RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 JAM2P57087 298 aa10.27□□□□□ -0.77
SF3B1-211ENST00000487698 POU5F1BQ06416 359 aa10.27□□□□□ -0.77
SF3B1-211ENST00000487698 TFDP1Q14186 410 aa10.27□□□□□ -0.77
SF3B1-211ENST00000487698 DNTTIP2Q5QJE6 756 aaKnown RBP10.27□□□□□ -0.77
SF3B1-211ENST00000487698 MARCH8Q5T0T0 291 aa10.27□□□□□ -0.77
SF3B1-211ENST00000487698 SLFN12LQ6IEE8 588 aa10.27□□□□□ -0.77
SF3B1-211ENST00000487698 RHPN2Q8IUC4 686 aa10.27□□□□□ -0.77
SF3B1-211ENST00000487698 CCDC170Q8IYT3 715 aa10.27□□□□□ -0.77
SF3B1-211ENST00000487698 ACRBPQ8NEB7 543 aa10.27□□□□□ -0.77
SF3B1-211ENST00000487698 KAT2BQ92831 832 aa10.27□□□□□ -0.77
SF3B1-211ENST00000487698 TARS2Q9BW92 718 aaKnown RBP10.27□□□□□ -0.77
SF3B1-211ENST00000487698 NHEJ1Q9H9Q4 299 aaPredicted RBP10.27□□□□□ -0.77
SF3B1-211ENST00000487698 KIAA1586Q9HCI6 787 aa10.27□□□□□ -0.77
SF3B1-211ENST00000487698 CREBZFQ9NS37 354 aa10.27□□□□□ -0.77
SF3B1-211ENST00000487698 AJAP1Q9UKB5 411 aaPredicted RBP10.27□□□□□ -0.77
SF3B1-211ENST00000487698 USP20Q9Y2K6 914 aa10.27□□□□□ -0.77
SF3B1-211ENST00000487698 A0A0B4J269 797 aa10.27□□□□□ -0.77
SF3B1-211ENST00000487698 TTLL13PA6NNM8 815 aa10.27□□□□□ -0.77
SF3B1-211ENST00000487698 LRRIQ3A6PVS8 624 aaPredicted RBP10.27□□□□□ -0.77
SF3B1-211ENST00000487698 ABLIM1O14639 778 aa10.27□□□□□ -0.77
SF3B1-211ENST00000487698 GJB1P08034 283 aa10.27□□□□□ -0.77
SF3B1-211ENST00000487698 PLEKP08567 350 aaPredicted RBP10.27□□□□□ -0.77
SF3B1-211ENST00000487698 SRGAP2CP0DJJ0 459 aa10.27□□□□□ -0.77
SF3B1-211ENST00000487698 PSMC4P43686 418 aa10.27□□□□□ -0.77
SF3B1-211ENST00000487698 PTENP60484 403 aa10.27□□□□□ -0.77
SF3B1-211ENST00000487698 IGBP1P78318 339 aa10.27□□□□□ -0.77
SF3B1-211ENST00000487698 CAP1Q01518 475 aa10.27□□□□□ -0.77
SF3B1-211ENST00000487698 PPFIA1Q13136 1202 aa10.27□□□□□ -0.77
SF3B1-211ENST00000487698 GRIK4Q16099 956 aa10.27□□□□□ -0.77
SF3B1-211ENST00000487698 DEFB115Q30KQ5 88 aa10.27□□□□□ -0.77
SF3B1-211ENST00000487698 EPC2Q52LR7 807 aa10.27□□□□□ -0.77
SF3B1-211ENST00000487698 MTHFD1LQ6UB35 978 aa10.27□□□□□ -0.77
SF3B1-211ENST00000487698 IFNLR1Q8IU57 520 aaPredicted RBP10.27□□□□□ -0.77
SF3B1-211ENST00000487698 ZBTB8OSQ8IWT0 167 aa10.27□□□□□ -0.77
SF3B1-211ENST00000487698 METTL13Q8N6R0 699 aa10.27□□□□□ -0.77
SF3B1-211ENST00000487698 TRPV1Q8NER1 839 aa10.27□□□□□ -0.77
SF3B1-211ENST00000487698 CFHR5Q9BXR6 569 aa10.27□□□□□ -0.77
SF3B1-211ENST00000487698 TMEM117Q9H0C3 514 aa10.27□□□□□ -0.77
SF3B1-211ENST00000487698 INTS2Q9H0H0 1204 aaKnown RBP10.27□□□□□ -0.77
SF3B1-211ENST00000487698 AIPL1Q9NZN9 384 aa10.27□□□□□ -0.77
SF3B1-211ENST00000487698 AGO2Q9UKV8 859 aaKnown RBP10.27□□□□□ -0.77
SF3B1-211ENST00000487698 GABRQQ9UN88 632 aa10.27□□□□□ -0.77
SF3B1-211ENST00000487698 DAAM1Q9Y4D1 1078 aa10.27□□□□□ -0.77
SF3B1-211ENST00000487698 SCN10AQ9Y5Y9 1956 aa10.26□□□□□ -0.77
SF3B1-211ENST00000487698 A0A0U1RQJ8 604 aa10.26□□□□□ -0.77
SF3B1-211ENST00000487698 EIF3CLB5ME19 914 aaKnown RBP10.26□□□□□ -0.77
SF3B1-211ENST00000487698 FAM189A1O60320 539 aa10.26□□□□□ -0.77
SF3B1-211ENST00000487698 LCA5LO95447 670 aa10.26□□□□□ -0.77
SF3B1-211ENST00000487698 TUBB4AP04350 444 aa10.26□□□□□ -0.77
SF3B1-211ENST00000487698 PRKCBP05771 671 aa10.26□□□□□ -0.77
SF3B1-211ENST00000487698 CYBAP13498 195 aa10.26□□□□□ -0.77
SF3B1-211ENST00000487698 GCLMP48507 274 aa10.26□□□□□ -0.77
SF3B1-211ENST00000487698 MXI1P50539 228 aa10.26□□□□□ -0.77
SF3B1-211ENST00000487698 CLDN10P78369 228 aa10.26□□□□□ -0.77
SF3B1-211ENST00000487698 MBTD1Q05BQ5 628 aa10.26□□□□□ -0.77
SF3B1-211ENST00000487698 MAPK8IP2Q13387 824 aaPredicted RBP10.26□□□□□ -0.77
SF3B1-211ENST00000487698 ASTE1Q2TB18 679 aaPredicted RBP10.26□□□□□ -0.77
SF3B1-211ENST00000487698 SFMBT2Q5VUG0 894 aa10.26□□□□□ -0.77
SF3B1-211ENST00000487698 IQCEQ6IPM2 695 aa10.26□□□□□ -0.77
SF3B1-211ENST00000487698 CRELD2Q6UXH1 353 aaPredicted RBP10.26□□□□□ -0.77
SF3B1-211ENST00000487698 ATRIPQ8WXE1 791 aa10.26□□□□□ -0.77
SF3B1-211ENST00000487698 TRIB2Q92519 343 aa10.26□□□□□ -0.77
SF3B1-211ENST00000487698 ZBTB45Q96K62 511 aaPredicted RBP10.26□□□□□ -0.77
SF3B1-211ENST00000487698 EIF3CQ99613 913 aaKnown RBP10.26□□□□□ -0.77
SF3B1-211ENST00000487698 FAM213AQ9BRX8 229 aa10.26□□□□□ -0.77
SF3B1-211ENST00000487698 MRPL4Q9BYD3 311 aaKnown RBP10.26□□□□□ -0.77
SF3B1-211ENST00000487698 FZD8Q9H461 694 aa10.26□□□□□ -0.77
SF3B1-211ENST00000487698 IFT122Q9HBG6 1241 aa10.26□□□□□ -0.77
SF3B1-211ENST00000487698 SSU72P8A0A1W2PR75 194 aa10.25□□□□□ -0.77
SF3B1-211ENST00000487698 ZNF233A6NK53 670 aa10.25□□□□□ -0.77
SF3B1-211ENST00000487698 HAS3O00219 553 aa10.25□□□□□ -0.77
SF3B1-211ENST00000487698 TOM1L1O75674 476 aa10.25□□□□□ -0.77
SF3B1-211ENST00000487698 AKR1A1P14550 325 aa10.25□□□□□ -0.77
SF3B1-211ENST00000487698 PROZP22891 400 aa10.25□□□□□ -0.77
SF3B1-211ENST00000487698 GTF2H1P32780 548 aa10.25□□□□□ -0.77
SF3B1-211ENST00000487698 CYLC1P35663 651 aaPredicted RBP10.25□□□□□ -0.77
SF3B1-211ENST00000487698 CPT1AP50416 773 aa10.25□□□□□ -0.77
SF3B1-211ENST00000487698 NLRP11P59045 1033 aaKnown RBP10.25□□□□□ -0.77
SF3B1-211ENST00000487698 IRX5P78411 483 aaPredicted RBP10.25□□□□□ -0.77
SF3B1-211ENST00000487698 RAPGEF1Q13905 1077 aa10.25□□□□□ -0.77
SF3B1-211ENST00000487698 HSP90AA2PQ14568 343 aaPredicted RBP10.25□□□□□ -0.77
SF3B1-211ENST00000487698 PSMD6Q15008 389 aa10.25□□□□□ -0.77
SF3B1-211ENST00000487698 MAPK6Q16659 721 aa10.25□□□□□ -0.77
SF3B1-211ENST00000487698 GJB7Q6PEY0 223 aa10.25□□□□□ -0.77
SF3B1-211ENST00000487698 USP37Q86T82 979 aa10.25□□□□□ -0.77
SF3B1-211ENST00000487698 EHBP1Q8NDI1 1231 aa10.25□□□□□ -0.77
SF3B1-211ENST00000487698 LMBR1Q8WVP7 490 aa10.25□□□□□ -0.77
SF3B1-211ENST00000487698 NLRP4Q96MN2 994 aa10.25□□□□□ -0.77
SF3B1-211ENST00000487698 ACO2Q99798 780 aaKnown RBP10.25□□□□□ -0.77
SF3B1-211ENST00000487698 MINDY3Q9H8M7 445 aa10.25□□□□□ -0.77
SF3B1-211ENST00000487698 TMEM8AQ9HCN3 771 aa10.25□□□□□ -0.77
SF3B1-211ENST00000487698 ANKFY1Q9P2R3 1169 aa10.25□□□□□ -0.77
SF3B1-211ENST00000487698 APEX2Q9UBZ4 518 aa10.25□□□□□ -0.77
SF3B1-211ENST00000487698 COQ4Q9Y3A0 265 aa10.25□□□□□ -0.77
SF3B1-211ENST00000487698 RRN3P2A6NIE6 340 aa10.25□□□□□ -0.77
SF3B1-211ENST00000487698 ACKR2O00590 384 aa10.25□□□□□ -0.77
SF3B1-211ENST00000487698 ZNF263O14978 683 aa10.25□□□□□ -0.77
SF3B1-211ENST00000487698 FANCGO15287 622 aa10.25□□□□□ -0.77
SF3B1-211ENST00000487698 LDHAP00338 332 aaKnown RBP10.25□□□□□ -0.77
SF3B1-211ENST00000487698 SERPING1P05155 500 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms