RNA–Protein interactions for RNA: ENST00000492796.5

CDC42SE1-206, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 1,174 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-206ENST00000492796 LRRC55Q6ZSA7 311 aa11.74□□□□□ -0.53
CDC42SE1-206ENST00000492796 APBB1IPQ7Z5R6 666 aaPredicted RBP11.74□□□□□ -0.53
CDC42SE1-206ENST00000492796 MICALL1Q8N3F8 863 aa11.74□□□□□ -0.53
CDC42SE1-206ENST00000492796 KLHL23Q8NBE8 558 aa11.74□□□□□ -0.53
CDC42SE1-206ENST00000492796 KCNN1Q92952 543 aa11.74□□□□□ -0.53
CDC42SE1-206ENST00000492796 ZNF558Q96NG5 402 aa11.74□□□□□ -0.53
CDC42SE1-206ENST00000492796 REEP2Q9BRK0 252 aa11.74□□□□□ -0.53
CDC42SE1-206ENST00000492796 ADPGKQ9BRR6 497 aa11.74□□□□□ -0.53
CDC42SE1-206ENST00000492796 NTPCRQ9BSD7 190 aaKnown RBP11.74□□□□□ -0.53
CDC42SE1-206ENST00000492796 PDZD7Q9H5P4 517 aa11.74□□□□□ -0.53
CDC42SE1-206ENST00000492796 POLD4Q9HCU8 107 aa11.74□□□□□ -0.53
CDC42SE1-206ENST00000492796 TFIP11Q9UBB9 837 aaKnown RBP11.74□□□□□ -0.53
CDC42SE1-206ENST00000492796 PLAGL2Q9UPG8 496 aa11.74□□□□□ -0.53
CDC42SE1-206ENST00000492796 ATP6V1DQ9Y5K8 247 aa11.74□□□□□ -0.53
CDC42SE1-206ENST00000492796 MEIS3P2A8K0S8 358 aa11.73□□□□□ -0.53
CDC42SE1-206ENST00000492796 GRM6O15303 877 aa11.73□□□□□ -0.53
CDC42SE1-206ENST00000492796 NPTXRO95502 500 aa11.73□□□□□ -0.53
CDC42SE1-206ENST00000492796 ITGB1P05556 798 aa11.73□□□□□ -0.53
CDC42SE1-206ENST00000492796 KRT18P05783 430 aaKnown RBP11.73□□□□□ -0.53
CDC42SE1-206ENST00000492796 LIG1P18858 919 aa11.73□□□□□ -0.53
CDC42SE1-206ENST00000492796 ABCD1P33897 745 aa11.73□□□□□ -0.53
CDC42SE1-206ENST00000492796 ZNF131P52739 623 aa11.73□□□□□ -0.53
CDC42SE1-206ENST00000492796 PLCB3Q01970 1234 aa11.73□□□□□ -0.53
CDC42SE1-206ENST00000492796 CCDC85BQ15834 202 aaPredicted RBP11.73□□□□□ -0.53
CDC42SE1-206ENST00000492796 DCAF4L1Q3SXM0 396 aa11.73□□□□□ -0.53
CDC42SE1-206ENST00000492796 LONRF3Q496Y0 759 aa11.73□□□□□ -0.53
CDC42SE1-206ENST00000492796 KCNT2Q6UVM3 1135 aa11.73□□□□□ -0.53
CDC42SE1-206ENST00000492796 THNSL1Q8IYQ7 743 aa11.73□□□□□ -0.53
CDC42SE1-206ENST00000492796 PPM1EQ8WY54 764 aa11.73□□□□□ -0.53
CDC42SE1-206ENST00000492796 MRPL4Q9BYD3 311 aaKnown RBP11.73□□□□□ -0.53
CDC42SE1-206ENST00000492796 PARVGQ9HBI0 331 aa11.73□□□□□ -0.53
CDC42SE1-206ENST00000492796 ALG13Q9NP73 1137 aaKnown RBP11.73□□□□□ -0.53
CDC42SE1-206ENST00000492796 TBC1D13Q9NVG8 400 aa11.73□□□□□ -0.53
CDC42SE1-206ENST00000492796 KANSL3Q9P2N6 904 aa11.73□□□□□ -0.53
CDC42SE1-206ENST00000492796 HCSTQ9UBK5 93 aa11.73□□□□□ -0.53
CDC42SE1-206ENST00000492796 LZTS1Q9Y250 596 aa11.73□□□□□ -0.53
CDC42SE1-206ENST00000492796 INPP5FQ9Y2H2 1132 aa11.73□□□□□ -0.53
CDC42SE1-206ENST00000492796 GIT1Q9Y2X7 761 aa11.73□□□□□ -0.53
CDC42SE1-206ENST00000492796 TDRD15B5MCY1 1934 aaKnown RBP11.72□□□□□ -0.53
CDC42SE1-206ENST00000492796 NPHP3-ACAD11A0A0J9YXS1 232 aa11.72□□□□□ -0.53
CDC42SE1-206ENST00000492796 SLC16A4O15374 487 aa11.72□□□□□ -0.53
CDC42SE1-206ENST00000492796 TBCAO75347 108 aaKnown RBP11.72□□□□□ -0.53
CDC42SE1-206ENST00000492796 FGF18O76093 207 aa11.72□□□□□ -0.53
CDC42SE1-206ENST00000492796 FAM13AO94988 1023 aa11.72□□□□□ -0.53
CDC42SE1-206ENST00000492796 EDN1P05305 212 aa11.72□□□□□ -0.53
CDC42SE1-206ENST00000492796 STAT6P42226 847 aa11.72□□□□□ -0.53
CDC42SE1-206ENST00000492796 ALDH7A1P49419 539 aaKnown RBP11.72□□□□□ -0.53
CDC42SE1-206ENST00000492796 NCKAP1LP55160 1127 aa11.72□□□□□ -0.53
CDC42SE1-206ENST00000492796 KRT85P78386 507 aa11.72□□□□□ -0.53
CDC42SE1-206ENST00000492796 CACNB1Q02641 598 aaPredicted RBP11.72□□□□□ -0.53
CDC42SE1-206ENST00000492796 DNM1Q05193 864 aaKnown RBP11.72□□□□□ -0.53
CDC42SE1-206ENST00000492796 RNASELQ05823 741 aaKnown RBP11.72□□□□□ -0.53
CDC42SE1-206ENST00000492796 STRN3Q13033 797 aa11.72□□□□□ -0.53
CDC42SE1-206ENST00000492796 GIT2Q14161 759 aa11.72□□□□□ -0.53
CDC42SE1-206ENST00000492796 DHX8Q14562 1220 aaKnown RBP11.72□□□□□ -0.53
CDC42SE1-206ENST00000492796 FOXD4L6Q3SYB3 417 aaPredicted RBP11.72□□□□□ -0.53
CDC42SE1-206ENST00000492796 ATF7IP2Q5U623 682 aa11.72□□□□□ -0.53
CDC42SE1-206ENST00000492796 FOXD4L3Q6VB84 417 aaPredicted RBP11.72□□□□□ -0.53
CDC42SE1-206ENST00000492796 SV2BQ7L1I2 683 aa11.72□□□□□ -0.53
CDC42SE1-206ENST00000492796 CDR2LQ86X02 465 aaPredicted RBP11.72□□□□□ -0.53
CDC42SE1-206ENST00000492796 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.72□□□□□ -0.53
CDC42SE1-206ENST00000492796 TMEM161BQ8NDZ6 487 aa11.72□□□□□ -0.53
CDC42SE1-206ENST00000492796 SPPL3Q8TCT6 385 aa11.72□□□□□ -0.53
CDC42SE1-206ENST00000492796 POF1BQ8WVV4 589 aa11.72□□□□□ -0.53
CDC42SE1-206ENST00000492796 CUEDC2Q9H467 287 aa11.72□□□□□ -0.53
CDC42SE1-206ENST00000492796 NXF3Q9H4D5 531 aaKnown RBP11.72□□□□□ -0.53
CDC42SE1-206ENST00000492796 NSUN3Q9H649 340 aaKnown RBP11.72□□□□□ -0.53
CDC42SE1-206ENST00000492796 THEGQ9P2T0 379 aa11.72□□□□□ -0.53
CDC42SE1-206ENST00000492796 TNFSF13BQ9Y275 285 aa11.72□□□□□ -0.53
CDC42SE1-206ENST00000492796 ZDHHC9Q9Y397 364 aa11.72□□□□□ -0.53
CDC42SE1-206ENST00000492796 PRRC2BQ5JSZ5 2229 aaKnown RBP11.72□□□□□ -0.53
CDC42SE1-206ENST00000492796 ARL5CA6NH57 179 aa11.71□□□□□ -0.53
CDC42SE1-206ENST00000492796 TTLL13PA6NNM8 815 aa11.71□□□□□ -0.53
CDC42SE1-206ENST00000492796 SFI1A8K8P3 1242 aa11.71□□□□□ -0.53
CDC42SE1-206ENST00000492796 ZC3H11AO75152 810 aaKnown RBP eCLIP11.71□□□□□ -0.53
CDC42SE1-206ENST00000492796 MAPTP10636 758 aaKnown RBP11.71□□□□□ -0.53
CDC42SE1-206ENST00000492796 MLH1P40692 756 aa11.71□□□□□ -0.53
CDC42SE1-206ENST00000492796 ME1P48163 572 aa11.71□□□□□ -0.53
CDC42SE1-206ENST00000492796 BCAR1P56945 870 aa11.71□□□□□ -0.53
CDC42SE1-206ENST00000492796 KRT17Q04695 432 aa11.71□□□□□ -0.53
CDC42SE1-206ENST00000492796 SKIV2LQ15477 1246 aaKnown RBP11.71□□□□□ -0.53
CDC42SE1-206ENST00000492796 AXDND1Q5T1B0 1012 aaPredicted RBP11.71□□□□□ -0.53
CDC42SE1-206ENST00000492796 NT5DC1Q5TFE4 455 aa11.71□□□□□ -0.53
CDC42SE1-206ENST00000492796 PDE12Q6L8Q7 609 aaKnown RBP11.71□□□□□ -0.53
CDC42SE1-206ENST00000492796 TAS1R3Q7RTX0 852 aa11.71□□□□□ -0.53
CDC42SE1-206ENST00000492796 SLC39A11Q8N1S5 342 aa11.71□□□□□ -0.53
CDC42SE1-206ENST00000492796 MYCT1Q8N699 235 aa11.71□□□□□ -0.53
CDC42SE1-206ENST00000492796 MRPS27Q92552 414 aaKnown RBP11.71□□□□□ -0.53
CDC42SE1-206ENST00000492796 PPP2R3CQ969Q6 453 aa11.71□□□□□ -0.53
CDC42SE1-206ENST00000492796 ACO2Q99798 780 aaKnown RBP11.71□□□□□ -0.53
CDC42SE1-206ENST00000492796 TMEM175Q9BSA9 504 aa11.71□□□□□ -0.53
CDC42SE1-206ENST00000492796 APOL6Q9BWW8 343 aa11.71□□□□□ -0.53
CDC42SE1-206ENST00000492796 RNF39Q9H2S5 420 aa11.71□□□□□ -0.53
CDC42SE1-206ENST00000492796 TNMDQ9H2S6 317 aa11.71□□□□□ -0.53
CDC42SE1-206ENST00000492796 NRDE2Q9H7Z3 1164 aa11.71□□□□□ -0.53
CDC42SE1-206ENST00000492796 TLR9Q9NR96 1032 aa11.71□□□□□ -0.53
CDC42SE1-206ENST00000492796 SPG21Q9NZD8 308 aa11.71□□□□□ -0.53
CDC42SE1-206ENST00000492796 STK39Q9UEW8 545 aa11.71□□□□□ -0.53
CDC42SE1-206ENST00000492796 PUF60Q9UHX1 559 aaKnown RBP11.71□□□□□ -0.53
CDC42SE1-206ENST00000492796 RCOR1Q9UKL0 485 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms