RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 EVPLQ92817 2033 aa15.27■□□□□ 0.04
CLK3-204ENST00000483723 A0A0B4J269 797 aa15.27■□□□□ 0.04
CLK3-204ENST00000483723 A6NJR5 290 aa15.27■□□□□ 0.04
CLK3-204ENST00000483723 H3BRB1 525 aa15.27■□□□□ 0.04
CLK3-204ENST00000483723 RBAK-RBAKDNI3L0D1 243 aa15.27■□□□□ 0.04
CLK3-204ENST00000483723 ZNF263O14978 683 aa15.27■□□□□ 0.04
CLK3-204ENST00000483723 MSCO60682 206 aa15.27■□□□□ 0.04
CLK3-204ENST00000483723 PRKCIP41743 596 aa15.27■□□□□ 0.04
CLK3-204ENST00000483723 CLDN10P78369 228 aa15.27■□□□□ 0.04
CLK3-204ENST00000483723 HSP90AA2PQ14568 343 aaPredicted RBP15.27■□□□□ 0.04
CLK3-204ENST00000483723 SLC9C1Q4G0N8 1177 aa15.27■□□□□ 0.04
CLK3-204ENST00000483723 PRAMEF19Q5SWL8 479 aa15.27■□□□□ 0.04
CLK3-204ENST00000483723 IQCEQ6IPM2 695 aa15.27■□□□□ 0.04
CLK3-204ENST00000483723 IFNLR1Q8IU57 520 aaPredicted RBP15.27■□□□□ 0.04
CLK3-204ENST00000483723 LRRC71Q8N4P6 559 aa15.27■□□□□ 0.04
CLK3-204ENST00000483723 TARS2Q9BW92 718 aaKnown RBP15.27■□□□□ 0.04
CLK3-204ENST00000483723 NFKBIZQ9BYH8 718 aa15.27■□□□□ 0.04
CLK3-204ENST00000483723 TMEM117Q9H0C3 514 aa15.27■□□□□ 0.04
CLK3-204ENST00000483723 INTS2Q9H0H0 1204 aaKnown RBP15.27■□□□□ 0.04
CLK3-204ENST00000483723 C2orf40Q9H1Z8 148 aa15.27■□□□□ 0.04
CLK3-204ENST00000483723 HAUS4Q9H6D7 363 aa15.27■□□□□ 0.04
CLK3-204ENST00000483723 TUT1Q9H6E5 874 aaKnown RBP15.27■□□□□ 0.04
CLK3-204ENST00000483723 AJAP1Q9UKB5 411 aaPredicted RBP15.27■□□□□ 0.04
CLK3-204ENST00000483723 ZNF233A6NK53 670 aa15.26■□□□□ 0.03
CLK3-204ENST00000483723 FANCGO15287 622 aa15.26■□□□□ 0.03
CLK3-204ENST00000483723 LDHAP00338 332 aaKnown RBP15.26■□□□□ 0.03
CLK3-204ENST00000483723 KLRC1P26715 233 aa15.26■□□□□ 0.03
CLK3-204ENST00000483723 CTGFP29279 349 aa15.26■□□□□ 0.03
CLK3-204ENST00000483723 CCL14Q16627 93 aa15.26■□□□□ 0.03
CLK3-204ENST00000483723 DGKDQ16760 1214 aa15.26■□□□□ 0.03
CLK3-204ENST00000483723 CRELD2Q6UXH1 353 aaPredicted RBP15.26■□□□□ 0.03
CLK3-204ENST00000483723 MYRIPQ8NFW9 859 aa15.26■□□□□ 0.03
CLK3-204ENST00000483723 APBA2Q99767 749 aa15.26■□□□□ 0.03
CLK3-204ENST00000483723 STK33Q9BYT3 514 aa15.26■□□□□ 0.03
CLK3-204ENST00000483723 FZD8Q9H461 694 aa15.26■□□□□ 0.03
CLK3-204ENST00000483723 ZNF215Q9UL58 517 aaPredicted RBP15.26■□□□□ 0.03
CLK3-204ENST00000483723 Q9Y3F1 56 aa15.26■□□□□ 0.03
CLK3-204ENST00000483723 BZW2Q9Y6E2 419 aaKnown RBP15.26■□□□□ 0.03
CLK3-204ENST00000483723 LRRIQ3A6PVS8 624 aaPredicted RBP15.26■□□□□ 0.03
CLK3-204ENST00000483723 ABL1P00519 1130 aa15.26■□□□□ 0.03
CLK3-204ENST00000483723 CYP2B6P20813 491 aa15.26■□□□□ 0.03
CLK3-204ENST00000483723 RFX1P22670 979 aa15.26■□□□□ 0.03
CLK3-204ENST00000483723 GCLMP48507 274 aa15.26■□□□□ 0.03
CLK3-204ENST00000483723 KIF11P52732 1056 aa15.26■□□□□ 0.03
CLK3-204ENST00000483723 PTENP60484 403 aa15.26■□□□□ 0.03
CLK3-204ENST00000483723 CETN1Q12798 172 aa15.26■□□□□ 0.03
CLK3-204ENST00000483723 RAPGEF1Q13905 1077 aa15.26■□□□□ 0.03
CLK3-204ENST00000483723 TFDP1Q14186 410 aa15.26■□□□□ 0.03
CLK3-204ENST00000483723 PSMD6Q15008 389 aa15.26■□□□□ 0.03
CLK3-204ENST00000483723 ASIC2Q16515 512 aa15.26■□□□□ 0.03
CLK3-204ENST00000483723 USP37Q86T82 979 aa15.26■□□□□ 0.03
CLK3-204ENST00000483723 ZBTB8OSQ8IWT0 167 aa15.26■□□□□ 0.03
CLK3-204ENST00000483723 RNF149Q8NC42 400 aa15.26■□□□□ 0.03
CLK3-204ENST00000483723 ZNF592Q92610 1267 aa15.26■□□□□ 0.03
CLK3-204ENST00000483723 VTI1AQ96AJ9 217 aa15.26■□□□□ 0.03
CLK3-204ENST00000483723 ZBTB45Q96K62 511 aaPredicted RBP15.26■□□□□ 0.03
CLK3-204ENST00000483723 TMEM8AQ9HCN3 771 aa15.26■□□□□ 0.03
CLK3-204ENST00000483723 LZTFL1Q9NQ48 299 aa15.26■□□□□ 0.03
CLK3-204ENST00000483723 MYO1AQ9UBC5 1043 aa15.26■□□□□ 0.03
CLK3-204ENST00000483723 APEX2Q9UBZ4 518 aa15.26■□□□□ 0.03
CLK3-204ENST00000483723 DNAI1Q9UI46 699 aa15.26■□□□□ 0.03
CLK3-204ENST00000483723 DNAJC12Q9UKB3 198 aa15.26■□□□□ 0.03
CLK3-204ENST00000483723 AGO2Q9UKV8 859 aaKnown RBP15.26■□□□□ 0.03
CLK3-204ENST00000483723 ZSWIM8A7E2V4 1837 aa15.25■□□□□ 0.03
CLK3-204ENST00000483723 RIOK3O14730 519 aaKnown RBP15.25■□□□□ 0.03
CLK3-204ENST00000483723 TNPO2O14787 897 aaKnown RBP15.25■□□□□ 0.03
CLK3-204ENST00000483723 DYNC1LI2O43237 492 aaPredicted RBP15.25■□□□□ 0.03
CLK3-204ENST00000483723 ALDH1A1P00352 501 aa15.25■□□□□ 0.03
CLK3-204ENST00000483723 ZNF286BP0CG31 522 aa15.25■□□□□ 0.03
CLK3-204ENST00000483723 SRGAP2CP0DJJ0 459 aa15.25■□□□□ 0.03
CLK3-204ENST00000483723 CLCN3P51790 818 aa15.25■□□□□ 0.03
CLK3-204ENST00000483723 VAV2P52735 878 aa15.25■□□□□ 0.03
CLK3-204ENST00000483723 GNG11P61952 73 aa15.25■□□□□ 0.03
CLK3-204ENST00000483723 KRT39Q6A163 491 aa15.25■□□□□ 0.03
CLK3-204ENST00000483723 PHLDB3Q6NSJ2 640 aa15.25■□□□□ 0.03
CLK3-204ENST00000483723 GJB7Q6PEY0 223 aa15.25■□□□□ 0.03
CLK3-204ENST00000483723 C15orf39Q6ZRI6 1047 aa15.25■□□□□ 0.03
CLK3-204ENST00000483723 RHPN2Q8IUC4 686 aa15.25■□□□□ 0.03
CLK3-204ENST00000483723 SPAG5Q96R06 1193 aa15.25■□□□□ 0.03
CLK3-204ENST00000483723 WDR24Q96S15 920 aa15.25■□□□□ 0.03
CLK3-204ENST00000483723 ACO2Q99798 780 aaKnown RBP15.25■□□□□ 0.03
CLK3-204ENST00000483723 FAM213AQ9BRX8 229 aa15.25■□□□□ 0.03
CLK3-204ENST00000483723 MRPL4Q9BYD3 311 aaKnown RBP15.25■□□□□ 0.03
CLK3-204ENST00000483723 IRX2Q9BZI1 471 aaPredicted RBP15.25■□□□□ 0.03
CLK3-204ENST00000483723 L2HGDHQ9H9P8 463 aa15.25■□□□□ 0.03
CLK3-204ENST00000483723 ABLIM1O14639 778 aa15.24■□□□□ 0.03
CLK3-204ENST00000483723 AKR1B10O60218 316 aa15.24■□□□□ 0.03
CLK3-204ENST00000483723 IPO7O95373 1038 aaKnown RBP15.24■□□□□ 0.03
CLK3-204ENST00000483723 ANXA13P27216 316 aa15.24■□□□□ 0.03
CLK3-204ENST00000483723 CYP2C19P33261 490 aa15.24■□□□□ 0.03
CLK3-204ENST00000483723 GTF2F1P35269 517 aaKnown RBP eCLIP15.24■□□□□ 0.03
CLK3-204ENST00000483723 STAT1P42224 750 aa15.24■□□□□ 0.03
CLK3-204ENST00000483723 MXI1P50539 228 aa15.24■□□□□ 0.03
CLK3-204ENST00000483723 KLHL30Q0D2K2 578 aa15.24■□□□□ 0.03
CLK3-204ENST00000483723 SPA17Q15506 151 aa15.24■□□□□ 0.03
CLK3-204ENST00000483723 MAPK6Q16659 721 aa15.24■□□□□ 0.03
CLK3-204ENST00000483723 FAM187BQ17R55 369 aa15.24■□□□□ 0.03
CLK3-204ENST00000483723 ARHGAP29Q52LW3 1261 aa15.24■□□□□ 0.03
CLK3-204ENST00000483723 MTHFD1LQ6UB35 978 aa15.24■□□□□ 0.03
CLK3-204ENST00000483723 GPR88Q9GZN0 384 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms