RNA–Protein interactions for RNA: ENST00000487211.5

RTFDC1-209, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 411 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-209ENST00000487211 PKN3Q6P5Z2 889 aa7.46□□□□□ -1.22
RTFDC1-209ENST00000487211 GALNT18Q6P9A2 607 aa7.46□□□□□ -1.22
RTFDC1-209ENST00000487211 USP50Q70EL3 339 aaPredicted RBP7.46□□□□□ -1.22
RTFDC1-209ENST00000487211 PNMA8AQ86V59 439 aaPredicted RBP7.46□□□□□ -1.22
RTFDC1-209ENST00000487211 TEX2Q8IWB9 1127 aa7.46□□□□□ -1.22
RTFDC1-209ENST00000487211 IGSF22Q8N9C0 903 aa7.46□□□□□ -1.22
RTFDC1-209ENST00000487211 AGBL5Q8NDL9 886 aa7.46□□□□□ -1.22
RTFDC1-209ENST00000487211 FBXW5Q969U6 566 aa7.46□□□□□ -1.22
RTFDC1-209ENST00000487211 TRMT2BQ96GJ1 504 aaKnown RBP7.46□□□□□ -1.22
RTFDC1-209ENST00000487211 WNK4Q96J92 1243 aa7.46□□□□□ -1.22
RTFDC1-209ENST00000487211 KCNJ15Q99712 375 aa7.46□□□□□ -1.22
RTFDC1-209ENST00000487211 JAM3Q9BX67 310 aa7.46□□□□□ -1.22
RTFDC1-209ENST00000487211 FAM126AQ9BYI3 521 aaPredicted RBP7.46□□□□□ -1.22
RTFDC1-209ENST00000487211 RWDD1Q9H446 243 aaPredicted RBP7.46□□□□□ -1.22
RTFDC1-209ENST00000487211 GNL3LQ9NVN8 582 aaKnown RBP7.46□□□□□ -1.22
RTFDC1-209ENST00000487211 PGAP2Q9UHJ9 254 aa7.46□□□□□ -1.22
RTFDC1-209ENST00000487211 DENND2AQ9ULE3 1009 aa7.46□□□□□ -1.22
RTFDC1-209ENST00000487211 ASTN2O75129 1339 aaPredicted RBP7.46□□□□□ -1.22
RTFDC1-209ENST00000487211 ZNF609O15014 1411 aa7.45□□□□□ -1.22
RTFDC1-209ENST00000487211 COL1A1P02452 1464 aaPredicted RBP7.45□□□□□ -1.22
RTFDC1-209ENST00000487211 TIAM2Q8IVF5 1701 aa7.45□□□□□ -1.22
RTFDC1-209ENST00000487211 FITM1A5D6W6 292 aa7.45□□□□□ -1.22
RTFDC1-209ENST00000487211 H7BY64 318 aa7.45□□□□□ -1.22
RTFDC1-209ENST00000487211 M0R2C6 588 aa7.45□□□□□ -1.22
RTFDC1-209ENST00000487211 NRDCO43847 1150 aa7.45□□□□□ -1.22
RTFDC1-209ENST00000487211 ADAM23O75077 832 aa7.45□□□□□ -1.22
RTFDC1-209ENST00000487211 ADAMTS4O75173 837 aa7.45□□□□□ -1.22
RTFDC1-209ENST00000487211 CKMP06732 381 aa7.45□□□□□ -1.22
RTFDC1-209ENST00000487211 CENPBP07199 599 aaPredicted RBP7.45□□□□□ -1.22
RTFDC1-209ENST00000487211 IFIT2P09913 472 aaKnown RBP7.45□□□□□ -1.22
RTFDC1-209ENST00000487211 TACR1P25103 407 aa7.45□□□□□ -1.22
RTFDC1-209ENST00000487211 PRDX5P30044 214 aa7.45□□□□□ -1.22
RTFDC1-209ENST00000487211 ERVFC1P60507 584 aa7.45□□□□□ -1.22
RTFDC1-209ENST00000487211 FAM47CQ5HY64 1035 aa7.45□□□□□ -1.22
RTFDC1-209ENST00000487211 TTC39AQ5SRH9 613 aa7.45□□□□□ -1.22
RTFDC1-209ENST00000487211 ANKRD45Q5TZF3 282 aa7.45□□□□□ -1.22
RTFDC1-209ENST00000487211 DLK2Q6UY11 383 aa7.45□□□□□ -1.22
RTFDC1-209ENST00000487211 SMC5Q8IY18 1101 aa7.45□□□□□ -1.22
RTFDC1-209ENST00000487211 LZTR1Q8N653 840 aa7.45□□□□□ -1.22
RTFDC1-209ENST00000487211 SPATA5Q8NB90 893 aa7.45□□□□□ -1.22
RTFDC1-209ENST00000487211 NUP43Q8NFH3 380 aa7.45□□□□□ -1.22
RTFDC1-209ENST00000487211 WDR66Q8TBY9 1149 aa7.45□□□□□ -1.22
RTFDC1-209ENST00000487211 OTUD7AQ8TE49 926 aaPredicted RBP7.45□□□□□ -1.22
RTFDC1-209ENST00000487211 USP33Q8TEY7 942 aa7.45□□□□□ -1.22
RTFDC1-209ENST00000487211 ASIC4Q96FT7 647 aa7.45□□□□□ -1.22
RTFDC1-209ENST00000487211 ZBED3Q96IU2 234 aaPredicted RBP7.45□□□□□ -1.22
RTFDC1-209ENST00000487211 PRMT6Q96LA8 375 aaPredicted RBP7.45□□□□□ -1.22
RTFDC1-209ENST00000487211 MYOZ2Q9NPC6 264 aa7.45□□□□□ -1.22
RTFDC1-209ENST00000487211 MBNL3Q9NUK0 354 aaKnown RBP7.45□□□□□ -1.22
RTFDC1-209ENST00000487211 ADAMTS6Q9UKP5 1117 aa7.45□□□□□ -1.22
RTFDC1-209ENST00000487211 SCAF8Q9UPN6 1271 aaKnown RBP7.45□□□□□ -1.22
RTFDC1-209ENST00000487211 A0A1B0GUL6 1792 aa7.45□□□□□ -1.22
RTFDC1-209ENST00000487211 AOX1Q06278 1338 aa7.45□□□□□ -1.22
RTFDC1-209ENST00000487211 MYO3BQ8WXR4 1341 aa7.45□□□□□ -1.22
RTFDC1-209ENST00000487211 CCDC66A2RUB6 948 aa7.44□□□□□ -1.22
RTFDC1-209ENST00000487211 C22orf46C9J442 243 aa7.44□□□□□ -1.22
RTFDC1-209ENST00000487211 WNT10BO00744 389 aa7.44□□□□□ -1.22
RTFDC1-209ENST00000487211 GLRX3O76003 335 aaKnown RBP7.44□□□□□ -1.22
RTFDC1-209ENST00000487211 NPTXRO95502 500 aa7.44□□□□□ -1.22
RTFDC1-209ENST00000487211 UQCRFS1P1P0C7P4 283 aa7.44□□□□□ -1.22
RTFDC1-209ENST00000487211 PYGMP11217 842 aa7.44□□□□□ -1.22
RTFDC1-209ENST00000487211 PRKCAP17252 672 aa7.44□□□□□ -1.22
RTFDC1-209ENST00000487211 GDNFP39905 211 aa7.44□□□□□ -1.22
RTFDC1-209ENST00000487211 CORO7P57737 925 aa7.44□□□□□ -1.22
RTFDC1-209ENST00000487211 RBM10P98175 930 aaKnown RBP7.44□□□□□ -1.22
RTFDC1-209ENST00000487211 MAP2K1Q02750 393 aaPredicted RBP7.44□□□□□ -1.22
RTFDC1-209ENST00000487211 KIR3DS1Q14943 382 aa7.44□□□□□ -1.22
RTFDC1-209ENST00000487211 ZMYM1Q5SVZ6 1142 aa7.44□□□□□ -1.22
RTFDC1-209ENST00000487211 LDHDQ86WU2 507 aa7.44□□□□□ -1.22
RTFDC1-209ENST00000487211 CNTROBQ8N137 903 aa7.44□□□□□ -1.22
RTFDC1-209ENST00000487211 ZNF384Q8TF68 577 aa7.44□□□□□ -1.22
RTFDC1-209ENST00000487211 TBC1D22AQ8WUA7 517 aa7.44□□□□□ -1.22
RTFDC1-209ENST00000487211 PLCD4Q9BRC7 762 aa7.44□□□□□ -1.22
RTFDC1-209ENST00000487211 MRIQ9BWK5 157 aa7.44□□□□□ -1.22
RTFDC1-209ENST00000487211 CDIP1Q9H305 208 aa7.44□□□□□ -1.22
RTFDC1-209ENST00000487211 BOLA2Q9H3K6 86 aa7.44□□□□□ -1.22
RTFDC1-209ENST00000487211 C19orf73Q9NVV2 129 aa7.44□□□□□ -1.22
RTFDC1-209ENST00000487211 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.44□□□□□ -1.22
RTFDC1-209ENST00000487211 ABCF2Q9UG63 623 aa7.44□□□□□ -1.22
RTFDC1-209ENST00000487211 COA3Q9Y2R0 106 aaPredicted RBP7.44□□□□□ -1.22
RTFDC1-209ENST00000487211 SALL1Q9NSC2 1324 aa7.44□□□□□ -1.22
RTFDC1-209ENST00000487211 A0A1W2PQJ5 194 aa7.43□□□□□ -1.22
RTFDC1-209ENST00000487211 NOTOA8MTQ0 251 aa7.43□□□□□ -1.22
RTFDC1-209ENST00000487211 WNT9AO14904 365 aa7.43□□□□□ -1.22
RTFDC1-209ENST00000487211 GSTA4O15217 222 aa7.43□□□□□ -1.22
RTFDC1-209ENST00000487211 RNASE1P07998 156 aaKnown RBP7.43□□□□□ -1.22
RTFDC1-209ENST00000487211 MSL3P1P0C860 447 aa7.43□□□□□ -1.22
RTFDC1-209ENST00000487211 ATP5JP18859 108 aa7.43□□□□□ -1.22
RTFDC1-209ENST00000487211 POU3F3P20264 500 aaPredicted RBP7.43□□□□□ -1.22
RTFDC1-209ENST00000487211 TRHRP34981 398 aaPredicted RBP7.43□□□□□ -1.22
RTFDC1-209ENST00000487211 MMP14P50281 582 aa7.43□□□□□ -1.22
RTFDC1-209ENST00000487211 MVKQ03426 396 aa7.43□□□□□ -1.22
RTFDC1-209ENST00000487211 STRN3Q13033 797 aa7.43□□□□□ -1.22
RTFDC1-209ENST00000487211 SEPT7Q16181 437 aaKnown RBP7.43□□□□□ -1.22
RTFDC1-209ENST00000487211 TSHZ3Q63HK5 1081 aa7.43□□□□□ -1.22
RTFDC1-209ENST00000487211 APOBEC3HQ6NTF7 200 aaKnown RBP7.43□□□□□ -1.22
RTFDC1-209ENST00000487211 STRA8Q7Z7C7 330 aa7.43□□□□□ -1.22
RTFDC1-209ENST00000487211 PLEKHO2Q8TD55 490 aa7.43□□□□□ -1.22
RTFDC1-209ENST00000487211 FAM122AQ96E09 287 aa7.43□□□□□ -1.22
RTFDC1-209ENST00000487211 EDC3Q96F86 508 aaKnown RBP7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms