RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 DDX53Q86TM3 631 aaKnown RBP15.28■□□□□ 0.04
SPTLC1-207ENST00000488921 SMG8Q8ND04 991 aaKnown RBP15.28■□□□□ 0.04
SPTLC1-207ENST00000488921 KIFAP3Q92845 792 aa15.28■□□□□ 0.04
SPTLC1-207ENST00000488921 IFT74Q96LB3 600 aa15.28■□□□□ 0.04
SPTLC1-207ENST00000488921 EIF2AQ9BY44 585 aaKnown RBP15.28■□□□□ 0.04
SPTLC1-207ENST00000488921 ZBP1Q9H171 429 aa15.28■□□□□ 0.04
SPTLC1-207ENST00000488921 BHMT2Q9H2M3 363 aa15.28■□□□□ 0.04
SPTLC1-207ENST00000488921 C5orf42Q9H799 3197 aa15.28■□□□□ 0.04
SPTLC1-207ENST00000488921 HIDE1A8MVS5 230 aa15.27■□□□□ 0.04
SPTLC1-207ENST00000488921 INPPL1O15357 1258 aa15.27■□□□□ 0.04
SPTLC1-207ENST00000488921 MAPK6Q16659 721 aa15.27■□□□□ 0.04
SPTLC1-207ENST00000488921 FAM187BQ17R55 369 aa15.27■□□□□ 0.04
SPTLC1-207ENST00000488921 TMEM132AQ24JP5 1023 aa15.27■□□□□ 0.04
SPTLC1-207ENST00000488921 VPS52Q8N1B4 723 aa15.27■□□□□ 0.04
SPTLC1-207ENST00000488921 MRPL43Q8N983 215 aaKnown RBP15.27■□□□□ 0.04
SPTLC1-207ENST00000488921 TMEM87AQ8NBN3 555 aa15.27■□□□□ 0.04
SPTLC1-207ENST00000488921 CASP10Q92851 521 aa15.27■□□□□ 0.04
SPTLC1-207ENST00000488921 CD320Q9NPF0 282 aa15.27■□□□□ 0.04
SPTLC1-207ENST00000488921 DDX19AQ9NUU7 478 aaKnown RBP15.27■□□□□ 0.04
SPTLC1-207ENST00000488921 DNAJB4Q9UDY4 337 aa15.27■□□□□ 0.04
SPTLC1-207ENST00000488921 KIAA1024Q9UPX6 916 aa15.27■□□□□ 0.04
SPTLC1-207ENST00000488921 DNM3Q9UQ16 869 aa15.27■□□□□ 0.04
SPTLC1-207ENST00000488921 GIT1Q9Y2X7 761 aa15.27■□□□□ 0.04
SPTLC1-207ENST00000488921 A0A1B0GUA9 196 aa15.26■□□□□ 0.03
SPTLC1-207ENST00000488921 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.26■□□□□ 0.03
SPTLC1-207ENST00000488921 C2orf71A6NGG8 1288 aa15.26■□□□□ 0.03
SPTLC1-207ENST00000488921 ARL5CA6NH57 179 aa15.26■□□□□ 0.03
SPTLC1-207ENST00000488921 C19orf67A6NJJ6 358 aa15.26■□□□□ 0.03
SPTLC1-207ENST00000488921 N4BP3O15049 544 aa15.26■□□□□ 0.03
SPTLC1-207ENST00000488921 B4GALT5O43286 388 aa15.26■□□□□ 0.03
SPTLC1-207ENST00000488921 NR1I2O75469 434 aa15.26■□□□□ 0.03
SPTLC1-207ENST00000488921 NPTXRO95502 500 aa15.26■□□□□ 0.03
SPTLC1-207ENST00000488921 POMCP01189 267 aa15.26■□□□□ 0.03
SPTLC1-207ENST00000488921 ALDH2P05091 517 aa15.26■□□□□ 0.03
SPTLC1-207ENST00000488921 CTSAP10619 480 aa15.26■□□□□ 0.03
SPTLC1-207ENST00000488921 HOXB8P17481 243 aaPredicted RBP15.26■□□□□ 0.03
SPTLC1-207ENST00000488921 MLH1P40692 756 aa15.26■□□□□ 0.03
SPTLC1-207ENST00000488921 SLC11A1P49279 550 aa15.26■□□□□ 0.03
SPTLC1-207ENST00000488921 ATP2C1P98194 919 aaPredicted RBP15.26■□□□□ 0.03
SPTLC1-207ENST00000488921 KCNC3Q14003 757 aa15.26■□□□□ 0.03
SPTLC1-207ENST00000488921 LARP1BQ659C4 914 aaKnown RBP15.26■□□□□ 0.03
SPTLC1-207ENST00000488921 TMEM173Q86WV6 379 aaPredicted RBP15.26■□□□□ 0.03
SPTLC1-207ENST00000488921 ZNF280BQ86YH2 543 aa15.26■□□□□ 0.03
SPTLC1-207ENST00000488921 KCTD17Q8N5Z5 321 aa15.26■□□□□ 0.03
SPTLC1-207ENST00000488921 DEPTORQ8TB45 409 aa15.26■□□□□ 0.03
SPTLC1-207ENST00000488921 ADPGKQ9BRR6 497 aa15.26■□□□□ 0.03
SPTLC1-207ENST00000488921 FZD8Q9H461 694 aa15.26■□□□□ 0.03
SPTLC1-207ENST00000488921 NXF3Q9H4D5 531 aaKnown RBP15.26■□□□□ 0.03
SPTLC1-207ENST00000488921 FAN1Q9Y2M0 1017 aa15.26■□□□□ 0.03
SPTLC1-207ENST00000488921 IRAK3Q9Y616 596 aa15.26■□□□□ 0.03
SPTLC1-207ENST00000488921 PHLPP2Q6ZVD8 1323 aa15.25■□□□□ 0.03
SPTLC1-207ENST00000488921 PI4K2BG5E9Z4 385 aa15.25■□□□□ 0.03
SPTLC1-207ENST00000488921 DDHD2O94830 711 aa15.25■□□□□ 0.03
SPTLC1-207ENST00000488921 CXCL14O95715 111 aa15.25■□□□□ 0.03
SPTLC1-207ENST00000488921 PRKCBP05771 671 aa15.25■□□□□ 0.03
SPTLC1-207ENST00000488921 ALADP13716 330 aa15.25■□□□□ 0.03
SPTLC1-207ENST00000488921 KCNA4P22459 653 aa15.25■□□□□ 0.03
SPTLC1-207ENST00000488921 EFNA5P52803 228 aa15.25■□□□□ 0.03
SPTLC1-207ENST00000488921 PRPF4BQ13523 1007 aaKnown RBP15.25■□□□□ 0.03
SPTLC1-207ENST00000488921 ECM1Q16610 540 aa15.25■□□□□ 0.03
SPTLC1-207ENST00000488921 ARL6IP4Q66PJ3 421 aaKnown RBP15.25■□□□□ 0.03
SPTLC1-207ENST00000488921 ANKRD54Q6NXT1 300 aa15.25■□□□□ 0.03
SPTLC1-207ENST00000488921 LLGL2Q6P1M3 1020 aa15.25■□□□□ 0.03
SPTLC1-207ENST00000488921 VN1R2Q8NFZ6 395 aa15.25■□□□□ 0.03
SPTLC1-207ENST00000488921 RPS6KC1Q96S38 1066 aa15.25■□□□□ 0.03
SPTLC1-207ENST00000488921 GAD1Q99259 594 aa15.25■□□□□ 0.03
SPTLC1-207ENST00000488921 APOL6Q9BWW8 343 aa15.25■□□□□ 0.03
SPTLC1-207ENST00000488921 USP15Q9Y4E8 981 aaPredicted RBP15.25■□□□□ 0.03
SPTLC1-207ENST00000488921 HES2Q9Y543 173 aa15.25■□□□□ 0.03
SPTLC1-207ENST00000488921 ACKR2O00590 384 aa15.24■□□□□ 0.03
SPTLC1-207ENST00000488921 NRP1O14786 923 aa15.24■□□□□ 0.03
SPTLC1-207ENST00000488921 B4GALT3O60512 393 aa15.24■□□□□ 0.03
SPTLC1-207ENST00000488921 BMP15O95972 392 aa15.24■□□□□ 0.03
SPTLC1-207ENST00000488921 SCNN1GP51170 649 aa15.24■□□□□ 0.03
SPTLC1-207ENST00000488921 GRIK3Q13003 919 aa15.24■□□□□ 0.03
SPTLC1-207ENST00000488921 TPRNQ4KMQ1 711 aa15.24■□□□□ 0.03
SPTLC1-207ENST00000488921 BRAPQ7Z569 592 aa15.24■□□□□ 0.03
SPTLC1-207ENST00000488921 APBB1IPQ7Z5R6 666 aaPredicted RBP15.24■□□□□ 0.03
SPTLC1-207ENST00000488921 BCL7CQ8WUZ0 217 aaPredicted RBP15.24■□□□□ 0.03
SPTLC1-207ENST00000488921 BSNDQ8WZ55 320 aa15.24■□□□□ 0.03
SPTLC1-207ENST00000488921 CDK5RAP3Q96JB5 506 aa15.24■□□□□ 0.03
SPTLC1-207ENST00000488921 DRC1Q96MC2 740 aa15.24■□□□□ 0.03
SPTLC1-207ENST00000488921 TIPINQ9BVW5 301 aa15.24■□□□□ 0.03
SPTLC1-207ENST00000488921 CCDC113Q9H0I3 377 aa15.24■□□□□ 0.03
SPTLC1-207ENST00000488921 NT5C3AQ9H0P0 336 aa15.24■□□□□ 0.03
SPTLC1-207ENST00000488921 EPHX3Q9H6B9 360 aa15.24■□□□□ 0.03
SPTLC1-207ENST00000488921 DZANK1Q9NVP4 752 aa15.24■□□□□ 0.03
SPTLC1-207ENST00000488921 SSX2IPQ9Y2D8 614 aa15.24■□□□□ 0.03
SPTLC1-207ENST00000488921 HCFC2Q9Y5Z7 792 aa15.24■□□□□ 0.03
SPTLC1-207ENST00000488921 PP2D1A8MPX8 630 aa15.23■□□□□ 0.03
SPTLC1-207ENST00000488921 E9PMD0 336 aa15.23■□□□□ 0.03
SPTLC1-207ENST00000488921 DCXO43602 365 aa15.23■□□□□ 0.03
SPTLC1-207ENST00000488921 PDCP20941 246 aa15.23■□□□□ 0.03
SPTLC1-207ENST00000488921 OR1G1P47890 313 aa15.23■□□□□ 0.03
SPTLC1-207ENST00000488921 AFF1P51825 1210 aaKnown RBP15.23■□□□□ 0.03
SPTLC1-207ENST00000488921 RBM10P98175 930 aaKnown RBP15.23■□□□□ 0.03
SPTLC1-207ENST00000488921 DSC1Q08554 894 aa15.23■□□□□ 0.03
SPTLC1-207ENST00000488921 DMP1Q13316 513 aaPredicted RBP15.23■□□□□ 0.03
SPTLC1-207ENST00000488921 IL17AQ16552 155 aa15.23■□□□□ 0.03
SPTLC1-207ENST00000488921 DCAF4L1Q3SXM0 396 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms