□□□□□ -0.2
COL6A1-205ENST00000492851 FZD8Q9H461 694 aa13.79□□□□□ -0.2
COL6A1-205ENST00000492851 TSHZ2Q9NRE2 1034 aa13.79□□□□□ -0.2
COL6A1-205ENST00000492851 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.79□□□□□ -0.2
COL6A1-205ENST00000492851 SORCS3Q9UPU3 1222 aa13.79□□□□□ -0.2
COL6A1-205ENST00000492851 LAD1O00515 517 aa13.78□□□□□ -0.2
COL6A1-205ENST00000492851 WNT7AO00755 349 aa13.78□□□□□ -0.2
COL6A1-205ENST00000492851 N4BP3O15049 544 aa13.78□□□□□ -0.2
COL6A1-205ENST00000492851 MED24O75448 989 aa13.78□□□□□ -0.2
COL6A1-205ENST00000492851 CNPP09543 421 aaKnown RBP13.78□□□□□ -0.2
COL6A1-205ENST00000492851 EPCAMP16422 314 aa13.78□□□□□ -0.2
COL6A1-205ENST00000492851 GLUD2P49448 558 aa13.78□□□□□ -0.2
COL6A1-205ENST00000492851 FXR2P51116 673 aaKnown RBP eCLIP13.78□□□□□ -0.2
COL6A1-205ENST00000492851 CLCN4P51793 760 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms