RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 CCNB1P14635 433 aa20.79■□□□□ 0.92
SNAPC3-206ENST00000490969 CREB1P16220 341 aa20.79■□□□□ 0.92
SNAPC3-206ENST00000490969 AP1ARQ63HQ0 302 aa20.79■□□□□ 0.92
SNAPC3-206ENST00000490969 CDC42EP5Q6NZY7 148 aa20.79■□□□□ 0.92
SNAPC3-206ENST00000490969 SPDYE1Q8NFV5 336 aaPredicted RBP20.79■□□□□ 0.92
SNAPC3-206ENST00000490969 PARD3BQ8TEW8 1205 aa20.79■□□□□ 0.92
SNAPC3-206ENST00000490969 TRIM7Q9C029 511 aa20.79■□□□□ 0.92
SNAPC3-206ENST00000490969 THAP2Q9H0W7 228 aa20.79■□□□□ 0.92
SNAPC3-206ENST00000490969 MLXIPLQ9NP71 852 aa20.79■□□□□ 0.92
SNAPC3-206ENST00000490969 PFASO15067 1338 aa20.79■□□□□ 0.92
SNAPC3-206ENST00000490969 CTNNA2P26232 953 aa20.78■□□□□ 0.92
SNAPC3-206ENST00000490969 CCDC137Q6PK04 289 aaKnown RBP20.78■□□□□ 0.92
SNAPC3-206ENST00000490969 EPM2AIP1Q7L775 607 aaPredicted RBP20.78■□□□□ 0.92
SNAPC3-206ENST00000490969 SFR1Q86XK3 245 aa20.78■□□□□ 0.92
SNAPC3-206ENST00000490969 TTLL6Q8N841 843 aa20.78■□□□□ 0.92
SNAPC3-206ENST00000490969 CKAP2Q8WWK9 683 aa20.78■□□□□ 0.92
SNAPC3-206ENST00000490969 SYT11Q9BT88 431 aa20.78■□□□□ 0.92
SNAPC3-206ENST00000490969 OSBPL1AQ9BXW6 950 aa20.78■□□□□ 0.92
SNAPC3-206ENST00000490969 SLC16A3O15427 465 aaKnown RBP20.78■□□□□ 0.92
SNAPC3-206ENST00000490969 ALAS1P13196 640 aa20.78■□□□□ 0.92
SNAPC3-206ENST00000490969 SKIV2L2P42285 1042 aaKnown RBP20.78■□□□□ 0.92
SNAPC3-206ENST00000490969 C16orf86Q6ZW13 317 aa20.78■□□□□ 0.92
SNAPC3-206ENST00000490969 CCDC25Q86WR0 208 aa20.78■□□□□ 0.92
SNAPC3-206ENST00000490969 ANKRD42Q8N9B4 389 aa20.78■□□□□ 0.92
SNAPC3-206ENST00000490969 ART4Q93070 314 aa20.78■□□□□ 0.92
SNAPC3-206ENST00000490969 ZBTB10Q96DT7 871 aa20.78■□□□□ 0.92
SNAPC3-206ENST00000490969 TAOK3Q9H2K8 898 aa20.78■□□□□ 0.92
SNAPC3-206ENST00000490969 USP40Q9NVE5 1235 aa20.78■□□□□ 0.92
SNAPC3-206ENST00000490969 ANKRD63C9JTQ0 380 aa20.77■□□□□ 0.92
SNAPC3-206ENST00000490969 MED24O75448 989 aa20.77■□□□□ 0.92
SNAPC3-206ENST00000490969 GIT2Q14161 759 aa20.77■□□□□ 0.92
SNAPC3-206ENST00000490969 ZDHHC14Q8IZN3 488 aa20.77■□□□□ 0.92
SNAPC3-206ENST00000490969 ZNF277Q9NRM2 450 aaPredicted RBP20.77■□□□□ 0.92
SNAPC3-206ENST00000490969 TAS2R14Q9NYV8 317 aa20.77■□□□□ 0.92
SNAPC3-206ENST00000490969 KCNG1Q9UIX4 513 aa20.77■□□□□ 0.92
SNAPC3-206ENST00000490969 ALG6Q9Y672 507 aa20.77■□□□□ 0.92
SNAPC3-206ENST00000490969 HGSO14964 777 aaPredicted RBP20.77■□□□□ 0.92
SNAPC3-206ENST00000490969 RPL13P26373 211 aaKnown RBP20.77■□□□□ 0.92
SNAPC3-206ENST00000490969 CLK2P49760 499 aaKnown RBP20.77■□□□□ 0.92
SNAPC3-206ENST00000490969 DRAP1Q14919 205 aaPredicted RBP20.77■□□□□ 0.92
SNAPC3-206ENST00000490969 TEX9Q8N6V9 391 aa20.77■□□□□ 0.92
SNAPC3-206ENST00000490969 GDAP1Q8TB36 358 aa20.77■□□□□ 0.92
SNAPC3-206ENST00000490969 KRT35Q92764 455 aa20.77■□□□□ 0.92
SNAPC3-206ENST00000490969 STK33Q9BYT3 514 aa20.77■□□□□ 0.92
SNAPC3-206ENST00000490969 TYW1Q9NV66 732 aaKnown RBP20.77■□□□□ 0.92
SNAPC3-206ENST00000490969 ASTN1O14525 1302 aa20.77■□□□□ 0.92
SNAPC3-206ENST00000490969 FOCADQ5VW36 1801 aa20.76■□□□□ 0.91
SNAPC3-206ENST00000490969 POTEFA5A3E0 1075 aa20.76■□□□□ 0.91
SNAPC3-206ENST00000490969 HIP1RO75146 1068 aa20.76■□□□□ 0.91
SNAPC3-206ENST00000490969 UNC5CO95185 931 aa20.76■□□□□ 0.91
SNAPC3-206ENST00000490969 POTEIP0CG38 1075 aa20.76■□□□□ 0.91
SNAPC3-206ENST00000490969 CRKP46108 304 aa20.76■□□□□ 0.91
SNAPC3-206ENST00000490969 MGAT5Q09328 741 aa20.76■□□□□ 0.91
SNAPC3-206ENST00000490969 POTEGQ6S5H5 508 aa20.76■□□□□ 0.91
SNAPC3-206ENST00000490969 POTEEQ6S8J3 1075 aa20.76■□□□□ 0.91
SNAPC3-206ENST00000490969 TRMT10CQ7L0Y3 403 aaKnown RBP20.76■□□□□ 0.91
SNAPC3-206ENST00000490969 UBL4BQ8N7F7 174 aa20.76■□□□□ 0.91
SNAPC3-206ENST00000490969 RAB3IPQ96QF0 476 aaPredicted RBP20.76■□□□□ 0.91
SNAPC3-206ENST00000490969 DDX23Q9BUQ8 820 aaKnown RBP20.76■□□□□ 0.91
SNAPC3-206ENST00000490969 ETNK1Q9HBU6 452 aa20.76■□□□□ 0.91
SNAPC3-206ENST00000490969 KCNK9Q9NPC2 374 aa20.76■□□□□ 0.91
SNAPC3-206ENST00000490969 KLHL14Q9P2G3 628 aa20.76■□□□□ 0.91
SNAPC3-206ENST00000490969 ANKRD62A6NC57 917 aa20.76■□□□□ 0.91
SNAPC3-206ENST00000490969 KLHL33A6NCF5 533 aa20.76■□□□□ 0.91
SNAPC3-206ENST00000490969 MIF4GDA9UHW6 222 aaKnown RBP20.76■□□□□ 0.91
SNAPC3-206ENST00000490969 MARCKSL1P49006 195 aa20.76■□□□□ 0.91
SNAPC3-206ENST00000490969 STRIP1Q5VSL9 837 aa20.76■□□□□ 0.91
SNAPC3-206ENST00000490969 SLF2Q8IX21 1173 aa20.76■□□□□ 0.91
SNAPC3-206ENST00000490969 ANKLE1Q8NAG6 615 aa20.76■□□□□ 0.91
SNAPC3-206ENST00000490969 SERPINB12Q96P63 405 aa20.76■□□□□ 0.91
SNAPC3-206ENST00000490969 SEPT11Q9NVA2 429 aaKnown RBP20.76■□□□□ 0.91
SNAPC3-206ENST00000490969 DNAJC12Q9UKB3 198 aa20.76■□□□□ 0.91
SNAPC3-206ENST00000490969 PCDHB13Q9Y5F0 798 aa20.76■□□□□ 0.91
SNAPC3-206ENST00000490969 EIF4E1BA6NMX2 242 aaKnown RBP20.75■□□□□ 0.91
SNAPC3-206ENST00000490969 CLIC2O15247 247 aa20.75■□□□□ 0.91
SNAPC3-206ENST00000490969 R3HDM1Q15032 1099 aaKnown RBP20.75■□□□□ 0.91
SNAPC3-206ENST00000490969 ZNF568Q3ZCX4 644 aa20.75■□□□□ 0.91
SNAPC3-206ENST00000490969 RNF43Q68DV7 783 aa20.75■□□□□ 0.91
SNAPC3-206ENST00000490969 CGB2Q6NT52 195 aa20.75■□□□□ 0.91
SNAPC3-206ENST00000490969 MAEAQ7L5Y9 396 aa20.75■□□□□ 0.91
SNAPC3-206ENST00000490969 UTP4Q969X6 686 aaKnown RBP20.75■□□□□ 0.91
SNAPC3-206ENST00000490969 TGS1Q96RS0 853 aaKnown RBP20.75■□□□□ 0.91
SNAPC3-206ENST00000490969 REEP2Q9BRK0 252 aa20.75■□□□□ 0.91
SNAPC3-206ENST00000490969 CDC42EP4Q9H3Q1 356 aaKnown RBP20.75■□□□□ 0.91
SNAPC3-206ENST00000490969 NKX1-2Q9UD57 310 aaPredicted RBP20.75■□□□□ 0.91
SNAPC3-206ENST00000490969 SUGT1Q9Y2Z0 365 aa20.75■□□□□ 0.91
SNAPC3-206ENST00000490969 GH1P01241 217 aa20.75■□□□□ 0.91
SNAPC3-206ENST00000490969 ATP4AP20648 1035 aa20.75■□□□□ 0.91
SNAPC3-206ENST00000490969 TNFAIP3P21580 790 aa20.75■□□□□ 0.91
SNAPC3-206ENST00000490969 ATP5DP30049 168 aa20.75■□□□□ 0.91
SNAPC3-206ENST00000490969 STAT3P40763 770 aa20.75■□□□□ 0.91
SNAPC3-206ENST00000490969 MKRN3Q13064 507 aaKnown RBP20.75■□□□□ 0.91
SNAPC3-206ENST00000490969 TRIM68Q6AZZ1 485 aa20.75■□□□□ 0.91
SNAPC3-206ENST00000490969 PPP1R18Q6NYC8 613 aa20.75■□□□□ 0.91
SNAPC3-206ENST00000490969 CYFIP1Q7L576 1253 aa20.75■□□□□ 0.91
SNAPC3-206ENST00000490969 PALB2Q86YC2 1186 aa20.75■□□□□ 0.91
SNAPC3-206ENST00000490969 CLEC10AQ8IUN9 316 aa20.75■□□□□ 0.91
SNAPC3-206ENST00000490969 CCDC105Q8IYK2 499 aa20.75■□□□□ 0.91
SNAPC3-206ENST00000490969 RNF217Q8TC41 542 aa20.75■□□□□ 0.91
SNAPC3-206ENST00000490969 TEKT1Q969V4 418 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms