RNA–Protein interactions for RNA: ENST00000486572.1

COL1A1-207, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-207ENST00000486572 PDZD7Q9H5P4 517 aa20.05■□□□□ 0.8
COL1A1-207ENST00000486572 TMEM134Q9H6X4 195 aa20.05■□□□□ 0.8
COL1A1-207ENST00000486572 UBN1Q9NPG3 1134 aa20.05■□□□□ 0.8
COL1A1-207ENST00000486572 LARSQ9P2J5 1176 aaKnown RBP20.05■□□□□ 0.8
COL1A1-207ENST00000486572 INPP5FQ9Y2H2 1132 aa20.05■□□□□ 0.8
COL1A1-207ENST00000486572 GRM6O15303 877 aa20.04■□□□□ 0.8
COL1A1-207ENST00000486572 SLC16A4O15374 487 aa20.04■□□□□ 0.8
COL1A1-207ENST00000486572 OFD1O75665 1012 aa20.04■□□□□ 0.8
COL1A1-207ENST00000486572 STAT6P42226 847 aa20.04■□□□□ 0.8
COL1A1-207ENST00000486572 ME1P48163 572 aa20.04■□□□□ 0.8
COL1A1-207ENST00000486572 SMTNP53814 917 aa20.04■□□□□ 0.8
COL1A1-207ENST00000486572 URGCPQ8TCY9 931 aa20.04■□□□□ 0.8
COL1A1-207ENST00000486572 ADPGKQ9BRR6 497 aa20.04■□□□□ 0.8
COL1A1-207ENST00000486572 NXF3Q9H4D5 531 aaKnown RBP20.04■□□□□ 0.8
COL1A1-207ENST00000486572 PLAGL2Q9UPG8 496 aa20.04■□□□□ 0.8
COL1A1-207ENST00000486572 HES2Q9Y543 173 aa20.04■□□□□ 0.8
COL1A1-207ENST00000486572 ATP6V1DQ9Y5K8 247 aa20.04■□□□□ 0.8
COL1A1-207ENST00000486572 PRRC2BQ5JSZ5 2229 aaKnown RBP20.04■□□□□ 0.8
COL1A1-207ENST00000486572 A0A087X0B3 334 aa20.03■□□□□ 0.8
COL1A1-207ENST00000486572 TBCAO75347 108 aaKnown RBP20.03■□□□□ 0.8
COL1A1-207ENST00000486572 FAM13AO94988 1023 aa20.03■□□□□ 0.8
COL1A1-207ENST00000486572 ITGB1P05556 798 aa20.03■□□□□ 0.8
COL1A1-207ENST00000486572 ZNF131P52739 623 aa20.03■□□□□ 0.8
COL1A1-207ENST00000486572 GIT2Q14161 759 aa20.03■□□□□ 0.8
COL1A1-207ENST00000486572 AXDND1Q5T1B0 1012 aaPredicted RBP20.03■□□□□ 0.8
COL1A1-207ENST00000486572 ATF7IP2Q5U623 682 aa20.03■□□□□ 0.8
COL1A1-207ENST00000486572 THNSL1Q8IYQ7 743 aa20.03■□□□□ 0.8
COL1A1-207ENST00000486572 ZNF558Q96NG5 402 aa20.03■□□□□ 0.8
COL1A1-207ENST00000486572 PARVGQ9HBI0 331 aa20.03■□□□□ 0.8
COL1A1-207ENST00000486572 ALG13Q9NP73 1137 aaKnown RBP20.03■□□□□ 0.8
COL1A1-207ENST00000486572 TBC1D13Q9NVG8 400 aa20.03■□□□□ 0.8
COL1A1-207ENST00000486572 USP20Q9Y2K6 914 aa20.03■□□□□ 0.8
COL1A1-207ENST00000486572 MYH11P35749 1972 aa20.03■□□□□ 0.8
COL1A1-207ENST00000486572 H0YCG3 227 aa20.02■□□□□ 0.8
COL1A1-207ENST00000486572 PPM1AP35813 382 aa20.02■□□□□ 0.8
COL1A1-207ENST00000486572 KRT85P78386 507 aa20.02■□□□□ 0.8
COL1A1-207ENST00000486572 RNASELQ05823 741 aaKnown RBP20.02■□□□□ 0.8
COL1A1-207ENST00000486572 TIGD5Q53EQ6 642 aa20.02■□□□□ 0.8
COL1A1-207ENST00000486572 NT5DC1Q5TFE4 455 aa20.02■□□□□ 0.8
COL1A1-207ENST00000486572 SHC4Q6S5L8 630 aa20.02■□□□□ 0.8
COL1A1-207ENST00000486572 KCNT2Q6UVM3 1135 aa20.02■□□□□ 0.8
COL1A1-207ENST00000486572 SV2BQ7L1I2 683 aa20.02■□□□□ 0.8
COL1A1-207ENST00000486572 TAS1R3Q7RTX0 852 aa20.02■□□□□ 0.8
COL1A1-207ENST00000486572 PDILTQ8N807 584 aa20.02■□□□□ 0.8
COL1A1-207ENST00000486572 TMEM161BQ8NDZ6 487 aa20.02■□□□□ 0.8
COL1A1-207ENST00000486572 APOL6Q9BWW8 343 aa20.02■□□□□ 0.8
COL1A1-207ENST00000486572 MRPL4Q9BYD3 311 aaKnown RBP20.02■□□□□ 0.8
COL1A1-207ENST00000486572 PANK2Q9BZ23 570 aa20.02■□□□□ 0.8
COL1A1-207ENST00000486572 RNF39Q9H2S5 420 aa20.02■□□□□ 0.8
COL1A1-207ENST00000486572 KANSL3Q9P2N6 904 aa20.02■□□□□ 0.8
COL1A1-207ENST00000486572 RCOR1Q9UKL0 485 aa20.02■□□□□ 0.8
COL1A1-207ENST00000486572 PCDHA7Q9UN72 937 aa20.02■□□□□ 0.8
COL1A1-207ENST00000486572 EYSQ5T1H1 3165 aa20.01■□□□□ 0.79
COL1A1-207ENST00000486572 ZMYM2Q9UBW7 1377 aa20.01■□□□□ 0.79
COL1A1-207ENST00000486572 INPPL1O15357 1258 aa20.01■□□□□ 0.79
COL1A1-207ENST00000486572 ZC3H11AO75152 810 aaKnown RBP eCLIP20.01■□□□□ 0.79
COL1A1-207ENST00000486572 FGF18O76093 207 aa20.01■□□□□ 0.79
COL1A1-207ENST00000486572 PBX3P40426 434 aa20.01■□□□□ 0.79
COL1A1-207ENST00000486572 MLH1P40692 756 aa20.01■□□□□ 0.79
COL1A1-207ENST00000486572 NCKAP1LP55160 1127 aa20.01■□□□□ 0.79
COL1A1-207ENST00000486572 STRN3Q13033 797 aa20.01■□□□□ 0.79
COL1A1-207ENST00000486572 DCAF4L1Q3SXM0 396 aa20.01■□□□□ 0.79
COL1A1-207ENST00000486572 EEF1DP3Q658K8 133 aa20.01■□□□□ 0.79
COL1A1-207ENST00000486572 APBB1IPQ7Z5R6 666 aaPredicted RBP20.01■□□□□ 0.79
COL1A1-207ENST00000486572 MYCT1Q8N699 235 aa20.01■□□□□ 0.79
COL1A1-207ENST00000486572 SPPL3Q8TCT6 385 aa20.01■□□□□ 0.79
COL1A1-207ENST00000486572 ZHX3Q9H4I2 956 aa20.01■□□□□ 0.79
COL1A1-207ENST00000486572 TNFSF13BQ9Y275 285 aa20.01■□□□□ 0.79
COL1A1-207ENST00000486572 GIT1Q9Y2X7 761 aa20.01■□□□□ 0.79
COL1A1-207ENST00000486572 CARNS1A5YM72 827 aa20■□□□□ 0.79
COL1A1-207ENST00000486572 ARL5CA6NH57 179 aa20■□□□□ 0.79
COL1A1-207ENST00000486572 MAPTP10636 758 aaKnown RBP20■□□□□ 0.79
COL1A1-207ENST00000486572 SCP2P22307 547 aa20■□□□□ 0.79
COL1A1-207ENST00000486572 AKAP5P24588 427 aa20■□□□□ 0.79
COL1A1-207ENST00000486572 ALDH7A1P49419 539 aaKnown RBP20■□□□□ 0.79
COL1A1-207ENST00000486572 AFF1P51825 1210 aaKnown RBP20■□□□□ 0.79
COL1A1-207ENST00000486572 UBE3AQ05086 875 aa20■□□□□ 0.79
COL1A1-207ENST00000486572 DYMQ7RTS9 669 aa20■□□□□ 0.79
COL1A1-207ENST00000486572 POF1BQ8WVV4 589 aa20■□□□□ 0.79
COL1A1-207ENST00000486572 DDX12PQ92771 950 aa20■□□□□ 0.79
COL1A1-207ENST00000486572 GAD1Q99259 594 aa20■□□□□ 0.79
COL1A1-207ENST00000486572 ACO2Q99798 780 aaKnown RBP20■□□□□ 0.79
COL1A1-207ENST00000486572 PLXNA4Q9HCM2 1894 aa20■□□□□ 0.79
COL1A1-207ENST00000486572 MYMKA6NI61 221 aa19.99■□□□□ 0.79
COL1A1-207ENST00000486572 K7ENM7 598 aa19.99■□□□□ 0.79
COL1A1-207ENST00000486572 TRAK2O60296 914 aa19.99■□□□□ 0.79
COL1A1-207ENST00000486572 POMCP01189 267 aa19.99■□□□□ 0.79
COL1A1-207ENST00000486572 DNAJB1P25685 340 aa19.99■□□□□ 0.79
COL1A1-207ENST00000486572 BCAR1P56945 870 aa19.99■□□□□ 0.79
COL1A1-207ENST00000486572 CAMK1Q14012 370 aa19.99■□□□□ 0.79
COL1A1-207ENST00000486572 SKIV2LQ15477 1246 aaKnown RBP19.99■□□□□ 0.79
COL1A1-207ENST00000486572 E2F4Q16254 413 aa19.99■□□□□ 0.79
COL1A1-207ENST00000486572 HAUS6Q7Z4H7 955 aa19.99■□□□□ 0.79
COL1A1-207ENST00000486572 SLC39A11Q8N1S5 342 aa19.99■□□□□ 0.79
COL1A1-207ENST00000486572 LEO1Q8WVC0 666 aaPredicted RBP19.99■□□□□ 0.79
COL1A1-207ENST00000486572 KCNN1Q92952 543 aa19.99■□□□□ 0.79
COL1A1-207ENST00000486572 CHAMP1Q96JM3 812 aa19.99■□□□□ 0.79
COL1A1-207ENST00000486572 SPATA32Q96LK8 384 aa19.99■□□□□ 0.79
COL1A1-207ENST00000486572 ZFP42Q96MM3 310 aa19.99■□□□□ 0.79
COL1A1-207ENST00000486572 TARS2Q9BW92 718 aaKnown RBP19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms