RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 TBC1D10AQ9BXI6 508 aa5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 EIF2AQ9BY44 585 aaKnown RBP5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 RBCK1Q9BYM8 510 aa5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 EDEM3Q9BZQ6 932 aa5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 ZMYND12Q9H0C1 365 aa5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 DHX36Q9H2U1 1008 aaKnown RBP5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 PABPC3Q9H361 631 aaKnown RBP5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 DENND2DQ9H6A0 471 aaPredicted RBP5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 TIMMDC1Q9NPL8 285 aa5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 COPRSQ9NQ92 184 aa5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 CYLDQ9NQC7 956 aa5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 INIPQ9NRY2 104 aa5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 STK32BQ9NY57 414 aa5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 PTTG2Q9NZH5 202 aa5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 BTBD7Q9P203 1132 aa5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 ZNF212Q9UDV6 495 aa5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 UTP11Q9Y3A2 253 aaKnown RBP5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 CTDP1Q9Y5B0 961 aaPredicted RBP5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 USH1CQ9Y6N9 552 aa5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 FPGT-TNNI3KV9GXZ4 949 aa5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 SOS2Q07890 1332 aaPredicted RBP5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 MRC1P22897 1456 aa5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 TLDC2A0PJX2 215 aa5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 CCDC162PA2VCL2 907 aa5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 TRIM75PA6NK02 468 aa5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 H0Y3Z8 333 aa5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 GRM8O00222 908 aa5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 TNFRSF10BO14763 440 aa5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 MAPK13O15264 365 aa5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 BUB1O43683 1085 aa5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 ENTPD5O75356 428 aa5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 RPN1P04843 607 aaKnown RBP5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 LDHBP07195 334 aaKnown RBP5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 ZFYP08048 801 aaPredicted RBP5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 PIM1P11309 404 aaPredicted RBP5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 PTPN4P29074 926 aa5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 RGS2P41220 211 aa5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 IFNAR2P48551 515 aa5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 ACADVLP49748 655 aa5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 NEK2P51955 445 aa5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 PMS2P54278 862 aa5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 EPHA4P54764 986 aa5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 GDF10P55107 478 aa5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 MTTPP55157 894 aa5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 EHHADHQ08426 723 aa5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 PPP2R5EQ16537 467 aa5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 INF2Q27J81 1249 aa5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 WDR72Q3MJ13 1102 aa5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 KHDC1Q4VXA5 237 aaKnown RBP5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 PKDCCQ504Y2 493 aa5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 ZCWPW2Q504Y3 356 aa5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 PDCD4Q53EL6 469 aaKnown RBP5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 ZC2HC1CQ53FD0 456 aaPredicted RBP5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 SYDE2Q5VT97 1194 aa5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 TCERG1LQ5VWI1 586 aa5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 DENND2CQ68D51 928 aa5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 THOC7Q6I9Y2 204 aaKnown RBP5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 GRAMD4Q6IC98 578 aa5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 MFSD5Q6N075 450 aa5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 DUS1LQ6P1R4 473 aaKnown RBP5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 LRRC74BQ6ZQY2 392 aa5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 C4orf50Q6ZRC1 276 aa5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 INTS8Q75QN2 995 aaKnown RBP5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 ECHDC2Q86YB7 292 aa5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 IL17REQ8NFR9 667 aa5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 DEPTORQ8TB45 409 aa5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 ABTB1Q969K4 478 aaPredicted RBP5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 MPP4Q96JB8 637 aa5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 ZNF184Q99676 751 aaPredicted RBP5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 HNRNPABQ99729 332 aaKnown RBP5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 TUBB6Q9BUF5 446 aa5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 ROPN1BQ9BZX4 212 aaPredicted RBP5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 SLC6A16Q9GZN6 736 aa5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 AZI2Q9H6S1 392 aa5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 NRDE2Q9H7Z3 1164 aa5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 ROPN1Q9HAT0 212 aaPredicted RBP5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 TBC1D7Q9P0N9 293 aa5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 ANGEL1Q9UNK9 670 aaKnown RBP5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 NR2E3Q9Y5X4 410 aa5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 USP3Q9Y6I4 520 aa5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 MAP3K19Q56UN5 1328 aa5.11□□□□□ -1.59
SNRNP40-206ENST00000489853 hCG_2014768A0A024R1R8 64 aa5.1□□□□□ -1.59
SNRNP40-206ENST00000489853 KANSL1LA0AUZ9 987 aa5.1□□□□□ -1.59
SNRNP40-206ENST00000489853 BTNL10A8MVZ5 291 aa5.1□□□□□ -1.59
SNRNP40-206ENST00000489853 PSMA7O14818 248 aa5.1□□□□□ -1.59
SNRNP40-206ENST00000489853 SCAMP3O14828 347 aaKnown RBP5.1□□□□□ -1.59
SNRNP40-206ENST00000489853 ZBTB43O43298 467 aa5.1□□□□□ -1.59
SNRNP40-206ENST00000489853 GDF9O60383 454 aa5.1□□□□□ -1.59
SNRNP40-206ENST00000489853 FTCDO95954 541 aa5.1□□□□□ -1.59
SNRNP40-206ENST00000489853 SPATA31D3P0C874 917 aa5.1□□□□□ -1.59
SNRNP40-206ENST00000489853 IFNAR1P17181 557 aa5.1□□□□□ -1.59
SNRNP40-206ENST00000489853 NPR3P17342 541 aa5.1□□□□□ -1.59
SNRNP40-206ENST00000489853 FUT4P22083 530 aa5.1□□□□□ -1.59
SNRNP40-206ENST00000489853 IGFBP4P22692 258 aa5.1□□□□□ -1.59
SNRNP40-206ENST00000489853 SERPINB3P29508 390 aa5.1□□□□□ -1.59
SNRNP40-206ENST00000489853 TNNI2P48788 182 aa5.1□□□□□ -1.59
SNRNP40-206ENST00000489853 YARSP54577 528 aaKnown RBP5.1□□□□□ -1.59
SNRNP40-206ENST00000489853 DRG2P55039 364 aaKnown RBP5.1□□□□□ -1.59
SNRNP40-206ENST00000489853 GEMIN4P57678 1058 aaKnown RBP5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms