RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 FBXO25Q8TCJ0 367 aa13.68□□□□□ -0.22
CLIC4-202ENST00000488683 TATDN2Q93075 761 aa13.68□□□□□ -0.22
CLIC4-202ENST00000488683 RIT2Q99578 217 aa13.68□□□□□ -0.22
CLIC4-202ENST00000488683 EHMT1Q9H9B1 1298 aa13.68□□□□□ -0.22
CLIC4-202ENST00000488683 CAND2O75155 1236 aa13.68□□□□□ -0.22
CLIC4-202ENST00000488683 FGFR4P22455 802 aa13.68□□□□□ -0.22
CLIC4-202ENST00000488683 YWHABP31946 246 aaKnown RBP13.68□□□□□ -0.22
CLIC4-202ENST00000488683 MDH1P40925 334 aaKnown RBP13.68□□□□□ -0.22
CLIC4-202ENST00000488683 RPS6P62753 249 aaKnown RBP13.68□□□□□ -0.22
CLIC4-202ENST00000488683 DR1Q01658 176 aa13.68□□□□□ -0.22
CLIC4-202ENST00000488683 MTMR1Q13613 665 aa13.68□□□□□ -0.22
CLIC4-202ENST00000488683 PTGISQ16647 500 aa13.68□□□□□ -0.22
CLIC4-202ENST00000488683 XKR9Q5GH70 373 aa13.68□□□□□ -0.22
CLIC4-202ENST00000488683 PRUNE1Q86TP1 453 aa13.68□□□□□ -0.22
CLIC4-202ENST00000488683 FAM160B2Q86V87 743 aa13.68□□□□□ -0.22
CLIC4-202ENST00000488683 ZNF473Q8WTR7 871 aaKnown RBP13.68□□□□□ -0.22
CLIC4-202ENST00000488683 BSNDQ8WZ55 320 aa13.68□□□□□ -0.22
CLIC4-202ENST00000488683 PWWP2AQ96N64 755 aa13.68□□□□□ -0.22
CLIC4-202ENST00000488683 FEM1BQ9UK73 627 aa13.68□□□□□ -0.22
CLIC4-202ENST00000488683 FER1L6Q2WGJ9 1857 aa13.67□□□□□ -0.22
CLIC4-202ENST00000488683 RPTORQ8N122 1335 aa13.67□□□□□ -0.22
CLIC4-202ENST00000488683 IBSPP21815 317 aaPredicted RBP13.67□□□□□ -0.22
CLIC4-202ENST00000488683 IFT88Q13099 833 aa13.67□□□□□ -0.22
CLIC4-202ENST00000488683 CCDC25Q86WR0 208 aa13.67□□□□□ -0.22
CLIC4-202ENST00000488683 DHX37Q8IY37 1157 aaKnown RBP13.67□□□□□ -0.22
CLIC4-202ENST00000488683 CCT8L2Q96SF2 557 aa13.67□□□□□ -0.22
CLIC4-202ENST00000488683 PGAP2Q9UHJ9 254 aa13.67□□□□□ -0.22
CLIC4-202ENST00000488683 PNMA2Q9UL42 364 aa13.67□□□□□ -0.22
CLIC4-202ENST00000488683 UTP11Q9Y3A2 253 aaKnown RBP13.67□□□□□ -0.22
CLIC4-202ENST00000488683 PHF20L1A8MW92 1017 aa13.67□□□□□ -0.22
CLIC4-202ENST00000488683 O00370 1275 aa13.67□□□□□ -0.22
CLIC4-202ENST00000488683 PLA2G6O60733 806 aa13.67□□□□□ -0.22
CLIC4-202ENST00000488683 ICAM1P05362 532 aa13.67□□□□□ -0.22
CLIC4-202ENST00000488683 NLRP14Q86W24 1093 aa13.67□□□□□ -0.22
CLIC4-202ENST00000488683 CEP350Q5VT06 3117 aa13.66□□□□□ -0.22
CLIC4-202ENST00000488683 GOLGA6L10A6NI86 522 aa13.66□□□□□ -0.22
CLIC4-202ENST00000488683 GJB6O95452 261 aa13.66□□□□□ -0.22
CLIC4-202ENST00000488683 P4HBP07237 508 aaKnown RBP13.66□□□□□ -0.22
CLIC4-202ENST00000488683 CFHP08603 1231 aa13.66□□□□□ -0.22
CLIC4-202ENST00000488683 WNT7BP56706 349 aa13.66□□□□□ -0.22
CLIC4-202ENST00000488683 ADCY1Q08828 1119 aa13.66□□□□□ -0.22
CLIC4-202ENST00000488683 IFFO1Q0D2I5 559 aa13.66□□□□□ -0.22
CLIC4-202ENST00000488683 TTC31Q49AM3 519 aaPredicted RBP13.66□□□□□ -0.22
CLIC4-202ENST00000488683 SEZ6Q53EL9 994 aa13.66□□□□□ -0.22
CLIC4-202ENST00000488683 EIF1ADQ8N9N8 165 aaKnown RBP13.66□□□□□ -0.22
CLIC4-202ENST00000488683 MYCBPAPQ8TBZ2 947 aa13.66□□□□□ -0.22
CLIC4-202ENST00000488683 TAS1R2Q8TE23 839 aa13.66□□□□□ -0.22
CLIC4-202ENST00000488683 ATG4AQ8WYN0 398 aa13.66□□□□□ -0.22
CLIC4-202ENST00000488683 SEC14L1Q92503 715 aa13.66□□□□□ -0.22
CLIC4-202ENST00000488683 MTFR1LQ9H019 292 aa13.66□□□□□ -0.22
CLIC4-202ENST00000488683 SLITRK6Q9H5Y7 841 aa13.66□□□□□ -0.22
CLIC4-202ENST00000488683 AGO4Q9HCK5 861 aaKnown RBP13.66□□□□□ -0.22
CLIC4-202ENST00000488683 ANKRD62A6NC57 917 aa13.66□□□□□ -0.22
CLIC4-202ENST00000488683 WNT10BO00744 389 aa13.66□□□□□ -0.22
CLIC4-202ENST00000488683 VCAM1P19320 739 aa13.66□□□□□ -0.22
CLIC4-202ENST00000488683 VPS41P49754 854 aa13.66□□□□□ -0.22
CLIC4-202ENST00000488683 IFI35P80217 286 aaPredicted RBP13.66□□□□□ -0.22
CLIC4-202ENST00000488683 CYFIP1Q7L576 1253 aa13.66□□□□□ -0.22
CLIC4-202ENST00000488683 TADA2BQ86TJ2 420 aa13.66□□□□□ -0.22
CLIC4-202ENST00000488683 PRELID2Q8N945 189 aa13.66□□□□□ -0.22
CLIC4-202ENST00000488683 SUPT20HQ8NEM7 779 aa13.66□□□□□ -0.22
CLIC4-202ENST00000488683 C1orf54Q8WWF1 131 aa13.66□□□□□ -0.22
CLIC4-202ENST00000488683 RNF25Q96BH1 459 aaPredicted RBP13.66□□□□□ -0.22
CLIC4-202ENST00000488683 DEFB129Q9H1M3 183 aa13.66□□□□□ -0.22
CLIC4-202ENST00000488683 SEMA4AQ9H3S1 761 aa13.66□□□□□ -0.22
CLIC4-202ENST00000488683 LARSQ9P2J5 1176 aaKnown RBP13.66□□□□□ -0.22
CLIC4-202ENST00000488683 TTC7AQ9ULT0 858 aaPredicted RBP13.66□□□□□ -0.22
CLIC4-202ENST00000488683 BCRP11274 1271 aa13.65□□□□□ -0.22
CLIC4-202ENST00000488683 NF2P35240 595 aa13.65□□□□□ -0.22
CLIC4-202ENST00000488683 GJC1P36383 396 aa13.65□□□□□ -0.22
CLIC4-202ENST00000488683 RPL21P46778 160 aaKnown RBP13.65□□□□□ -0.22
CLIC4-202ENST00000488683 MXI1P50539 228 aa13.65□□□□□ -0.22
CLIC4-202ENST00000488683 MTMR2Q13614 643 aa13.65□□□□□ -0.22
CLIC4-202ENST00000488683 SPOPLQ6IQ16 392 aa13.65□□□□□ -0.22
CLIC4-202ENST00000488683 INTS8Q75QN2 995 aaKnown RBP13.65□□□□□ -0.22
CLIC4-202ENST00000488683 JAMLQ86YT9 394 aa13.65□□□□□ -0.22
CLIC4-202ENST00000488683 SYTL5Q8TDW5 730 aaPredicted RBP13.65□□□□□ -0.22
CLIC4-202ENST00000488683 EPS8L1Q8TE68 723 aa13.65□□□□□ -0.22
CLIC4-202ENST00000488683 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.65□□□□□ -0.22
CLIC4-202ENST00000488683 FMO2Q99518 471 aa13.65□□□□□ -0.22
CLIC4-202ENST00000488683 HERPUD2Q9BSE4 406 aa13.65□□□□□ -0.22
CLIC4-202ENST00000488683 TSPYL1Q9H0U9 437 aa13.65□□□□□ -0.22
CLIC4-202ENST00000488683 EPN3Q9H201 632 aa13.65□□□□□ -0.22
CLIC4-202ENST00000488683 EPB41L4BQ9H329 900 aa13.65□□□□□ -0.22
CLIC4-202ENST00000488683 CAPN7Q9Y6W3 813 aa13.65□□□□□ -0.22
CLIC4-202ENST00000488683 ADGRA3Q8IWK6 1321 aa13.65□□□□□ -0.22
CLIC4-202ENST00000488683 PLS3P13797 630 aa13.65□□□□□ -0.22
CLIC4-202ENST00000488683 HMGB2P26583 209 aaKnown RBP13.65□□□□□ -0.22
CLIC4-202ENST00000488683 QARSP47897 775 aaKnown RBP13.65□□□□□ -0.22
CLIC4-202ENST00000488683 RASA3Q14644 834 aa13.65□□□□□ -0.22
CLIC4-202ENST00000488683 EMC10Q5UCC4 262 aa13.65□□□□□ -0.22
CLIC4-202ENST00000488683 PASD1Q8IV76 773 aa13.65□□□□□ -0.22
CLIC4-202ENST00000488683 TEX2Q8IWB9 1127 aa13.65□□□□□ -0.22
CLIC4-202ENST00000488683 XXYLT1Q8NBI6 393 aa13.65□□□□□ -0.22
CLIC4-202ENST00000488683 CCDC26Q8TAB7 109 aa13.65□□□□□ -0.22
CLIC4-202ENST00000488683 POMGNT1Q8WZA1 660 aa13.65□□□□□ -0.22
CLIC4-202ENST00000488683 NUP85Q9BW27 656 aa13.65□□□□□ -0.22
CLIC4-202ENST00000488683 CCDC113Q9H0I3 377 aa13.65□□□□□ -0.22
CLIC4-202ENST00000488683 MLXIPLQ9NP71 852 aa13.65□□□□□ -0.22
CLIC4-202ENST00000488683 DAAM1Q9Y4D1 1078 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms