RNA–Protein interactions for RNA: ENST00000488910.1

ATG3-205, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 681 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-205ENST00000488910 ZNF280BQ86YH2 543 aa19.31■□□□□ 0.68
ATG3-205ENST00000488910 IGSF21Q96ID5 467 aa19.31■□□□□ 0.68
ATG3-205ENST00000488910 TMEM175Q9BSA9 504 aa19.31■□□□□ 0.68
ATG3-205ENST00000488910 TIPINQ9BVW5 301 aa19.31■□□□□ 0.68
ATG3-205ENST00000488910 VPS37CA5D8V6 355 aaPredicted RBP19.3■□□□□ 0.68
ATG3-205ENST00000488910 ARL5CA6NH57 179 aa19.3■□□□□ 0.68
ATG3-205ENST00000488910 ACKR2O00590 384 aa19.3■□□□□ 0.68
ATG3-205ENST00000488910 PRPF4BQ13523 1007 aaKnown RBP19.3■□□□□ 0.68
ATG3-205ENST00000488910 SMC1AQ14683 1233 aaKnown RBP19.3■□□□□ 0.68
ATG3-205ENST00000488910 RINT1Q6NUQ1 792 aa19.3■□□□□ 0.68
ATG3-205ENST00000488910 DDX53Q86TM3 631 aaKnown RBP19.3■□□□□ 0.68
ATG3-205ENST00000488910 FAM178BQ8IXR5 827 aa19.3■□□□□ 0.68
ATG3-205ENST00000488910 MRPL43Q8N983 215 aaKnown RBP19.3■□□□□ 0.68
ATG3-205ENST00000488910 MSLNLQ96KJ4 702 aa19.3■□□□□ 0.68
ATG3-205ENST00000488910 GBP3Q9H0R5 595 aa19.3■□□□□ 0.68
ATG3-205ENST00000488910 RNF39Q9H2S5 420 aa19.3■□□□□ 0.68
ATG3-205ENST00000488910 CD207Q9UJ71 328 aa19.3■□□□□ 0.68
ATG3-205ENST00000488910 HES2Q9Y543 173 aa19.3■□□□□ 0.68
ATG3-205ENST00000488910 BDP1A6H8Y1 2624 aa19.3■□□□□ 0.68
ATG3-205ENST00000488910 K7ELQ4 463 aaPredicted RBP19.29■□□□□ 0.68
ATG3-205ENST00000488910 N4BP3O15049 544 aa19.29■□□□□ 0.68
ATG3-205ENST00000488910 PER2O15055 1255 aa19.29■□□□□ 0.68
ATG3-205ENST00000488910 TBX10O75333 385 aa19.29■□□□□ 0.68
ATG3-205ENST00000488910 DDHD2O94830 711 aa19.29■□□□□ 0.68
ATG3-205ENST00000488910 NPTXRO95502 500 aa19.29■□□□□ 0.68
ATG3-205ENST00000488910 POMCP01189 267 aa19.29■□□□□ 0.68
ATG3-205ENST00000488910 PRKCBP05771 671 aa19.29■□□□□ 0.68
ATG3-205ENST00000488910 IL9P15248 144 aa19.29■□□□□ 0.68
ATG3-205ENST00000488910 SLC11A1P49279 550 aa19.29■□□□□ 0.68
ATG3-205ENST00000488910 AFF1P51825 1210 aaKnown RBP19.29■□□□□ 0.68
ATG3-205ENST00000488910 COASYQ13057 564 aa19.29■□□□□ 0.68
ATG3-205ENST00000488910 C1orf186Q6ZWK4 172 aa19.29■□□□□ 0.68
ATG3-205ENST00000488910 DRC1Q96MC2 740 aa19.29■□□□□ 0.68
ATG3-205ENST00000488910 GAD1Q99259 594 aa19.29■□□□□ 0.68
ATG3-205ENST00000488910 CCDC113Q9H0I3 377 aa19.29■□□□□ 0.68
ATG3-205ENST00000488910 C17orf75Q9HAS0 396 aa19.29■□□□□ 0.68
ATG3-205ENST00000488910 CLEC1BQ9P126 229 aa19.29■□□□□ 0.68
ATG3-205ENST00000488910 DNAJB4Q9UDY4 337 aa19.29■□□□□ 0.68
ATG3-205ENST00000488910 PRKAG3Q9UGI9 489 aa19.29■□□□□ 0.68
ATG3-205ENST00000488910 KCNG1Q9UIX4 513 aa19.29■□□□□ 0.68
ATG3-205ENST00000488910 FAN1Q9Y2M0 1017 aa19.29■□□□□ 0.68
ATG3-205ENST00000488910 ZMYM2Q9UBW7 1377 aa19.29■□□□□ 0.68
ATG3-205ENST00000488910 CXCL14O95715 111 aa19.28■□□□□ 0.68
ATG3-205ENST00000488910 SRGAP2BP0DMP2 458 aa19.28■□□□□ 0.68
ATG3-205ENST00000488910 SYT1P21579 422 aa19.28■□□□□ 0.68
ATG3-205ENST00000488910 SMAD4Q13485 552 aaKnown RBP19.28■□□□□ 0.68
ATG3-205ENST00000488910 GIT2Q14161 759 aa19.28■□□□□ 0.68
ATG3-205ENST00000488910 ZRSR1Q15695 479 aaKnown RBP19.28■□□□□ 0.68
ATG3-205ENST00000488910 TMEM184AQ6ZMB5 413 aa19.28■□□□□ 0.68
ATG3-205ENST00000488910 KCNK18Q7Z418 384 aa19.28■□□□□ 0.68
ATG3-205ENST00000488910 VPS52Q8N1B4 723 aa19.28■□□□□ 0.68
ATG3-205ENST00000488910 SYT2Q8N9I0 419 aaPredicted RBP19.28■□□□□ 0.68
ATG3-205ENST00000488910 CDK5RAP3Q96JB5 506 aa19.28■□□□□ 0.68
ATG3-205ENST00000488910 PNMA5Q96PV4 448 aa19.28■□□□□ 0.68
ATG3-205ENST00000488910 NXF3Q9H4D5 531 aaKnown RBP19.28■□□□□ 0.68
ATG3-205ENST00000488910 POLD4Q9HCU8 107 aa19.28■□□□□ 0.68
ATG3-205ENST00000488910 GTF3C3Q9Y5Q9 886 aa19.28■□□□□ 0.68
ATG3-205ENST00000488910 PHLPP2Q6ZVD8 1323 aa19.27■□□□□ 0.68
ATG3-205ENST00000488910 C2orf71A6NGG8 1288 aa19.27■□□□□ 0.68
ATG3-205ENST00000488910 HIDE1A8MVS5 230 aa19.27■□□□□ 0.68
ATG3-205ENST00000488910 K7ERI5 159 aa19.27■□□□□ 0.68
ATG3-205ENST00000488910 MBTPS2O43462 519 aa19.27■□□□□ 0.68
ATG3-205ENST00000488910 HIP1RO75146 1068 aa19.27■□□□□ 0.68
ATG3-205ENST00000488910 GLP2RO95838 553 aa19.27■□□□□ 0.68
ATG3-205ENST00000488910 GUCY2CP25092 1073 aa19.27■□□□□ 0.68
ATG3-205ENST00000488910 LONP1P36776 959 aaKnown RBP19.27■□□□□ 0.68
ATG3-205ENST00000488910 MLH1P40692 756 aa19.27■□□□□ 0.68
ATG3-205ENST00000488910 UBA7P41226 1012 aa19.27■□□□□ 0.68
ATG3-205ENST00000488910 SF3A1Q15459 793 aaKnown RBP19.27■□□□□ 0.68
ATG3-205ENST00000488910 SMAD2Q15796 467 aaKnown RBP19.27■□□□□ 0.68
ATG3-205ENST00000488910 TMEM132AQ24JP5 1023 aa19.27■□□□□ 0.68
ATG3-205ENST00000488910 CABP7Q86V35 215 aa19.27■□□□□ 0.68
ATG3-205ENST00000488910 TMEM173Q86WV6 379 aaPredicted RBP19.27■□□□□ 0.68
ATG3-205ENST00000488910 CDR2LQ86X02 465 aaPredicted RBP19.27■□□□□ 0.68
ATG3-205ENST00000488910 COLGALT2Q8IYK4 626 aa19.27■□□□□ 0.68
ATG3-205ENST00000488910 SNX21Q969T3 373 aa19.27■□□□□ 0.68
ATG3-205ENST00000488910 ADPGKQ9BRR6 497 aa19.27■□□□□ 0.68
ATG3-205ENST00000488910 RUSC1Q9BVN2 902 aa19.27■□□□□ 0.68
ATG3-205ENST00000488910 APOL6Q9BWW8 343 aa19.27■□□□□ 0.68
ATG3-205ENST00000488910 PDZD7Q9H5P4 517 aa19.27■□□□□ 0.68
ATG3-205ENST00000488910 KCND2Q9NZV8 630 aa19.27■□□□□ 0.68
ATG3-205ENST00000488910 PARP2Q9UGN5 583 aa19.27■□□□□ 0.68
ATG3-205ENST00000488910 RBM19Q9Y4C8 960 aaKnown RBP19.27■□□□□ 0.68
ATG3-205ENST00000488910 IRAK3Q9Y616 596 aa19.27■□□□□ 0.68
ATG3-205ENST00000488910 CCDC169A6NNP5 214 aa19.26■□□□□ 0.67
ATG3-205ENST00000488910 NRP1O14786 923 aa19.26■□□□□ 0.67
ATG3-205ENST00000488910 B4GALT3O60512 393 aa19.26■□□□□ 0.67
ATG3-205ENST00000488910 NR1I2O75469 434 aa19.26■□□□□ 0.67
ATG3-205ENST00000488910 CTSAP10619 480 aa19.26■□□□□ 0.67
ATG3-205ENST00000488910 AKAP5P24588 427 aa19.26■□□□□ 0.67
ATG3-205ENST00000488910 NPTX2P47972 431 aa19.26■□□□□ 0.67
ATG3-205ENST00000488910 PEX3P56589 373 aa19.26■□□□□ 0.67
ATG3-205ENST00000488910 DSC1Q08554 894 aa19.26■□□□□ 0.67
ATG3-205ENST00000488910 DMP1Q13316 513 aaPredicted RBP19.26■□□□□ 0.67
ATG3-205ENST00000488910 KCNC3Q14003 757 aa19.26■□□□□ 0.67
ATG3-205ENST00000488910 CLUL1Q15846 466 aa19.26■□□□□ 0.67
ATG3-205ENST00000488910 TMEM119Q4V9L6 283 aa19.26■□□□□ 0.67
ATG3-205ENST00000488910 APBB1IPQ7Z5R6 666 aaPredicted RBP19.26■□□□□ 0.67
ATG3-205ENST00000488910 DAW1Q8N136 415 aa19.26■□□□□ 0.67
ATG3-205ENST00000488910 GJD3Q8N144 294 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms