RNA–Protein interactions for RNA: ENST00000488391.5

LCN2-206, Transcript of lipocalin 2, humanhuman

TSL 2

Gene LCN2, Length 485 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-206ENST00000488391 SLC44A3Q8N4M1 653 aa12.22□□□□□ -0.45
LCN2-206ENST00000488391 EMILIN2Q9BXX0 1053 aa12.22□□□□□ -0.45
LCN2-206ENST00000488391 GCOM2Q9BZD3 368 aaPredicted RBP12.22□□□□□ -0.45
LCN2-206ENST00000488391 GLT8D2Q9H1C3 349 aa12.22□□□□□ -0.45
LCN2-206ENST00000488391 CHST12Q9NRB3 414 aa12.22□□□□□ -0.45
LCN2-206ENST00000488391 KCNJ14Q9UNX9 436 aa12.22□□□□□ -0.45
LCN2-206ENST00000488391 DENND4AQ7Z401 1863 aa12.22□□□□□ -0.45
LCN2-206ENST00000488391 A0A087WZ62 844 aa12.21□□□□□ -0.45
LCN2-206ENST00000488391 CCDC195A0A1B0GUA6 201 aa12.21□□□□□ -0.45
LCN2-206ENST00000488391 BTBD18B2RXH4 712 aa12.21□□□□□ -0.45
LCN2-206ENST00000488391 C2CD2LO14523 706 aa12.21□□□□□ -0.45
LCN2-206ENST00000488391 B4GALT3O60512 393 aa12.21□□□□□ -0.45
LCN2-206ENST00000488391 PRPF40AO75400 957 aaKnown RBP12.21□□□□□ -0.45
LCN2-206ENST00000488391 OFD1O75665 1012 aa12.21□□□□□ -0.45
LCN2-206ENST00000488391 YEATS4O95619 227 aa12.21□□□□□ -0.45
LCN2-206ENST00000488391 MBD3O95983 291 aa12.21□□□□□ -0.45
LCN2-206ENST00000488391 DCNP07585 359 aaKnown RBP12.21□□□□□ -0.45
LCN2-206ENST00000488391 GNA11P29992 359 aa12.21□□□□□ -0.45
LCN2-206ENST00000488391 TBC1D8BQ0IIM8 1120 aa12.21□□□□□ -0.45
LCN2-206ENST00000488391 NBR1Q14596 966 aa12.21□□□□□ -0.45
LCN2-206ENST00000488391 PUM1Q14671 1186 aaKnown RBP eCLIP12.21□□□□□ -0.45
LCN2-206ENST00000488391 NPY5RQ15761 445 aa12.21□□□□□ -0.45
LCN2-206ENST00000488391 UGCGQ16739 394 aa12.21□□□□□ -0.45
LCN2-206ENST00000488391 FOXD4L6Q3SYB3 417 aaPredicted RBP12.21□□□□□ -0.45
LCN2-206ENST00000488391 RILPL1Q5EBL4 403 aa12.21□□□□□ -0.45
LCN2-206ENST00000488391 FAM173BQ6P4H8 233 aa12.21□□□□□ -0.45
LCN2-206ENST00000488391 FOXD4L3Q6VB84 417 aaPredicted RBP12.21□□□□□ -0.45
LCN2-206ENST00000488391 BICD2Q8TD16 824 aa12.21□□□□□ -0.45
LCN2-206ENST00000488391 LEO1Q8WVC0 666 aaPredicted RBP12.21□□□□□ -0.45
LCN2-206ENST00000488391 CRYGNQ8WXF5 182 aa12.21□□□□□ -0.45
LCN2-206ENST00000488391 FDXACB1Q9BRP7 624 aaPredicted RBP12.21□□□□□ -0.45
LCN2-206ENST00000488391 ZMYND12Q9H0C1 365 aa12.21□□□□□ -0.45
LCN2-206ENST00000488391 TBC1D17Q9HA65 648 aa12.21□□□□□ -0.45
LCN2-206ENST00000488391 C6orf50Q9HD87 102 aa12.21□□□□□ -0.45
LCN2-206ENST00000488391 DISC1Q9NRI5 854 aa12.21□□□□□ -0.45
LCN2-206ENST00000488391 RCOR1Q9UKL0 485 aa12.21□□□□□ -0.45
LCN2-206ENST00000488391 PCDHA4Q9UN74 947 aa12.21□□□□□ -0.45
LCN2-206ENST00000488391 OTOGLQ3ZCN5 2332 aa12.21□□□□□ -0.46
LCN2-206ENST00000488391 SPTBN2O15020 2390 aa12.2□□□□□ -0.46
LCN2-206ENST00000488391 TCHHQ07283 1943 aa12.2□□□□□ -0.46
LCN2-206ENST00000488391 TRAK2O60296 914 aa12.2□□□□□ -0.46
LCN2-206ENST00000488391 LILRB3O75022 631 aa12.2□□□□□ -0.46
LCN2-206ENST00000488391 KRT37O76014 449 aa12.2□□□□□ -0.46
LCN2-206ENST00000488391 DDHD2O94830 711 aa12.2□□□□□ -0.46
LCN2-206ENST00000488391 ALDH2P05091 517 aa12.2□□□□□ -0.46
LCN2-206ENST00000488391 SP9P0CG40 484 aa12.2□□□□□ -0.46
LCN2-206ENST00000488391 SKIP12755 728 aa12.2□□□□□ -0.46
LCN2-206ENST00000488391 TRAPPC10P48553 1259 aa12.2□□□□□ -0.46
LCN2-206ENST00000488391 NASPP49321 788 aaPredicted RBP12.2□□□□□ -0.46
LCN2-206ENST00000488391 AFF1P51825 1210 aaKnown RBP12.2□□□□□ -0.46
LCN2-206ENST00000488391 UBE2HP62256 183 aa12.2□□□□□ -0.46
LCN2-206ENST00000488391 PRKCEQ02156 737 aa12.2□□□□□ -0.46
LCN2-206ENST00000488391 NONOQ15233 471 aaKnown RBP eCLIP12.2□□□□□ -0.46
LCN2-206ENST00000488391 KLHL40Q2TBA0 621 aa12.2□□□□□ -0.46
LCN2-206ENST00000488391 C15orf39Q6ZRI6 1047 aa12.2□□□□□ -0.46
LCN2-206ENST00000488391 BLIDQ8IZY5 108 aa12.2□□□□□ -0.46
LCN2-206ENST00000488391 ST13P5Q8NFI4 369 aaPredicted RBP12.2□□□□□ -0.46
LCN2-206ENST00000488391 TNFRSF25Q93038 417 aa12.2□□□□□ -0.46
LCN2-206ENST00000488391 CHAMP1Q96JM3 812 aa12.2□□□□□ -0.46
LCN2-206ENST00000488391 SPATA32Q96LK8 384 aa12.2□□□□□ -0.46
LCN2-206ENST00000488391 MYADMQ96S97 322 aa12.2□□□□□ -0.46
LCN2-206ENST00000488391 SH2D3AQ9BRG2 576 aa12.2□□□□□ -0.46
LCN2-206ENST00000488391 ANP32EQ9BTT0 268 aa12.2□□□□□ -0.46
LCN2-206ENST00000488391 MRPL17Q9NRX2 175 aaKnown RBP12.2□□□□□ -0.46
LCN2-206ENST00000488391 FAM105AQ9NUU6 356 aa12.2□□□□□ -0.46
LCN2-206ENST00000488391 PIN4Q9Y237 131 aaKnown RBP12.2□□□□□ -0.46
LCN2-206ENST00000488391 FAN1Q9Y2M0 1017 aa12.2□□□□□ -0.46
LCN2-206ENST00000488391 MORC2Q9Y6X9 1032 aaPredicted RBP12.2□□□□□ -0.46
LCN2-206ENST00000488391 CARNS1A5YM72 827 aa12.19□□□□□ -0.46
LCN2-206ENST00000488391 TMEM150BA6NC51 233 aa12.19□□□□□ -0.46
LCN2-206ENST00000488391 WDR64B1ANS9 1081 aa12.19□□□□□ -0.46
LCN2-206ENST00000488391 CHMP2AO43633 222 aa12.19□□□□□ -0.46
LCN2-206ENST00000488391 SPATA31D3P0C874 917 aa12.19□□□□□ -0.46
LCN2-206ENST00000488391 SETQ01105 290 aaPredicted RBP12.19□□□□□ -0.46
LCN2-206ENST00000488391 TARBP2Q15633 366 aaKnown RBP12.19□□□□□ -0.46
LCN2-206ENST00000488391 MTERF2Q49AM1 385 aa12.19□□□□□ -0.46
LCN2-206ENST00000488391 SPATA31D4Q6ZUB0 917 aa12.19□□□□□ -0.46
LCN2-206ENST00000488391 TAS1R1Q7RTX1 841 aa12.19□□□□□ -0.46
LCN2-206ENST00000488391 GPR152Q8TDT2 470 aa12.19□□□□□ -0.46
LCN2-206ENST00000488391 RUBCNQ92622 972 aa12.19□□□□□ -0.46
LCN2-206ENST00000488391 FAM193BQ96PV7 902 aaPredicted RBP12.19□□□□□ -0.46
LCN2-206ENST00000488391 USP28Q96RU2 1077 aa12.19□□□□□ -0.46
LCN2-206ENST00000488391 TRAIPQ9BWF2 469 aa12.19□□□□□ -0.46
LCN2-206ENST00000488391 WDR6Q9NNW5 1121 aaKnown RBP12.19□□□□□ -0.46
LCN2-206ENST00000488391 MAN1C1Q9NR34 630 aa12.19□□□□□ -0.46
LCN2-206ENST00000488391 NOL7Q9UMY1 257 aaKnown RBP12.19□□□□□ -0.46
LCN2-206ENST00000488391 SIT1Q9Y3P8 196 aa12.19□□□□□ -0.46
LCN2-206ENST00000488391 GPR179Q6PRD1 2367 aa12.19□□□□□ -0.46
LCN2-206ENST00000488391 EPG5Q9HCE0 2579 aa12.18□□□□□ -0.46
LCN2-206ENST00000488391 M0R2N6 131 aa12.18□□□□□ -0.46
LCN2-206ENST00000488391 NRP1O14786 923 aa12.18□□□□□ -0.46
LCN2-206ENST00000488391 INPPL1O15357 1258 aa12.18□□□□□ -0.46
LCN2-206ENST00000488391 ZNF623O75123 536 aa12.18□□□□□ -0.46
LCN2-206ENST00000488391 RFPL2O75678 378 aa12.18□□□□□ -0.46
LCN2-206ENST00000488391 BMP15O95972 392 aa12.18□□□□□ -0.46
LCN2-206ENST00000488391 SRFP11831 508 aa12.18□□□□□ -0.46
LCN2-206ENST00000488391 SFPQP23246 707 aaKnown RBP eCLIP12.18□□□□□ -0.46
LCN2-206ENST00000488391 DNM2P50570 870 aa12.18□□□□□ -0.46
LCN2-206ENST00000488391 CDC42EP1Q00587 391 aa12.18□□□□□ -0.46
LCN2-206ENST00000488391 NR5A1Q13285 461 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms