RNA–Protein interactions for RNA: ENST00000491013.5

FDPS-216, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 5

Gene FDPS, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-216ENST00000491013 SLC39A11Q8N1S5 342 aa16.2■□□□□ 0.18
FDPS-216ENST00000491013 URGCPQ8TCY9 931 aa16.2■□□□□ 0.18
FDPS-216ENST00000491013 MRPS27Q92552 414 aaKnown RBP16.2■□□□□ 0.18
FDPS-216ENST00000491013 EPSTI1Q96J88 318 aa16.2■□□□□ 0.18
FDPS-216ENST00000491013 NTPCRQ9BSD7 190 aaKnown RBP16.2■□□□□ 0.18
FDPS-216ENST00000491013 TRIM6Q9C030 488 aaPredicted RBP16.2■□□□□ 0.18
FDPS-216ENST00000491013 TMEM134Q9H6X4 195 aa16.2■□□□□ 0.18
FDPS-216ENST00000491013 NRDE2Q9H7Z3 1164 aa16.2■□□□□ 0.18
FDPS-216ENST00000491013 SPG21Q9NZD8 308 aa16.2■□□□□ 0.18
FDPS-216ENST00000491013 ARHGAP28Q9P2N2 729 aa16.2■□□□□ 0.18
FDPS-216ENST00000491013 KCNG1Q9UIX4 513 aa16.2■□□□□ 0.18
FDPS-216ENST00000491013 HES2Q9Y543 173 aa16.2■□□□□ 0.18
FDPS-216ENST00000491013 TCHHQ07283 1943 aa16.19■□□□□ 0.18
FDPS-216ENST00000491013 BDP1A6H8Y1 2624 aa16.19■□□□□ 0.18
FDPS-216ENST00000491013 ZMYM2Q9UBW7 1377 aa16.19■□□□□ 0.18
FDPS-216ENST00000491013 CCDC169A6NNP5 214 aa16.19■□□□□ 0.18
FDPS-216ENST00000491013 K7ERI5 159 aa16.19■□□□□ 0.18
FDPS-216ENST00000491013 N4BP3O15049 544 aa16.19■□□□□ 0.18
FDPS-216ENST00000491013 NCK2O43639 380 aa16.19■□□□□ 0.18
FDPS-216ENST00000491013 NPTXRO95502 500 aa16.19■□□□□ 0.18
FDPS-216ENST00000491013 ZSCAN22P10073 491 aaPredicted RBP16.19■□□□□ 0.18
FDPS-216ENST00000491013 IRS1P35568 1242 aa16.19■□□□□ 0.18
FDPS-216ENST00000491013 ALDH7A1P49419 539 aaKnown RBP16.19■□□□□ 0.18
FDPS-216ENST00000491013 AFF1P51825 1210 aaKnown RBP16.19■□□□□ 0.18
FDPS-216ENST00000491013 RNASELQ05823 741 aaKnown RBP16.19■□□□□ 0.18
FDPS-216ENST00000491013 ARSHQ5FYA8 562 aa16.19■□□□□ 0.18
FDPS-216ENST00000491013 SPECC1Q5M775 1068 aa16.19■□□□□ 0.18
FDPS-216ENST00000491013 USP49Q70CQ1 688 aa16.19■□□□□ 0.18
FDPS-216ENST00000491013 HACE1Q8IYU2 909 aa16.19■□□□□ 0.18
FDPS-216ENST00000491013 PABPC5Q96DU9 382 aaKnown RBP16.19■□□□□ 0.18
FDPS-216ENST00000491013 ZNF396Q96N95 335 aaPredicted RBP16.19■□□□□ 0.18
FDPS-216ENST00000491013 CLIC6Q96NY7 704 aa16.19■□□□□ 0.18
FDPS-216ENST00000491013 NXF3Q9H4D5 531 aaKnown RBP16.19■□□□□ 0.18
FDPS-216ENST00000491013 PDZD7Q9H5P4 517 aa16.19■□□□□ 0.18
FDPS-216ENST00000491013 UBE2ZQ9H832 354 aaPredicted RBP16.19■□□□□ 0.18
FDPS-216ENST00000491013 TLR9Q9NR96 1032 aa16.19■□□□□ 0.18
FDPS-216ENST00000491013 PUF60Q9UHX1 559 aaKnown RBP16.19■□□□□ 0.18
FDPS-216ENST00000491013 GIT1Q9Y2X7 761 aa16.19■□□□□ 0.18
FDPS-216ENST00000491013 RBM19Q9Y4C8 960 aaKnown RBP16.19■□□□□ 0.18
FDPS-216ENST00000491013 PHLPP2Q6ZVD8 1323 aa16.19■□□□□ 0.18
FDPS-216ENST00000491013 ARL5CA6NH57 179 aa16.18■□□□□ 0.18
FDPS-216ENST00000491013 SFI1A8K8P3 1242 aa16.18■□□□□ 0.18
FDPS-216ENST00000491013 FSCN2O14926 492 aa16.18■□□□□ 0.18
FDPS-216ENST00000491013 ZC3H11AO75152 810 aaKnown RBP eCLIP16.18■□□□□ 0.184e-6■■□□□ 12.7
FDPS-216ENST00000491013 DDHD2O94830 711 aa16.18■□□□□ 0.18
FDPS-216ENST00000491013 F13A1P00488 732 aa16.18■□□□□ 0.18
FDPS-216ENST00000491013 GALTP07902 379 aa16.18■□□□□ 0.18
FDPS-216ENST00000491013 PLS3P13797 630 aa16.18■□□□□ 0.18
FDPS-216ENST00000491013 LIG1P18858 919 aa16.18■□□□□ 0.18
FDPS-216ENST00000491013 DDIT3P35638 169 aa16.18■□□□□ 0.18
FDPS-216ENST00000491013 ERVFC1P60507 584 aa16.18■□□□□ 0.18
FDPS-216ENST00000491013 KRT17Q04695 432 aa16.18■□□□□ 0.18
FDPS-216ENST00000491013 RAD51AP2Q09MP3 1159 aa16.18■□□□□ 0.18
FDPS-216ENST00000491013 HYAL1Q12794 435 aa16.18■□□□□ 0.18
FDPS-216ENST00000491013 NT5DC1Q5TFE4 455 aa16.18■□□□□ 0.18
FDPS-216ENST00000491013 PDE12Q6L8Q7 609 aaKnown RBP16.18■□□□□ 0.18
FDPS-216ENST00000491013 ZNF280BQ86YH2 543 aa16.18■□□□□ 0.18
FDPS-216ENST00000491013 KRI1Q8N9T8 703 aaKnown RBP16.18■□□□□ 0.18
FDPS-216ENST00000491013 SPRYD3Q8NCJ5 442 aa16.18■□□□□ 0.18
FDPS-216ENST00000491013 LINC00301Q8NCQ3 95 aa16.18■□□□□ 0.18
FDPS-216ENST00000491013 RASSF8Q8NHQ8 419 aa16.18■□□□□ 0.18
FDPS-216ENST00000491013 SPIRE2Q8WWL2 714 aa16.18■□□□□ 0.18
FDPS-216ENST00000491013 RAD54LQ92698 747 aa16.18■□□□□ 0.18
FDPS-216ENST00000491013 SYMPKQ92797 1274 aaKnown RBP16.18■□□□□ 0.18
FDPS-216ENST00000491013 PPP2R3CQ969Q6 453 aa16.18■□□□□ 0.18
FDPS-216ENST00000491013 GAD1Q99259 594 aa16.18■□□□□ 0.18
FDPS-216ENST00000491013 KMT5AQ9NQR1 393 aa16.18■□□□□ 0.18
FDPS-216ENST00000491013 CCDC39Q9UFE4 941 aa16.18■□□□□ 0.18
FDPS-216ENST00000491013 USP20Q9Y2K6 914 aa16.18■□□□□ 0.18
FDPS-216ENST00000491013 NPHP3-ACAD11A0A0J9YXS1 232 aa16.17■□□□□ 0.18
FDPS-216ENST00000491013 NT5C1B-RDH14C9J2C7 533 aa16.17■□□□□ 0.18
FDPS-216ENST00000491013 B4GALT3O60512 393 aa16.17■□□□□ 0.18
FDPS-216ENST00000491013 CSPG5O95196 566 aa16.17■□□□□ 0.18
FDPS-216ENST00000491013 POMCP01189 267 aa16.17■□□□□ 0.18
FDPS-216ENST00000491013 BMP1P13497 986 aa16.17■□□□□ 0.18
FDPS-216ENST00000491013 MLH1P40692 756 aa16.17■□□□□ 0.18
FDPS-216ENST00000491013 MCM6Q14566 821 aa16.17■□□□□ 0.18
FDPS-216ENST00000491013 STK38Q15208 465 aa16.17■□□□□ 0.18
FDPS-216ENST00000491013 TMEM132AQ24JP5 1023 aa16.17■□□□□ 0.18
FDPS-216ENST00000491013 CTC1Q2NKJ3 1217 aa16.17■□□□□ 0.18
FDPS-216ENST00000491013 ATF7IP2Q5U623 682 aa16.17■□□□□ 0.18
FDPS-216ENST00000491013 EEF1DP3Q658K8 133 aa16.17■□□□□ 0.18
FDPS-216ENST00000491013 TAS1R3Q7RTX0 852 aa16.17■□□□□ 0.18
FDPS-216ENST00000491013 GPBP1Q86WP2 473 aa16.17■□□□□ 0.18
FDPS-216ENST00000491013 GSTCDQ8NEC7 633 aa16.17■□□□□ 0.18
FDPS-216ENST00000491013 MICAL1Q8TDZ2 1067 aa16.17■□□□□ 0.18
FDPS-216ENST00000491013 LARP4BQ92615 738 aaKnown RBP16.17■□□□□ 0.18
FDPS-216ENST00000491013 FAM193BQ96PV7 902 aaPredicted RBP16.17■□□□□ 0.18
FDPS-216ENST00000491013 ADPGKQ9BRR6 497 aa16.17■□□□□ 0.18
FDPS-216ENST00000491013 TMEM175Q9BSA9 504 aa16.17■□□□□ 0.18
FDPS-216ENST00000491013 APOL6Q9BWW8 343 aa16.17■□□□□ 0.18
FDPS-216ENST00000491013 COL25A1Q9BXS0 654 aaPredicted RBP16.17■□□□□ 0.18
FDPS-216ENST00000491013 MIOSQ9NXC5 875 aa16.17■□□□□ 0.18
FDPS-216ENST00000491013 DNAJB4Q9UDY4 337 aa16.17■□□□□ 0.18
FDPS-216ENST00000491013 ODF2LQ9ULJ1 636 aa16.17■□□□□ 0.18
FDPS-216ENST00000491013 DLL1O00548 723 aa16.16■□□□□ 0.18
FDPS-216ENST00000491013 SPTLC2O15270 562 aa16.16■□□□□ 0.18
FDPS-216ENST00000491013 SLC16A4O15374 487 aa16.16■□□□□ 0.18
FDPS-216ENST00000491013 PPP6R2O75170 966 aa16.16■□□□□ 0.18
FDPS-216ENST00000491013 AKAP5P24588 427 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms