RNA–Protein interactions for RNA: ENST00000487427.5

ITSN1-229, Transcript of intersectin 1, humanhuman

TSL 1 (best)

Gene ITSN1, Length 805 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-229ENST00000487427 SNX29Q8TEQ0 813 aa13.78□□□□□ -0.2
ITSN1-229ENST00000487427 IGSF21Q96ID5 467 aa13.78□□□□□ -0.2
ITSN1-229ENST00000487427 PRIMPOLQ96LW4 560 aa13.78□□□□□ -0.2
ITSN1-229ENST00000487427 FAM193BQ96PV7 902 aaPredicted RBP13.78□□□□□ -0.2
ITSN1-229ENST00000487427 TRIM6Q9C030 488 aaPredicted RBP13.78□□□□□ -0.2
ITSN1-229ENST00000487427 C2orf40Q9H1Z8 148 aa13.78□□□□□ -0.2
ITSN1-229ENST00000487427 BHMT2Q9H2M3 363 aa13.78□□□□□ -0.2
ITSN1-229ENST00000487427 FZD8Q9H461 694 aa13.78□□□□□ -0.2
ITSN1-229ENST00000487427 CD320Q9NPF0 282 aa13.78□□□□□ -0.2
ITSN1-229ENST00000487427 DDX19AQ9NUU7 478 aaKnown RBP13.78□□□□□ -0.2
ITSN1-229ENST00000487427 PRMT7Q9NVM4 692 aaPredicted RBP13.78□□□□□ -0.2
ITSN1-229ENST00000487427 DNM3Q9UQ16 869 aa13.78□□□□□ -0.2
ITSN1-229ENST00000487427 HIDE1A8MVS5 230 aa13.77□□□□□ -0.21
ITSN1-229ENST00000487427 INPPL1O15357 1258 aa13.77□□□□□ -0.21
ITSN1-229ENST00000487427 B4GALT5O43286 388 aa13.77□□□□□ -0.21
ITSN1-229ENST00000487427 DDHD2O94830 711 aa13.77□□□□□ -0.21
ITSN1-229ENST00000487427 CXCL14O95715 111 aa13.77□□□□□ -0.21
ITSN1-229ENST00000487427 GLP2RO95838 553 aa13.77□□□□□ -0.21
ITSN1-229ENST00000487427 NAMPTP43490 491 aa13.77□□□□□ -0.21
ITSN1-229ENST00000487427 ATP2C1P98194 919 aaPredicted RBP13.77□□□□□ -0.21
ITSN1-229ENST00000487427 SMC1AQ14683 1233 aaKnown RBP13.77□□□□□ -0.21
ITSN1-229ENST00000487427 SLC27A1Q6PCB7 646 aa13.77□□□□□ -0.21
ITSN1-229ENST00000487427 TMEM184AQ6ZMB5 413 aa13.77□□□□□ -0.21
ITSN1-229ENST00000487427 ADHFE1Q8IWW8 467 aa13.77□□□□□ -0.21
ITSN1-229ENST00000487427 VPS52Q8N1B4 723 aa13.77□□□□□ -0.21
ITSN1-229ENST00000487427 BSNDQ8WZ55 320 aa13.77□□□□□ -0.21
ITSN1-229ENST00000487427 KIFAP3Q92845 792 aa13.77□□□□□ -0.21
ITSN1-229ENST00000487427 IFT74Q96LB3 600 aa13.77□□□□□ -0.21
ITSN1-229ENST00000487427 C1QTNF1Q9BXJ1 281 aa13.77□□□□□ -0.21
ITSN1-229ENST00000487427 BACH2Q9BYV9 841 aa13.77□□□□□ -0.21
ITSN1-229ENST00000487427 GBP3Q9H0R5 595 aa13.77□□□□□ -0.21
ITSN1-229ENST00000487427 DNAJB4Q9UDY4 337 aa13.77□□□□□ -0.21
ITSN1-229ENST00000487427 DAXXQ9UER7 740 aaPredicted RBP13.77□□□□□ -0.21
ITSN1-229ENST00000487427 STK39Q9UEW8 545 aa13.77□□□□□ -0.21
ITSN1-229ENST00000487427 BARX2Q9UMQ3 279 aaPredicted RBP13.77□□□□□ -0.21
ITSN1-229ENST00000487427 GIT1Q9Y2X7 761 aa13.77□□□□□ -0.21
ITSN1-229ENST00000487427 HES2Q9Y543 173 aa13.77□□□□□ -0.21
ITSN1-229ENST00000487427 C2orf71A6NGG8 1288 aa13.76□□□□□ -0.21
ITSN1-229ENST00000487427 ARL5CA6NH57 179 aa13.76□□□□□ -0.21
ITSN1-229ENST00000487427 PP2D1A8MPX8 630 aa13.76□□□□□ -0.21
ITSN1-229ENST00000487427 POMCP01189 267 aa13.76□□□□□ -0.21
ITSN1-229ENST00000487427 SRGAP2BP0DMP2 458 aa13.76□□□□□ -0.21
ITSN1-229ENST00000487427 PYGBP11216 843 aa13.76□□□□□ -0.21
ITSN1-229ENST00000487427 CDC25AP30304 524 aa13.76□□□□□ -0.21
ITSN1-229ENST00000487427 SSTR3P32745 418 aaPredicted RBP13.76□□□□□ -0.21
ITSN1-229ENST00000487427 SLC11A1P49279 550 aa13.76□□□□□ -0.21
ITSN1-229ENST00000487427 EFNA5P52803 228 aa13.76□□□□□ -0.21
ITSN1-229ENST00000487427 ZP2Q05996 745 aa13.76□□□□□ -0.21
ITSN1-229ENST00000487427 CUL4AQ13619 759 aa13.76□□□□□ -0.21
ITSN1-229ENST00000487427 KCNC3Q14003 757 aa13.76□□□□□ -0.21
ITSN1-229ENST00000487427 MAPK6Q16659 721 aa13.76□□□□□ -0.21
ITSN1-229ENST00000487427 ARL6IP4Q66PJ3 421 aaKnown RBP13.76□□□□□ -0.21
ITSN1-229ENST00000487427 TMEM173Q86WV6 379 aaPredicted RBP13.76□□□□□ -0.21
ITSN1-229ENST00000487427 KCTD17Q8N5Z5 321 aa13.76□□□□□ -0.21
ITSN1-229ENST00000487427 SMRP1Q8NCR6 262 aa13.76□□□□□ -0.21
ITSN1-229ENST00000487427 VN1R2Q8NFZ6 395 aa13.76□□□□□ -0.21
ITSN1-229ENST00000487427 DEPTORQ8TB45 409 aa13.76□□□□□ -0.21
ITSN1-229ENST00000487427 GAD1Q99259 594 aa13.76□□□□□ -0.21
ITSN1-229ENST00000487427 TMEM175Q9BSA9 504 aa13.76□□□□□ -0.21
ITSN1-229ENST00000487427 MMTAG2Q9BU76 263 aaKnown RBP13.76□□□□□ -0.21
ITSN1-229ENST00000487427 FAN1Q9Y2M0 1017 aa13.76□□□□□ -0.21
ITSN1-229ENST00000487427 C19orf67A6NJJ6 358 aa13.75□□□□□ -0.21
ITSN1-229ENST00000487427 ACKR2O00590 384 aa13.75□□□□□ -0.21
ITSN1-229ENST00000487427 B4GALT3O60512 393 aa13.75□□□□□ -0.21
ITSN1-229ENST00000487427 CTSAP10619 480 aa13.75□□□□□ -0.21
ITSN1-229ENST00000487427 RBM10P98175 930 aaKnown RBP13.75□□□□□ -0.21
ITSN1-229ENST00000487427 PRPF4BQ13523 1007 aaKnown RBP13.75□□□□□ -0.21
ITSN1-229ENST00000487427 GIT2Q14161 759 aa13.75□□□□□ -0.21
ITSN1-229ENST00000487427 BRAPQ7Z569 592 aa13.75□□□□□ -0.21
ITSN1-229ENST00000487427 CDR2LQ86X02 465 aaPredicted RBP13.75□□□□□ -0.21
ITSN1-229ENST00000487427 TMEM87AQ8NBN3 555 aa13.75□□□□□ -0.21
ITSN1-229ENST00000487427 POP1Q99575 1024 aaKnown RBP13.75□□□□□ -0.21
ITSN1-229ENST00000487427 ZBP1Q9H171 429 aa13.75□□□□□ -0.21
ITSN1-229ENST00000487427 NXF3Q9H4D5 531 aaKnown RBP13.75□□□□□ -0.21
ITSN1-229ENST00000487427 POLD4Q9HCU8 107 aa13.75□□□□□ -0.21
ITSN1-229ENST00000487427 IRAK3Q9Y616 596 aa13.75□□□□□ -0.21
ITSN1-229ENST00000487427 VWA3AA6NCI4 1184 aa13.74□□□□□ -0.21
ITSN1-229ENST00000487427 E9PMD0 336 aa13.74□□□□□ -0.21
ITSN1-229ENST00000487427 PI4K2BG5E9Z4 385 aa13.74□□□□□ -0.21
ITSN1-229ENST00000487427 NRP1O14786 923 aa13.74□□□□□ -0.21
ITSN1-229ENST00000487427 N4BP3O15049 544 aa13.74□□□□□ -0.21
ITSN1-229ENST00000487427 NPTXRO95502 500 aa13.74□□□□□ -0.21
ITSN1-229ENST00000487427 PRKCBP05771 671 aa13.74□□□□□ -0.21
ITSN1-229ENST00000487427 HOXB8P17481 243 aaPredicted RBP13.74□□□□□ -0.21
ITSN1-229ENST00000487427 PDCP20941 246 aa13.74□□□□□ -0.21
ITSN1-229ENST00000487427 MLH1P40692 756 aa13.74□□□□□ -0.21
ITSN1-229ENST00000487427 DSC1Q08554 894 aa13.74□□□□□ -0.21
ITSN1-229ENST00000487427 HYIQ5T013 277 aa13.74□□□□□ -0.21
ITSN1-229ENST00000487427 COLGALT2Q8IYK4 626 aa13.74□□□□□ -0.21
ITSN1-229ENST00000487427 BCL7CQ8WUZ0 217 aaPredicted RBP13.74□□□□□ -0.21
ITSN1-229ENST00000487427 KHSRPQ92945 711 aaKnown RBP eCLIP13.74□□□□□ -0.21
ITSN1-229ENST00000487427 ZFP42Q96MM3 310 aa13.74□□□□□ -0.21
ITSN1-229ENST00000487427 APOL6Q9BWW8 343 aa13.74□□□□□ -0.21
ITSN1-229ENST00000487427 CCDC113Q9H0I3 377 aa13.74□□□□□ -0.21
ITSN1-229ENST00000487427 NT5C3AQ9H0P0 336 aa13.74□□□□□ -0.21
ITSN1-229ENST00000487427 EPHX3Q9H6B9 360 aa13.74□□□□□ -0.21
ITSN1-229ENST00000487427 MIOSQ9NXC5 875 aa13.74□□□□□ -0.21
ITSN1-229ENST00000487427 PARP2Q9UGN5 583 aa13.74□□□□□ -0.21
ITSN1-229ENST00000487427 KIAA1671Q9BY89 1806 aa13.74□□□□□ -0.21
ITSN1-229ENST00000487427 ZMYM2Q9UBW7 1377 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms