RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 ZP2Q05996 745 aa20.37■□□□□ 0.85
PRPF40A-209ENST00000486100 KCNC3Q14003 757 aa20.37■□□□□ 0.85
PRPF40A-209ENST00000486100 FAM187BQ17R55 369 aa20.37■□□□□ 0.85
PRPF40A-209ENST00000486100 SLC27A1Q6PCB7 646 aa20.37■□□□□ 0.85
PRPF40A-209ENST00000486100 HACE1Q8IYU2 909 aa20.37■□□□□ 0.85
PRPF40A-209ENST00000486100 VPS52Q8N1B4 723 aa20.37■□□□□ 0.85
PRPF40A-209ENST00000486100 SMRP1Q8NCR6 262 aa20.37■□□□□ 0.85
PRPF40A-209ENST00000486100 VN1R2Q8NFZ6 395 aa20.37■□□□□ 0.85
PRPF40A-209ENST00000486100 BSNDQ8WZ55 320 aa20.37■□□□□ 0.85
PRPF40A-209ENST00000486100 TMEM175Q9BSA9 504 aa20.37■□□□□ 0.85
PRPF40A-209ENST00000486100 EPHX3Q9H6B9 360 aa20.37■□□□□ 0.85
PRPF40A-209ENST00000486100 DNM3Q9UQ16 869 aa20.37■□□□□ 0.85
PRPF40A-209ENST00000486100 GIT1Q9Y2X7 761 aa20.37■□□□□ 0.85
PRPF40A-209ENST00000486100 HES2Q9Y543 173 aa20.37■□□□□ 0.85
PRPF40A-209ENST00000486100 NCOR1O75376 2440 aa20.37■□□□□ 0.85
PRPF40A-209ENST00000486100 BDP1A6H8Y1 2624 aa20.36■□□□□ 0.85
PRPF40A-209ENST00000486100 ATG2AQ2TAZ0 1938 aa20.36■□□□□ 0.85
PRPF40A-209ENST00000486100 C2orf71A6NGG8 1288 aa20.36■□□□□ 0.85
PRPF40A-209ENST00000486100 ARL5CA6NH57 179 aa20.36■□□□□ 0.85
PRPF40A-209ENST00000486100 C19orf67A6NJJ6 358 aa20.36■□□□□ 0.85
PRPF40A-209ENST00000486100 PP2D1A8MPX8 630 aa20.36■□□□□ 0.85
PRPF40A-209ENST00000486100 B4GALT3O60512 393 aa20.36■□□□□ 0.85
PRPF40A-209ENST00000486100 CDC25AP30304 524 aa20.36■□□□□ 0.85
PRPF40A-209ENST00000486100 NAMPTP43490 491 aa20.36■□□□□ 0.85
PRPF40A-209ENST00000486100 RBM10P98175 930 aaKnown RBP20.36■□□□□ 0.85
PRPF40A-209ENST00000486100 PPP2R5AQ15172 486 aa20.36■□□□□ 0.85
PRPF40A-209ENST00000486100 CDR2LQ86X02 465 aaPredicted RBP20.36■□□□□ 0.85
PRPF40A-209ENST00000486100 KHSRPQ92945 711 aaKnown RBP eCLIP20.36■□□□□ 0.85
PRPF40A-209ENST00000486100 GAD1Q99259 594 aa20.36■□□□□ 0.85
PRPF40A-209ENST00000486100 C1QTNF1Q9BXJ1 281 aa20.36■□□□□ 0.85
PRPF40A-209ENST00000486100 BACH2Q9BYV9 841 aa20.36■□□□□ 0.85
PRPF40A-209ENST00000486100 FAN1Q9Y2M0 1017 aa20.36■□□□□ 0.85
PRPF40A-209ENST00000486100 ARID2Q68CP9 1835 aa20.36■□□□□ 0.85
PRPF40A-209ENST00000486100 E9PMD0 336 aa20.35■□□□□ 0.85
PRPF40A-209ENST00000486100 NPTXRO95502 500 aa20.35■□□□□ 0.85
PRPF40A-209ENST00000486100 SRGAP2BP0DMP2 458 aa20.35■□□□□ 0.85
PRPF40A-209ENST00000486100 CUL4AQ13619 759 aa20.35■□□□□ 0.85
PRPF40A-209ENST00000486100 DEPTORQ8TB45 409 aa20.35■□□□□ 0.85
PRPF40A-209ENST00000486100 BCL7CQ8WUZ0 217 aaPredicted RBP20.35■□□□□ 0.85
PRPF40A-209ENST00000486100 KIFAP3Q92845 792 aa20.35■□□□□ 0.85
PRPF40A-209ENST00000486100 IFT74Q96LB3 600 aa20.35■□□□□ 0.85
PRPF40A-209ENST00000486100 MMTAG2Q9BU76 263 aaKnown RBP20.35■□□□□ 0.85
PRPF40A-209ENST00000486100 ZBP1Q9H171 429 aa20.35■□□□□ 0.85
PRPF40A-209ENST00000486100 POLD4Q9HCU8 107 aa20.35■□□□□ 0.85
PRPF40A-209ENST00000486100 MIOSQ9NXC5 875 aa20.35■□□□□ 0.85
PRPF40A-209ENST00000486100 STK39Q9UEW8 545 aa20.35■□□□□ 0.85
PRPF40A-209ENST00000486100 IRAK3Q9Y616 596 aa20.35■□□□□ 0.85
PRPF40A-209ENST00000486100 PI4K2BG5E9Z4 385 aa20.34■□□□□ 0.85
PRPF40A-209ENST00000486100 NRP1O14786 923 aa20.34■□□□□ 0.85
PRPF40A-209ENST00000486100 CTSAP10619 480 aa20.34■□□□□ 0.85
PRPF40A-209ENST00000486100 MLH1P40692 756 aa20.34■□□□□ 0.85
PRPF40A-209ENST00000486100 GIT2Q14161 759 aa20.34■□□□□ 0.85
PRPF40A-209ENST00000486100 MAPK6Q16659 721 aa20.34■□□□□ 0.85
PRPF40A-209ENST00000486100 ARL6IP4Q66PJ3 421 aaKnown RBP20.34■□□□□ 0.85
PRPF40A-209ENST00000486100 POP1Q99575 1024 aaKnown RBP20.34■□□□□ 0.85
PRPF40A-209ENST00000486100 APOL6Q9BWW8 343 aa20.34■□□□□ 0.85
PRPF40A-209ENST00000486100 NXF3Q9H4D5 531 aaKnown RBP20.34■□□□□ 0.85
PRPF40A-209ENST00000486100 ACKR2O00590 384 aa20.33■□□□□ 0.85
PRPF40A-209ENST00000486100 CLASP2O75122 1294 aaKnown RBP20.33■□□□□ 0.85
PRPF40A-209ENST00000486100 PRKCBP05771 671 aa20.33■□□□□ 0.85
PRPF40A-209ENST00000486100 AKAP5P24588 427 aa20.33■□□□□ 0.85
PRPF40A-209ENST00000486100 CA8P35219 290 aa20.33■□□□□ 0.85
PRPF40A-209ENST00000486100 PRPF4BQ13523 1007 aaKnown RBP20.33■□□□□ 0.85
PRPF40A-209ENST00000486100 ANKRD54Q6NXT1 300 aa20.33■□□□□ 0.85
PRPF40A-209ENST00000486100 LLGL2Q6P1M3 1020 aa20.33■□□□□ 0.85
PRPF40A-209ENST00000486100 COLGALT2Q8IYK4 626 aa20.33■□□□□ 0.85
PRPF40A-209ENST00000486100 KCTD17Q8N5Z5 321 aa20.33■□□□□ 0.85
PRPF40A-209ENST00000486100 ZFP42Q96MM3 310 aa20.33■□□□□ 0.85
PRPF40A-209ENST00000486100 CCDC113Q9H0I3 377 aa20.33■□□□□ 0.85
PRPF40A-209ENST00000486100 PARP2Q9UGN5 583 aa20.33■□□□□ 0.85
PRPF40A-209ENST00000486100 TTLL13PA6NNM8 815 aa20.32■□□□□ 0.84
PRPF40A-209ENST00000486100 N4BP3O15049 544 aa20.32■□□□□ 0.84
PRPF40A-209ENST00000486100 HOXB8P17481 243 aaPredicted RBP20.32■□□□□ 0.84
PRPF40A-209ENST00000486100 SCNN1GP51170 649 aa20.32■□□□□ 0.84
PRPF40A-209ENST00000486100 EFNA5P52803 228 aa20.32■□□□□ 0.84
PRPF40A-209ENST00000486100 DSC1Q08554 894 aa20.32■□□□□ 0.84
PRPF40A-209ENST00000486100 HYIQ5T013 277 aa20.32■□□□□ 0.84
PRPF40A-209ENST00000486100 TMEM87AQ8NBN3 555 aa20.32■□□□□ 0.84
PRPF40A-209ENST00000486100 GSTCDQ8NEC7 633 aa20.32■□□□□ 0.84
PRPF40A-209ENST00000486100 AUTS2Q8WXX7 1259 aa20.32■□□□□ 0.84
PRPF40A-209ENST00000486100 CASP10Q92851 521 aa20.32■□□□□ 0.84
PRPF40A-209ENST00000486100 VN1R3Q9BXE9 311 aa20.32■□□□□ 0.84
PRPF40A-209ENST00000486100 S1PR5Q9H228 398 aa20.32■□□□□ 0.84
PRPF40A-209ENST00000486100 PDZD7Q9H5P4 517 aa20.32■□□□□ 0.84
PRPF40A-209ENST00000486100 DAXXQ9UER7 740 aaPredicted RBP20.32■□□□□ 0.84
PRPF40A-209ENST00000486100 USP15Q9Y4E8 981 aaPredicted RBP20.32■□□□□ 0.84
PRPF40A-209ENST00000486100 HCFC2Q9Y5Z7 792 aa20.32■□□□□ 0.84
PRPF40A-209ENST00000486100 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.31■□□□□ 0.84
PRPF40A-209ENST00000486100 VWA3AA6NCI4 1184 aa20.31■□□□□ 0.84
PRPF40A-209ENST00000486100 LIG1P18858 919 aa20.31■□□□□ 0.84
PRPF40A-209ENST00000486100 OR1G1P47890 313 aa20.31■□□□□ 0.84
PRPF40A-209ENST00000486100 TMEM132AQ24JP5 1023 aa20.31■□□□□ 0.84
PRPF40A-209ENST00000486100 RINT1Q6NUQ1 792 aa20.31■□□□□ 0.84
PRPF40A-209ENST00000486100 SYCE2Q6PIF2 218 aa20.31■□□□□ 0.84
PRPF40A-209ENST00000486100 C1orf186Q6ZWK4 172 aa20.31■□□□□ 0.84
PRPF40A-209ENST00000486100 KCNK18Q7Z418 384 aa20.31■□□□□ 0.84
PRPF40A-209ENST00000486100 BRAPQ7Z569 592 aa20.31■□□□□ 0.84
PRPF40A-209ENST00000486100 SUSD6Q92537 303 aa20.31■□□□□ 0.84
PRPF40A-209ENST00000486100 ZMYM2Q9UBW7 1377 aa20.31■□□□□ 0.84
PRPF40A-209ENST00000486100 NR1I2O75469 434 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms