RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 CRY1Q16526 586 aa5.53□□□□□ -1.52
SNRNP40-205ENST00000486941 ABHD17CQ6PCB6 329 aa5.53□□□□□ -1.52
SNRNP40-205ENST00000486941 HDGFL2Q7Z4V5 671 aaPredicted RBP5.53□□□□□ -1.52
SNRNP40-205ENST00000486941 NME9Q86XW9 330 aa5.53□□□□□ -1.52
SNRNP40-205ENST00000486941 CISD2Q8N5K1 135 aaKnown RBP5.53□□□□□ -1.52
SNRNP40-205ENST00000486941 OR14K1Q8NGZ2 314 aa5.53□□□□□ -1.52
SNRNP40-205ENST00000486941 SLC7A14Q8TBB6 771 aa5.53□□□□□ -1.52
SNRNP40-205ENST00000486941 CDC6Q99741 560 aa5.53□□□□□ -1.52
SNRNP40-205ENST00000486941 DHRS4Q9BTZ2 278 aa5.53□□□□□ -1.52
SNRNP40-205ENST00000486941 TRIM55Q9BYV6 548 aa5.53□□□□□ -1.52
SNRNP40-205ENST00000486941 OR10A5Q9H207 317 aa5.53□□□□□ -1.52
SNRNP40-205ENST00000486941 COQ6Q9Y2Z9 468 aa5.53□□□□□ -1.52
SNRNP40-205ENST00000486941 MRPS23Q9Y3D9 190 aaKnown RBP5.53□□□□□ -1.52
SNRNP40-205ENST00000486941 CD163L1Q9NR16 1453 aa5.52□□□□□ -1.53
SNRNP40-205ENST00000486941 A0A0G2JNJ9 132 aa5.52□□□□□ -1.53
SNRNP40-205ENST00000486941 CCDC85CA6NKD9 419 aa5.52□□□□□ -1.53
SNRNP40-205ENST00000486941 U2SURPO15042 1029 aaKnown RBP5.52□□□□□ -1.53
SNRNP40-205ENST00000486941 RASGRP1O95267 797 aa5.52□□□□□ -1.53
SNRNP40-205ENST00000486941 STAT3P40763 770 aa5.52□□□□□ -1.53
SNRNP40-205ENST00000486941 GABREP78334 506 aa5.52□□□□□ -1.53
SNRNP40-205ENST00000486941 KRTAP1-1Q07627 177 aa5.52□□□□□ -1.53
SNRNP40-205ENST00000486941 ZNF568Q3ZCX4 644 aa5.52□□□□□ -1.53
SNRNP40-205ENST00000486941 MTERF2Q49AM1 385 aa5.52□□□□□ -1.53
SNRNP40-205ENST00000486941 Q6ZPA2 131 aa5.52□□□□□ -1.53
SNRNP40-205ENST00000486941 DPH6Q7L8W6 267 aa5.52□□□□□ -1.53
SNRNP40-205ENST00000486941 OVCH1Q7RTY7 1134 aa5.52□□□□□ -1.53
SNRNP40-205ENST00000486941 GSTCDQ8NEC7 633 aa5.52□□□□□ -1.53
SNRNP40-205ENST00000486941 DLG3Q92796 817 aa5.52□□□□□ -1.53
SNRNP40-205ENST00000486941 CSRNP2Q9H175 543 aa5.52□□□□□ -1.53
SNRNP40-205ENST00000486941 SLC12A5Q9H2X9 1139 aa5.52□□□□□ -1.53
SNRNP40-205ENST00000486941 TLR9Q9NR96 1032 aa5.52□□□□□ -1.53
SNRNP40-205ENST00000486941 TERF2IPQ9NYB0 399 aa5.52□□□□□ -1.53
SNRNP40-205ENST00000486941 Q9UFV3 132 aa5.52□□□□□ -1.53
SNRNP40-205ENST00000486941 PUF60Q9UHX1 559 aaKnown RBP5.52□□□□□ -1.53
SNRNP40-205ENST00000486941 MAP3K5Q99683 1374 aa5.52□□□□□ -1.53
SNRNP40-205ENST00000486941 PAPPAQ13219 1627 aa5.52□□□□□ -1.53
SNRNP40-205ENST00000486941 QSER1Q2KHR3 1735 aa5.51□□□□□ -1.53
SNRNP40-205ENST00000486941 EDC4Q6P2E9 1401 aaKnown RBP5.51□□□□□ -1.53
SNRNP40-205ENST00000486941 FAM208AQ9UK61 1670 aaKnown RBP5.51□□□□□ -1.53
SNRNP40-205ENST00000486941 PRAMEF22A3QJZ6 481 aa5.51□□□□□ -1.53
SNRNP40-205ENST00000486941 TGFB2P61812 414 aa5.51□□□□□ -1.53
SNRNP40-205ENST00000486941 ST5P78524 1137 aa5.51□□□□□ -1.53
SNRNP40-205ENST00000486941 CATSPEREQ5SY80 951 aa5.51□□□□□ -1.53
SNRNP40-205ENST00000486941 PCSK4Q6UW60 755 aa5.51□□□□□ -1.53
SNRNP40-205ENST00000486941 ZNF627Q7L945 461 aa5.51□□□□□ -1.53
SNRNP40-205ENST00000486941 IP6K1Q92551 441 aa5.51□□□□□ -1.53
SNRNP40-205ENST00000486941 LARP4BQ92615 738 aaKnown RBP5.51□□□□□ -1.53
SNRNP40-205ENST00000486941 FOXRED1Q96CU9 486 aaPredicted RBP5.51□□□□□ -1.53
SNRNP40-205ENST00000486941 PLEKHG4BQ96PX9 1271 aa5.51□□□□□ -1.53
SNRNP40-205ENST00000486941 TRIM8Q9BZR9 551 aa5.51□□□□□ -1.53
SNRNP40-205ENST00000486941 OR10A2Q9H208 303 aa5.51□□□□□ -1.53
SNRNP40-205ENST00000486941 COL24A1Q17RW2 1714 aa5.51□□□□□ -1.53
SNRNP40-205ENST00000486941 GOLGA6L22H0YM25 854 aa5.5□□□□□ -1.53
SNRNP40-205ENST00000486941 ZBTB48P10074 688 aaPredicted RBP5.5□□□□□ -1.53
SNRNP40-205ENST00000486941 KRT4P19013 534 aa5.5□□□□□ -1.53
SNRNP40-205ENST00000486941 TGM1P22735 817 aa5.5□□□□□ -1.53
SNRNP40-205ENST00000486941 HIBADHP31937 336 aaKnown RBP5.5□□□□□ -1.53
SNRNP40-205ENST00000486941 RPS19P39019 145 aaKnown RBP5.5□□□□□ -1.53
SNRNP40-205ENST00000486941 ABHD18Q0P651 414 aa5.5□□□□□ -1.53
SNRNP40-205ENST00000486941 SERINC3Q13530 473 aa5.5□□□□□ -1.53
SNRNP40-205ENST00000486941 RASA3Q14644 834 aa5.5□□□□□ -1.53
SNRNP40-205ENST00000486941 OTOP2Q7RTS6 562 aa5.5□□□□□ -1.53
SNRNP40-205ENST00000486941 LDLRAD3Q86YD5 345 aa5.5□□□□□ -1.53
SNRNP40-205ENST00000486941 ZC3H7AQ8IWR0 971 aaKnown RBP5.5□□□□□ -1.53
SNRNP40-205ENST00000486941 AMER2Q8N7J2 671 aa5.5□□□□□ -1.53
SNRNP40-205ENST00000486941 FAM89AQ96GI7 184 aa5.5□□□□□ -1.53
SNRNP40-205ENST00000486941 TMEM176AQ96HP8 235 aa5.5□□□□□ -1.53
SNRNP40-205ENST00000486941 GBP4Q96PP9 640 aa5.5□□□□□ -1.53
SNRNP40-205ENST00000486941 ZNF703Q9H7S9 590 aaPredicted RBP5.5□□□□□ -1.53
SNRNP40-205ENST00000486941 MMRN2Q9H8L6 949 aa5.5□□□□□ -1.53
SNRNP40-205ENST00000486941 MAGEL2Q9UJ55 1249 aa5.5□□□□□ -1.53
SNRNP40-205ENST00000486941 FBXO10Q9UK96 956 aa5.5□□□□□ -1.53
SNRNP40-205ENST00000486941 B3GALT1Q9Y5Z6 326 aa5.5□□□□□ -1.53
SNRNP40-205ENST00000486941 A0A1W2PP64 1363 aa5.5□□□□□ -1.53
SNRNP40-205ENST00000486941 LY75O60449 1722 aa5.49□□□□□ -1.53
SNRNP40-205ENST00000486941 STK10O94804 968 aaKnown RBP5.49□□□□□ -1.53
SNRNP40-205ENST00000486941 HMGB2P26583 209 aaKnown RBP5.49□□□□□ -1.53
SNRNP40-205ENST00000486941 ADAM8P78325 824 aa5.49□□□□□ -1.53
SNRNP40-205ENST00000486941 SLC25A3Q00325 362 aa5.49□□□□□ -1.53
SNRNP40-205ENST00000486941 DPTQ07507 201 aa5.49□□□□□ -1.53
SNRNP40-205ENST00000486941 GRM7Q14831 915 aa5.49□□□□□ -1.53
SNRNP40-205ENST00000486941 KRTAP15-1Q3LI76 137 aa5.49□□□□□ -1.53
SNRNP40-205ENST00000486941 FGD2Q7Z6J4 655 aa5.49□□□□□ -1.53
SNRNP40-205ENST00000486941 RTN4RL1Q86UN2 441 aaPredicted RBP5.49□□□□□ -1.53
SNRNP40-205ENST00000486941 COG3Q96JB2 828 aa5.49□□□□□ -1.53
SNRNP40-205ENST00000486941 CEP89Q96ST8 783 aa5.49□□□□□ -1.53
SNRNP40-205ENST00000486941 C11orf21Q9P2W6 132 aa5.49□□□□□ -1.53
SNRNP40-205ENST00000486941 SH3BP1Q9Y3L3 701 aa5.49□□□□□ -1.53
SNRNP40-205ENST00000486941 RGPD2P0DJD1 1756 aa5.49□□□□□ -1.53
SNRNP40-205ENST00000486941 KDM2BQ8NHM5 1336 aa5.48□□□□□ -1.53
SNRNP40-205ENST00000486941 TUBGCP6Q96RT7 1819 aa5.48□□□□□ -1.53
SNRNP40-205ENST00000486941 ANKRD36BQ8N2N9 1353 aa5.48□□□□□ -1.53
SNRNP40-205ENST00000486941 SDHAP31040 664 aa5.48□□□□□ -1.53
SNRNP40-205ENST00000486941 HOXC9P31274 260 aa5.48□□□□□ -1.53
SNRNP40-205ENST00000486941 AMPHP49418 695 aa5.48□□□□□ -1.53
SNRNP40-205ENST00000486941 ANTXR2P58335 489 aa5.48□□□□□ -1.53
SNRNP40-205ENST00000486941 ADAM15Q13444 863 aa5.48□□□□□ -1.53
SNRNP40-205ENST00000486941 GPR162Q16538 588 aa5.48□□□□□ -1.53
SNRNP40-205ENST00000486941 GRAMD4Q6IC98 578 aa5.48□□□□□ -1.53
SNRNP40-205ENST00000486941 CKAP2LQ8IYA6 745 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms