RNA–Protein interactions for RNA: ENST00000487043.5

PTCD3-216, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 1,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-216ENST00000487043 PLA2G2DQ9UNK4 145 aa5.02□□□□□ -1.61
PTCD3-216ENST00000487043 PCDHB6Q9Y5E3 794 aa5.02□□□□□ -1.61
PTCD3-216ENST00000487043 FGD6Q6ZV73 1430 aa5.02□□□□□ -1.61
PTCD3-216ENST00000487043 ABCC10Q5T3U5 1492 aa5.01□□□□□ -1.61
PTCD3-216ENST00000487043 H3BML4 177 aa5.01□□□□□ -1.61
PTCD3-216ENST00000487043 IFRD1O00458 451 aaPredicted RBP5.01□□□□□ -1.61
PTCD3-216ENST00000487043 MAFGO15525 162 aa5.01□□□□□ -1.61
PTCD3-216ENST00000487043 TUSC2O75896 110 aa5.01□□□□□ -1.61
PTCD3-216ENST00000487043 UBXN7O94888 489 aa5.01□□□□□ -1.61
PTCD3-216ENST00000487043 ALDH2P05091 517 aa5.01□□□□□ -1.61
PTCD3-216ENST00000487043 GSPT1P15170 499 aaKnown RBP5.01□□□□□ -1.61
PTCD3-216ENST00000487043 XPAP23025 273 aaPredicted RBP5.01□□□□□ -1.61
PTCD3-216ENST00000487043 EDNRBP24530 442 aa5.01□□□□□ -1.61
PTCD3-216ENST00000487043 APEX1P27695 318 aaKnown RBP5.01□□□□□ -1.61
PTCD3-216ENST00000487043 SERPINB3P29508 390 aa5.01□□□□□ -1.61
PTCD3-216ENST00000487043 NKX3-2P78367 333 aa5.01□□□□□ -1.61
PTCD3-216ENST00000487043 MALLQ13021 153 aa5.01□□□□□ -1.61
PTCD3-216ENST00000487043 ADRM1Q16186 407 aa5.01□□□□□ -1.61
PTCD3-216ENST00000487043 KIAA0753Q2KHM9 967 aa5.01□□□□□ -1.61
PTCD3-216ENST00000487043 C3orf36Q3SXR2 165 aa5.01□□□□□ -1.61
PTCD3-216ENST00000487043 ZNF385BQ569K4 471 aa5.01□□□□□ -1.61
PTCD3-216ENST00000487043 MUM1L1Q5H9M0 696 aa5.01□□□□□ -1.61
PTCD3-216ENST00000487043 PHF19Q5T6S3 580 aa5.01□□□□□ -1.61
PTCD3-216ENST00000487043 TCERG1LQ5VWI1 586 aa5.01□□□□□ -1.61
PTCD3-216ENST00000487043 FAM43AQ8N2R8 423 aa5.01□□□□□ -1.61
PTCD3-216ENST00000487043 CDYL2Q8N8U2 506 aa5.01□□□□□ -1.61
PTCD3-216ENST00000487043 IGDCC4Q8TDY8 1250 aa5.01□□□□□ -1.61
PTCD3-216ENST00000487043 RIN2Q8WYP3 895 aaPredicted RBP5.01□□□□□ -1.61
PTCD3-216ENST00000487043 TNIP3Q96KP6 325 aa5.01□□□□□ -1.61
PTCD3-216ENST00000487043 ADI1Q9BV57 179 aa5.01□□□□□ -1.61
PTCD3-216ENST00000487043 NAA15Q9BXJ9 866 aaKnown RBP5.01□□□□□ -1.61
PTCD3-216ENST00000487043 B3GNT5Q9BYG0 378 aa5.01□□□□□ -1.61
PTCD3-216ENST00000487043 OR10A5Q9H207 317 aa5.01□□□□□ -1.61
PTCD3-216ENST00000487043 DMRT3Q9NQL9 472 aa5.01□□□□□ -1.61
PTCD3-216ENST00000487043 CFDP1Q9UEE9 299 aaPredicted RBP5.01□□□□□ -1.61
PTCD3-216ENST00000487043 PUF60Q9UHX1 559 aaKnown RBP5.01□□□□□ -1.61
PTCD3-216ENST00000487043 IPPQ9Y573 584 aa5.01□□□□□ -1.61
PTCD3-216ENST00000487043 PCDHGB6Q9Y5F9 930 aa5.01□□□□□ -1.61
PTCD3-216ENST00000487043 GPATCH8Q9UKJ3 1502 aaKnown RBP5.01□□□□□ -1.61
PTCD3-216ENST00000487043 KIF14Q15058 1648 aa5.01□□□□□ -1.61
PTCD3-216ENST00000487043 A0A0A6YYJ9 748 aa5□□□□□ -1.61
PTCD3-216ENST00000487043 MYOCOSA0A1B0GUC4 107 aa5□□□□□ -1.61
PTCD3-216ENST00000487043 OR14I1A6ND48 311 aa5□□□□□ -1.61
PTCD3-216ENST00000487043 FAM227AF5H4B4 570 aa5□□□□□ -1.61
PTCD3-216ENST00000487043 RFXAPO00287 272 aa5□□□□□ -1.61
PTCD3-216ENST00000487043 B3GALT2O43825 422 aa5□□□□□ -1.61
PTCD3-216ENST00000487043 PEX10O60683 326 aa5□□□□□ -1.61
PTCD3-216ENST00000487043 PQBP1O60828 265 aaKnown RBP5□□□□□ -1.61
PTCD3-216ENST00000487043 GLRBP48167 497 aa5□□□□□ -1.61
PTCD3-216ENST00000487043 TMEM62Q0P6H9 643 aa5□□□□□ -1.61
PTCD3-216ENST00000487043 NFATC3Q12968 1075 aa5□□□□□ -1.61
PTCD3-216ENST00000487043 IL10RAQ13651 578 aa5□□□□□ -1.61
PTCD3-216ENST00000487043 DHX8Q14562 1220 aaKnown RBP5□□□□□ -1.61
PTCD3-216ENST00000487043 SKIDA1Q1XH10 827 aa5□□□□□ -1.61
PTCD3-216ENST00000487043 C11orf96Q7Z7L8 435 aa5□□□□□ -1.61
PTCD3-216ENST00000487043 SRLQ86TD4 932 aa5□□□□□ -1.61
PTCD3-216ENST00000487043 ZC3H18Q86VM9 953 aaKnown RBP5□□□□□ -1.61
PTCD3-216ENST00000487043 MARCH10Q8NA82 808 aaPredicted RBP5□□□□□ -1.61
PTCD3-216ENST00000487043 VPS37AQ8NEZ2 397 aa5□□□□□ -1.61
PTCD3-216ENST00000487043 KAT5Q92993 513 aa5□□□□□ -1.61
PTCD3-216ENST00000487043 HIST1H2AHQ96KK5 128 aa5□□□□□ -1.61
PTCD3-216ENST00000487043 HIST1H2AJQ99878 128 aa5□□□□□ -1.61
PTCD3-216ENST00000487043 APOL5Q9BWW9 433 aa5□□□□□ -1.61
PTCD3-216ENST00000487043 BTBD2Q9BX70 525 aa5□□□□□ -1.61
PTCD3-216ENST00000487043 SGPP1Q9BX95 441 aa5□□□□□ -1.61
PTCD3-216ENST00000487043 PITHD1Q9GZP4 211 aaPredicted RBP5□□□□□ -1.61
PTCD3-216ENST00000487043 TMEM60Q9H2L4 133 aa5□□□□□ -1.61
PTCD3-216ENST00000487043 HSPBP1Q9NZL4 362 aa5□□□□□ -1.61
PTCD3-216ENST00000487043 MAGEL2Q9UJ55 1249 aa5□□□□□ -1.61
PTCD3-216ENST00000487043 WASF3Q9UPY6 502 aa5□□□□□ -1.61
PTCD3-216ENST00000487043 KCTD3Q9Y597 815 aa5□□□□□ -1.61
PTCD3-216ENST00000487043 TCOF1Q13428 1488 aaKnown RBP5□□□□□ -1.61
PTCD3-216ENST00000487043 WDR7Q9Y4E6 1490 aa5□□□□□ -1.61
PTCD3-216ENST00000487043 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.99□□□□□ -1.61
PTCD3-216ENST00000487043 PTPN23Q9H3S7 1636 aa4.99□□□□□ -1.61
PTCD3-216ENST00000487043 TEX51A0A1B0GUA7 166 aa4.99□□□□□ -1.61
PTCD3-216ENST00000487043 FOXD2O60548 495 aaPredicted RBP4.99□□□□□ -1.61
PTCD3-216ENST00000487043 HRGP04196 525 aa4.99□□□□□ -1.61
PTCD3-216ENST00000487043 HTR1BP28222 390 aa4.99□□□□□ -1.61
PTCD3-216ENST00000487043 MCAMP43121 646 aa4.99□□□□□ -1.61
PTCD3-216ENST00000487043 HTR3AP46098 478 aa4.99□□□□□ -1.61
PTCD3-216ENST00000487043 GPR15P49685 360 aa4.99□□□□□ -1.61
PTCD3-216ENST00000487043 AK2P54819 239 aa4.99□□□□□ -1.61
PTCD3-216ENST00000487043 ZNF280AP59817 542 aaPredicted RBP4.99□□□□□ -1.61
PTCD3-216ENST00000487043 FAM193AP78312 1265 aa4.99□□□□□ -1.61
PTCD3-216ENST00000487043 ZNF200P98182 395 aaPredicted RBP4.99□□□□□ -1.61
PTCD3-216ENST00000487043 NOMO1Q15155 1222 aa4.99□□□□□ -1.61
PTCD3-216ENST00000487043 LONRF1Q17RB8 773 aa4.99□□□□□ -1.61
PTCD3-216ENST00000487043 DARS2Q6PI48 645 aaKnown RBP4.99□□□□□ -1.61
PTCD3-216ENST00000487043 KLHDC10Q6PID8 442 aa4.99□□□□□ -1.61
PTCD3-216ENST00000487043 BTNL9Q6UXG8 535 aa4.99□□□□□ -1.61
PTCD3-216ENST00000487043 NPNTQ6UXI9 565 aa4.99□□□□□ -1.61
PTCD3-216ENST00000487043 MIGA2Q7L4E1 593 aa4.99□□□□□ -1.61
PTCD3-216ENST00000487043 TMC6Q7Z403 805 aa4.99□□□□□ -1.61
PTCD3-216ENST00000487043 SKAP1Q86WV1 359 aa4.99□□□□□ -1.61
PTCD3-216ENST00000487043 GLB1L3Q8NCI6 653 aaPredicted RBP4.99□□□□□ -1.61
PTCD3-216ENST00000487043 GJA10Q969M2 543 aa4.99□□□□□ -1.61
PTCD3-216ENST00000487043 HDAC10Q969S8 669 aa4.99□□□□□ -1.61
PTCD3-216ENST00000487043 CGRRF1Q99675 332 aa4.99□□□□□ -1.61
PTCD3-216ENST00000487043 TACO1Q9BSH4 297 aaKnown RBP4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms