RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 VPS52Q8N1B4 723 aa34.71■■■■□ 3.15
LDB1-204ENST00000490751 FAM193BQ96PV7 902 aaPredicted RBP34.71■■■■□ 3.15
LDB1-204ENST00000490751 APOL6Q9BWW8 343 aa34.71■■■■□ 3.15
LDB1-204ENST00000490751 C2orf40Q9H1Z8 148 aa34.71■■■■□ 3.15
LDB1-204ENST00000490751 EPHX3Q9H6B9 360 aa34.71■■■■□ 3.15
LDB1-204ENST00000490751 CDC25AP30304 524 aa34.7■■■■□ 3.15
LDB1-204ENST00000490751 CA8P35219 290 aa34.7■■■■□ 3.15
LDB1-204ENST00000490751 ATP2C1P98194 919 aaPredicted RBP34.7■■■■□ 3.15
LDB1-204ENST00000490751 LARP1BQ659C4 914 aaKnown RBP34.7■■■■□ 3.15
LDB1-204ENST00000490751 SLC27A1Q6PCB7 646 aa34.7■■■■□ 3.15
LDB1-204ENST00000490751 ADHFE1Q8IWW8 467 aa34.7■■■■□ 3.15
LDB1-204ENST00000490751 MRPL43Q8N983 215 aaKnown RBP34.7■■■■□ 3.15
LDB1-204ENST00000490751 PRIMPOLQ96LW4 560 aa34.7■■■■□ 3.15
LDB1-204ENST00000490751 GAD1Q99259 594 aa34.7■■■■□ 3.15
LDB1-204ENST00000490751 ZBP1Q9H171 429 aa34.7■■■■□ 3.15
LDB1-204ENST00000490751 NXF3Q9H4D5 531 aaKnown RBP34.7■■■■□ 3.15
LDB1-204ENST00000490751 TDRD15B5MCY1 1934 aaKnown RBP34.69■■■■□ 3.14
LDB1-204ENST00000490751 A0A1B0GUA9 196 aa34.69■■■■□ 3.14
LDB1-204ENST00000490751 C2orf71A6NGG8 1288 aa34.69■■■■□ 3.14
LDB1-204ENST00000490751 NPTXRO95502 500 aa34.69■■■■□ 3.14
LDB1-204ENST00000490751 MLH1P40692 756 aa34.69■■■■□ 3.14
LDB1-204ENST00000490751 NAMPTP43490 491 aa34.69■■■■□ 3.14
LDB1-204ENST00000490751 KCNC3Q14003 757 aa34.69■■■■□ 3.14
LDB1-204ENST00000490751 BMS1Q14692 1282 aaKnown RBP34.69■■■■□ 3.14
LDB1-204ENST00000490751 DDX53Q86TM3 631 aaKnown RBP34.69■■■■□ 3.14
LDB1-204ENST00000490751 HACE1Q8IYU2 909 aa34.69■■■■□ 3.14
LDB1-204ENST00000490751 TMEM175Q9BSA9 504 aa34.69■■■■□ 3.14
LDB1-204ENST00000490751 FZD8Q9H461 694 aa34.69■■■■□ 3.14
LDB1-204ENST00000490751 POLD4Q9HCU8 107 aa34.69■■■■□ 3.14
LDB1-204ENST00000490751 ARL5CA6NH57 179 aa34.68■■■■□ 3.14
LDB1-204ENST00000490751 SRGAP2BP0DMP2 458 aa34.68■■■■□ 3.14
LDB1-204ENST00000490751 PPP2R5AQ15172 486 aa34.68■■■■□ 3.14
LDB1-204ENST00000490751 FAM187BQ17R55 369 aa34.68■■■■□ 3.14
LDB1-204ENST00000490751 LLGL2Q6P1M3 1020 aa34.68■■■■□ 3.14
LDB1-204ENST00000490751 DEPTORQ8TB45 409 aa34.68■■■■□ 3.14
LDB1-204ENST00000490751 E9PMD0 336 aa34.67■■■■□ 3.14
LDB1-204ENST00000490751 INPPL1O15357 1258 aa34.67■■■■□ 3.14
LDB1-204ENST00000490751 TMEM184AQ6ZMB5 413 aa34.67■■■■□ 3.14
LDB1-204ENST00000490751 ZFP42Q96MM3 310 aa34.67■■■■□ 3.14
LDB1-204ENST00000490751 MMTAG2Q9BU76 263 aaKnown RBP34.67■■■■□ 3.14
LDB1-204ENST00000490751 C1QTNF1Q9BXJ1 281 aa34.67■■■■□ 3.14
LDB1-204ENST00000490751 DNM3Q9UQ16 869 aa34.67■■■■□ 3.14
LDB1-204ENST00000490751 C19orf67A6NJJ6 358 aa34.66■■■■□ 3.14
LDB1-204ENST00000490751 CXCL14O95715 111 aa34.66■■■■□ 3.14
LDB1-204ENST00000490751 ALDH2P05091 517 aa34.66■■■■□ 3.14
LDB1-204ENST00000490751 MAPK6Q16659 721 aa34.66■■■■□ 3.14
LDB1-204ENST00000490751 AUTS2Q8WXX7 1259 aa34.66■■■■□ 3.14
LDB1-204ENST00000490751 KIFAP3Q92845 792 aa34.66■■■■□ 3.14
LDB1-204ENST00000490751 IFT74Q96LB3 600 aa34.66■■■■□ 3.14
LDB1-204ENST00000490751 FAN1Q9Y2M0 1017 aa34.66■■■■□ 3.14
LDB1-204ENST00000490751 GIT1Q9Y2X7 761 aa34.66■■■■□ 3.14
LDB1-204ENST00000490751 USP15Q9Y4E8 981 aaPredicted RBP34.66■■■■□ 3.14
LDB1-204ENST00000490751 C5orf42Q9H799 3197 aa34.66■■■■□ 3.14
LDB1-204ENST00000490751 TTLL13PA6NNM8 815 aa34.65■■■■□ 3.14
LDB1-204ENST00000490751 PRKCBP05771 671 aa34.65■■■■□ 3.14
LDB1-204ENST00000490751 CTSAP10619 480 aa34.65■■■■□ 3.14
LDB1-204ENST00000490751 AKAP5P24588 427 aa34.65■■■■□ 3.14
LDB1-204ENST00000490751 SCNN1GP51170 649 aa34.65■■■■□ 3.14
LDB1-204ENST00000490751 CUL4AQ13619 759 aa34.65■■■■□ 3.14
LDB1-204ENST00000490751 POP1Q99575 1024 aaKnown RBP34.65■■■■□ 3.14
LDB1-204ENST00000490751 KIFC3Q9BVG8 833 aa34.65■■■■□ 3.14
LDB1-204ENST00000490751 VN1R3Q9BXE9 311 aa34.65■■■■□ 3.14
LDB1-204ENST00000490751 BACH2Q9BYV9 841 aa34.65■■■■□ 3.14
LDB1-204ENST00000490751 CCDC113Q9H0I3 377 aa34.65■■■■□ 3.14
LDB1-204ENST00000490751 MIOSQ9NXC5 875 aa34.65■■■■□ 3.14
LDB1-204ENST00000490751 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP34.64■■■■□ 3.14
LDB1-204ENST00000490751 NRP1O14786 923 aa34.64■■■■□ 3.14
LDB1-204ENST00000490751 LIG1P18858 919 aa34.64■■■■□ 3.14
LDB1-204ENST00000490751 PRPF4BQ13523 1007 aaKnown RBP34.64■■■■□ 3.14
LDB1-204ENST00000490751 TMEM132AQ24JP5 1023 aa34.64■■■■□ 3.14
LDB1-204ENST00000490751 ANKRD54Q6NXT1 300 aa34.64■■■■□ 3.14
LDB1-204ENST00000490751 VWA3AA6NCI4 1184 aa34.63■■■■□ 3.13
LDB1-204ENST00000490751 N4BP3O15049 544 aa34.63■■■■□ 3.13
LDB1-204ENST00000490751 ZRSR1Q15695 479 aaKnown RBP34.63■■■■□ 3.13
LDB1-204ENST00000490751 KCNK18Q7Z418 384 aa34.63■■■■□ 3.13
LDB1-204ENST00000490751 COLGALT2Q8IYK4 626 aa34.63■■■■□ 3.13
LDB1-204ENST00000490751 PDZD7Q9H5P4 517 aa34.63■■■■□ 3.13
LDB1-204ENST00000490751 PRG3Q9Y2Y8 225 aaPredicted RBP34.63■■■■□ 3.13
LDB1-204ENST00000490751 HCFC2Q9Y5Z7 792 aa34.63■■■■□ 3.13
LDB1-204ENST00000490751 PI4K2BG5E9Z4 385 aa34.62■■■■□ 3.13
LDB1-204ENST00000490751 ACKR2O00590 384 aa34.62■■■■□ 3.13
LDB1-204ENST00000490751 CLASP2O75122 1294 aaKnown RBP34.62■■■■□ 3.13
LDB1-204ENST00000490751 EDN1P05305 212 aa34.62■■■■□ 3.13
LDB1-204ENST00000490751 OR1G1P47890 313 aa34.62■■■■□ 3.13
LDB1-204ENST00000490751 DSC1Q08554 894 aa34.62■■■■□ 3.13
LDB1-204ENST00000490751 CASP10Q92851 521 aa34.62■■■■□ 3.13
LDB1-204ENST00000490751 PARP2Q9UGN5 583 aa34.62■■■■□ 3.13
LDB1-204ENST00000490751 USP20Q9Y2K6 914 aa34.62■■■■□ 3.13
LDB1-204ENST00000490751 IRAK3Q9Y616 596 aa34.62■■■■□ 3.13
LDB1-204ENST00000490751 GIT2Q14161 759 aa34.61■■■■□ 3.13
LDB1-204ENST00000490751 ARL6IP4Q66PJ3 421 aaKnown RBP34.61■■■■□ 3.13
LDB1-204ENST00000490751 TMEM87AQ8NBN3 555 aa34.61■■■■□ 3.13
LDB1-204ENST00000490751 MARCH5Q9NX47 278 aa34.61■■■■□ 3.13
LDB1-204ENST00000490751 KLK14Q9P0G3 267 aa34.61■■■■□ 3.13
LDB1-204ENST00000490751 STK39Q9UEW8 545 aa34.61■■■■□ 3.13
LDB1-204ENST00000490751 ZMYM2Q9UBW7 1377 aa34.61■■■■□ 3.13
LDB1-204ENST00000490751 SYCE2Q6PIF2 218 aa34.6■■■■□ 3.13
LDB1-204ENST00000490751 GSTCDQ8NEC7 633 aa34.6■■■■□ 3.13
LDB1-204ENST00000490751 PNMA5Q96PV4 448 aa34.6■■■■□ 3.13
LDB1-204ENST00000490751 RUSC1Q9BVN2 902 aa34.6■■■■□ 3.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms