RNA–Protein interactions for RNA: ENST00000486263.1

NELFCD-209, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 2

Gene NELFCD, Length 708 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-209ENST00000486263 CLDN3O15551 220 aa15.19■□□□□ 0.02
NELFCD-209ENST00000486263 TSPAN1O60635 241 aa15.19■□□□□ 0.02
NELFCD-209ENST00000486263 IQCF3P0C7M6 154 aa15.19■□□□□ 0.02
NELFCD-209ENST00000486263 RAG1P15918 1043 aa15.19■□□□□ 0.02
NELFCD-209ENST00000486263 HOXD13P35453 343 aa15.19■□□□□ 0.02
NELFCD-209ENST00000486263 CCL23P55773 120 aa15.19■□□□□ 0.02
NELFCD-209ENST00000486263 HSP90AA2PQ14568 343 aaPredicted RBP15.19■□□□□ 0.02
NELFCD-209ENST00000486263 ANKRD40Q6AI12 368 aa15.19■□□□□ 0.02
NELFCD-209ENST00000486263 NOTUMQ6P988 496 aa15.19■□□□□ 0.02
NELFCD-209ENST00000486263 TSHZ1Q6ZSZ6 1077 aa15.19■□□□□ 0.02
NELFCD-209ENST00000486263 FAM228AQ86W67 206 aa15.19■□□□□ 0.02
NELFCD-209ENST00000486263 AOPEPQ8N6M6 819 aa15.19■□□□□ 0.02
NELFCD-209ENST00000486263 FAM200AQ8TCP9 573 aa15.19■□□□□ 0.02
NELFCD-209ENST00000486263 NOC3LQ8WTT2 800 aaKnown RBP15.19■□□□□ 0.02
NELFCD-209ENST00000486263 TMEM40Q8WWA1 233 aa15.19■□□□□ 0.02
NELFCD-209ENST00000486263 CPB2Q96IY4 423 aa15.19■□□□□ 0.02
NELFCD-209ENST00000486263 ACO2Q99798 780 aaKnown RBP15.19■□□□□ 0.02
NELFCD-209ENST00000486263 BPIFA3Q9BQP9 254 aa15.19■□□□□ 0.02
NELFCD-209ENST00000486263 AGPAT3Q9NRZ7 376 aa15.19■□□□□ 0.02
NELFCD-209ENST00000486263 ANKFY1Q9P2R3 1169 aa15.19■□□□□ 0.02
NELFCD-209ENST00000486263 ST3GAL5Q9UNP4 418 aa15.19■□□□□ 0.02
NELFCD-209ENST00000486263 PIN4Q9Y237 131 aaKnown RBP15.19■□□□□ 0.02
NELFCD-209ENST00000486263 USP20Q9Y2K6 914 aa15.19■□□□□ 0.02
NELFCD-209ENST00000486263 CNTNAP2Q9UHC6 1331 aa15.18■□□□□ 0.02
NELFCD-209ENST00000486263 TRIM49BA6NDI0 452 aa15.18■□□□□ 0.02
NELFCD-209ENST00000486263 ANKRD63C9JTQ0 380 aa15.18■□□□□ 0.02
NELFCD-209ENST00000486263 CETN3O15182 167 aa15.18■□□□□ 0.02
NELFCD-209ENST00000486263 B4GALT5O43286 388 aa15.18■□□□□ 0.02
NELFCD-209ENST00000486263 TOM1L1O75674 476 aa15.18■□□□□ 0.02
NELFCD-209ENST00000486263 PIGRP01833 764 aa15.18■□□□□ 0.02
NELFCD-209ENST00000486263 HARSP12081 509 aaKnown RBP15.18■□□□□ 0.02
NELFCD-209ENST00000486263 ZSCAN20P17040 1043 aaPredicted RBP15.18■□□□□ 0.02
NELFCD-209ENST00000486263 ARF4P18085 180 aaPredicted RBP15.18■□□□□ 0.02
NELFCD-209ENST00000486263 CD52P31358 61 aa15.18■□□□□ 0.02
NELFCD-209ENST00000486263 CYP2C18P33260 490 aa15.18■□□□□ 0.02
NELFCD-209ENST00000486263 CYP2J2P51589 502 aa15.18■□□□□ 0.02
NELFCD-209ENST00000486263 FKBP3Q00688 224 aaKnown RBP15.18■□□□□ 0.02
NELFCD-209ENST00000486263 MYL5Q02045 173 aa15.18■□□□□ 0.02
NELFCD-209ENST00000486263 LPIN1Q14693 890 aa15.18■□□□□ 0.02
NELFCD-209ENST00000486263 EDRF1Q3B7T1 1238 aa15.18■□□□□ 0.02
NELFCD-209ENST00000486263 SPATA1Q5VX52 437 aa15.18■□□□□ 0.02
NELFCD-209ENST00000486263 CSGALNACT2Q8N6G5 542 aa15.18■□□□□ 0.02
NELFCD-209ENST00000486263 ENOX1Q8TC92 643 aaKnown RBP15.18■□□□□ 0.02
NELFCD-209ENST00000486263 PCIF1Q9H4Z3 704 aa15.18■□□□□ 0.02
NELFCD-209ENST00000486263 CBX8Q9HC52 389 aa15.18■□□□□ 0.02
NELFCD-209ENST00000486263 TBX21Q9UL17 535 aa15.18■□□□□ 0.02
NELFCD-209ENST00000486263 PADI3Q9ULW8 664 aa15.18■□□□□ 0.02
NELFCD-209ENST00000486263 TRAF3IP3Q9Y228 551 aa15.18■□□□□ 0.02
NELFCD-209ENST00000486263 TNFSF13BQ9Y275 285 aa15.18■□□□□ 0.02
NELFCD-209ENST00000486263 LTBP2Q14767 1821 aa15.17■□□□□ 0.02
NELFCD-209ENST00000486263 ZMYM2Q9UBW7 1377 aa15.17■□□□□ 0.02
NELFCD-209ENST00000486263 TRIM43BA6NCK2 446 aa15.17■□□□□ 0.02
NELFCD-209ENST00000486263 TULP1O00294 542 aaPredicted RBP15.17■□□□□ 0.02
NELFCD-209ENST00000486263 TGFB1I1O43294 461 aa15.17■□□□□ 0.02
NELFCD-209ENST00000486263 NR3C1P04150 777 aa15.17■□□□□ 0.02
NELFCD-209ENST00000486263 GARTP22102 1010 aa15.17■□□□□ 0.02
NELFCD-209ENST00000486263 NR2F2P24468 414 aa15.17■□□□□ 0.02
NELFCD-209ENST00000486263 PMS1P54277 932 aaKnown RBP15.17■□□□□ 0.02
NELFCD-209ENST00000486263 ADAM9Q13443 819 aa15.17■□□□□ 0.02
NELFCD-209ENST00000486263 AMHR2Q16671 573 aa15.17■□□□□ 0.02
NELFCD-209ENST00000486263 ZNF568Q3ZCX4 644 aa15.17■□□□□ 0.02
NELFCD-209ENST00000486263 TWF2Q6IBS0 349 aaKnown RBP15.17■□□□□ 0.02
NELFCD-209ENST00000486263 TTI2Q6NXR4 508 aa15.17■□□□□ 0.02
NELFCD-209ENST00000486263 FOXR2Q6PJQ5 311 aa15.17■□□□□ 0.02
NELFCD-209ENST00000486263 MPZL3Q6UWV2 235 aa15.17■□□□□ 0.02
NELFCD-209ENST00000486263 ZBTB33Q86T24 672 aa15.17■□□□□ 0.02
NELFCD-209ENST00000486263 RNF214Q8ND24 703 aa15.17■□□□□ 0.02
NELFCD-209ENST00000486263 TRIM43Q96BQ3 446 aaPredicted RBP15.17■□□□□ 0.02
NELFCD-209ENST00000486263 MSTO1Q9BUK6 570 aa15.17■□□□□ 0.02
NELFCD-209ENST00000486263 SRRTQ9BXP5 876 aaKnown RBP15.17■□□□□ 0.02
NELFCD-209ENST00000486263 IFIH1Q9BYX4 1025 aaKnown RBP15.17■□□□□ 0.02
NELFCD-209ENST00000486263 TRIM6Q9C030 488 aaPredicted RBP15.17■□□□□ 0.02
NELFCD-209ENST00000486263 UBE2OQ9C0C9 1292 aaKnown RBP15.17■□□□□ 0.02
NELFCD-209ENST00000486263 IKZF4Q9H2S9 585 aa15.17■□□□□ 0.02
NELFCD-209ENST00000486263 CHST12Q9NRB3 414 aa15.17■□□□□ 0.02
NELFCD-209ENST00000486263 AGPAT5Q9NUQ2 364 aa15.17■□□□□ 0.02
NELFCD-209ENST00000486263 MAGEC2Q9UBF1 373 aaPredicted RBP15.17■□□□□ 0.02
NELFCD-209ENST00000486263 FRMD4BQ9Y2L6 1034 aa15.17■□□□□ 0.02
NELFCD-209ENST00000486263 UMODL1Q5DID0 1318 aa15.17■□□□□ 0.02
NELFCD-209ENST00000486263 IKBKBO14920 756 aa15.16■□□□□ 0.02
NELFCD-209ENST00000486263 KIAA0391O15091 583 aaKnown RBP15.16■□□□□ 0.02
NELFCD-209ENST00000486263 EXOC3O60645 756 aa15.16■□□□□ 0.02
NELFCD-209ENST00000486263 LDHAP00338 332 aaKnown RBP15.16■□□□□ 0.02
NELFCD-209ENST00000486263 TIMP1P01033 207 aa15.16■□□□□ 0.02
NELFCD-209ENST00000486263 EDN1P05305 212 aa15.16■□□□□ 0.02
NELFCD-209ENST00000486263 RFC2P35250 354 aa15.16■□□□□ 0.02
NELFCD-209ENST00000486263 NOLC1Q14978 699 aaKnown RBP eCLIP15.16■□□□□ 0.02
NELFCD-209ENST00000486263 DCAF4L1Q3SXM0 396 aa15.16■□□□□ 0.02
NELFCD-209ENST00000486263 CEP135Q66GS9 1140 aa15.16■□□□□ 0.02
NELFCD-209ENST00000486263 SLC27A1Q6PCB7 646 aa15.16■□□□□ 0.02
NELFCD-209ENST00000486263 TRAF7Q6Q0C0 670 aa15.16■□□□□ 0.02
NELFCD-209ENST00000486263 CREBRFQ8IUR6 639 aa15.16■□□□□ 0.02
NELFCD-209ENST00000486263 FAM114A1Q8IWE2 563 aa15.16■□□□□ 0.02
NELFCD-209ENST00000486263 TMEM199Q8N511 208 aa15.16■□□□□ 0.02
NELFCD-209ENST00000486263 SEPT8Q92599 483 aa15.16■□□□□ 0.02
NELFCD-209ENST00000486263 CCDC51Q96ER9 411 aa15.16■□□□□ 0.02
NELFCD-209ENST00000486263 SCLYQ96I15 445 aa15.16■□□□□ 0.02
NELFCD-209ENST00000486263 ZBTB45Q96K62 511 aaPredicted RBP15.16■□□□□ 0.02
NELFCD-209ENST00000486263 AGO3Q9H9G7 860 aaKnown RBP15.16■□□□□ 0.02
NELFCD-209ENST00000486263 ERVK-5Q9HDB9 667 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms