RNA–Protein interactions for RNA: ENST00000482478.5

COL16A1-212, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 797 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-212ENST00000482478 ADAM15Q13444 863 aa17.34■□□□□ 0.37
COL16A1-212ENST00000482478 MAPK6Q16659 721 aa17.34■□□□□ 0.37
COL16A1-212ENST00000482478 PPP4R3CPQ6ZMV5 832 aa17.34■□□□□ 0.37
COL16A1-212ENST00000482478 MRPL10Q7Z7H8 261 aaKnown RBP17.34■□□□□ 0.37
COL16A1-212ENST00000482478 GJD3Q8N144 294 aa17.34■□□□□ 0.37
COL16A1-212ENST00000482478 RASSF8Q8NHQ8 419 aa17.34■□□□□ 0.37
COL16A1-212ENST00000482478 KIFAP3Q92845 792 aa17.34■□□□□ 0.37
COL16A1-212ENST00000482478 GAD1Q99259 594 aa17.34■□□□□ 0.37
COL16A1-212ENST00000482478 KANSL3Q9P2N6 904 aa17.34■□□□□ 0.37
COL16A1-212ENST00000482478 PRG3Q9Y2Y8 225 aaPredicted RBP17.34■□□□□ 0.37
COL16A1-212ENST00000482478 E9PMD0 336 aa17.33■□□□□ 0.36
COL16A1-212ENST00000482478 N4BP3O15049 544 aa17.33■□□□□ 0.36
COL16A1-212ENST00000482478 MBTPS2O43462 519 aa17.33■□□□□ 0.36
COL16A1-212ENST00000482478 B4GALT3O60512 393 aa17.33■□□□□ 0.36
COL16A1-212ENST00000482478 SSBP05455 408 aaKnown RBP eCLIP17.33■□□□□ 0.36
COL16A1-212ENST00000482478 CDC25AP30304 524 aa17.33■□□□□ 0.36
COL16A1-212ENST00000482478 RBM10P98175 930 aaKnown RBP17.33■□□□□ 0.36
COL16A1-212ENST00000482478 DMP1Q13316 513 aaPredicted RBP17.33■□□□□ 0.36
COL16A1-212ENST00000482478 PRPF4BQ13523 1007 aaKnown RBP17.33■□□□□ 0.36
COL16A1-212ENST00000482478 PDIA5Q14554 519 aa17.33■□□□□ 0.36
COL16A1-212ENST00000482478 ZNF280BQ86YH2 543 aa17.33■□□□□ 0.36
COL16A1-212ENST00000482478 FAM178BQ8IXR5 827 aa17.33■□□□□ 0.36
COL16A1-212ENST00000482478 VPS52Q8N1B4 723 aa17.33■□□□□ 0.36
COL16A1-212ENST00000482478 BCL7CQ8WUZ0 217 aaPredicted RBP17.33■□□□□ 0.36
COL16A1-212ENST00000482478 IGSF21Q96ID5 467 aa17.33■□□□□ 0.36
COL16A1-212ENST00000482478 ZFP42Q96MM3 310 aa17.33■□□□□ 0.36
COL16A1-212ENST00000482478 POP1Q99575 1024 aaKnown RBP17.33■□□□□ 0.36
COL16A1-212ENST00000482478 ADPGKQ9BRR6 497 aa17.33■□□□□ 0.36
COL16A1-212ENST00000482478 ZBP1Q9H171 429 aa17.33■□□□□ 0.36
COL16A1-212ENST00000482478 PARP2Q9UGN5 583 aa17.33■□□□□ 0.36
COL16A1-212ENST00000482478 DNM3Q9UQ16 869 aa17.33■□□□□ 0.36
COL16A1-212ENST00000482478 PHLPP2Q6ZVD8 1323 aa17.32■□□□□ 0.36
COL16A1-212ENST00000482478 ARL5CA6NH57 179 aa17.32■□□□□ 0.36
COL16A1-212ENST00000482478 EYA4O95677 639 aa17.32■□□□□ 0.36
COL16A1-212ENST00000482478 GALTP07902 379 aa17.32■□□□□ 0.36
COL16A1-212ENST00000482478 PDCP20941 246 aa17.32■□□□□ 0.36
COL16A1-212ENST00000482478 AKAP5P24588 427 aa17.32■□□□□ 0.36
COL16A1-212ENST00000482478 AFF1P51825 1210 aaKnown RBP17.32■□□□□ 0.36
COL16A1-212ENST00000482478 ZP2Q05996 745 aa17.32■□□□□ 0.36
COL16A1-212ENST00000482478 SMAD2Q15796 467 aaKnown RBP17.32■□□□□ 0.36
COL16A1-212ENST00000482478 IL17AQ16552 155 aa17.32■□□□□ 0.36
COL16A1-212ENST00000482478 BRAPQ7Z569 592 aa17.32■□□□□ 0.36
COL16A1-212ENST00000482478 SMRP1Q8NCR6 262 aa17.32■□□□□ 0.36
COL16A1-212ENST00000482478 VN1R2Q8NFZ6 395 aa17.32■□□□□ 0.36
COL16A1-212ENST00000482478 AUTS2Q8WXX7 1259 aa17.32■□□□□ 0.36
COL16A1-212ENST00000482478 TMEM175Q9BSA9 504 aa17.32■□□□□ 0.36
COL16A1-212ENST00000482478 BACH2Q9BYV9 841 aa17.32■□□□□ 0.36
COL16A1-212ENST00000482478 CLEC1BQ9P126 229 aa17.32■□□□□ 0.36
COL16A1-212ENST00000482478 NCOR1O75376 2440 aa17.32■□□□□ 0.36
COL16A1-212ENST00000482478 C2orf71A6NGG8 1288 aa17.31■□□□□ 0.36
COL16A1-212ENST00000482478 SPDYE4A6NLX3 237 aa17.31■□□□□ 0.36
COL16A1-212ENST00000482478 CCDC169A6NNP5 214 aa17.31■□□□□ 0.36
COL16A1-212ENST00000482478 OR1G1P47890 313 aa17.31■□□□□ 0.36
COL16A1-212ENST00000482478 COASYQ13057 564 aa17.31■□□□□ 0.36
COL16A1-212ENST00000482478 ADHFE1Q8IWW8 467 aa17.31■□□□□ 0.36
COL16A1-212ENST00000482478 MSLNLQ96KJ4 702 aa17.31■□□□□ 0.36
COL16A1-212ENST00000482478 DRC1Q96MC2 740 aa17.31■□□□□ 0.36
COL16A1-212ENST00000482478 RUSC1Q9BVN2 902 aa17.31■□□□□ 0.36
COL16A1-212ENST00000482478 NT5C3AQ9H0P0 336 aa17.31■□□□□ 0.36
COL16A1-212ENST00000482478 RNF39Q9H2S5 420 aa17.31■□□□□ 0.36
COL16A1-212ENST00000482478 PDZD7Q9H5P4 517 aa17.31■□□□□ 0.36
COL16A1-212ENST00000482478 POLD4Q9HCU8 107 aa17.31■□□□□ 0.36
COL16A1-212ENST00000482478 PRKAG3Q9UGI9 489 aa17.31■□□□□ 0.36
COL16A1-212ENST00000482478 GIT1Q9Y2X7 761 aa17.31■□□□□ 0.36
COL16A1-212ENST00000482478 USP15Q9Y4E8 981 aaPredicted RBP17.31■□□□□ 0.36
COL16A1-212ENST00000482478 ZMYM2Q9UBW7 1377 aa17.3■□□□□ 0.36
COL16A1-212ENST00000482478 A0A1B0GUA9 196 aa17.3■□□□□ 0.36
COL16A1-212ENST00000482478 HIP1RO75146 1068 aa17.3■□□□□ 0.36
COL16A1-212ENST00000482478 NR1I2O75469 434 aa17.3■□□□□ 0.36
COL16A1-212ENST00000482478 DDHD2O94830 711 aa17.3■□□□□ 0.36
COL16A1-212ENST00000482478 BMP15O95972 392 aa17.3■□□□□ 0.36
COL16A1-212ENST00000482478 URODP06132 367 aa17.3■□□□□ 0.36
COL16A1-212ENST00000482478 GRIK3Q13003 919 aa17.3■□□□□ 0.36
COL16A1-212ENST00000482478 CUL4AQ13619 759 aa17.3■□□□□ 0.36
COL16A1-212ENST00000482478 FAM187BQ17R55 369 aa17.3■□□□□ 0.36
COL16A1-212ENST00000482478 ARL6IP4Q66PJ3 421 aaKnown RBP17.3■□□□□ 0.36
COL16A1-212ENST00000482478 DDX53Q86TM3 631 aaKnown RBP17.3■□□□□ 0.36
COL16A1-212ENST00000482478 CASP10Q92851 521 aa17.3■□□□□ 0.36
COL16A1-212ENST00000482478 PLIN2Q99541 437 aa17.3■□□□□ 0.36
COL16A1-212ENST00000482478 APOL5Q9BWW9 433 aa17.3■□□□□ 0.36
COL16A1-212ENST00000482478 CCDC113Q9H0I3 377 aa17.3■□□□□ 0.36
COL16A1-212ENST00000482478 FOXD4L1Q9NU39 408 aa17.3■□□□□ 0.36
COL16A1-212ENST00000482478 KLK14Q9P0G3 267 aa17.3■□□□□ 0.36
COL16A1-212ENST00000482478 FAN1Q9Y2M0 1017 aa17.3■□□□□ 0.36
COL16A1-212ENST00000482478 HCFC2Q9Y5Z7 792 aa17.3■□□□□ 0.36
COL16A1-212ENST00000482478 CTSAP10619 480 aa17.29■□□□□ 0.36
COL16A1-212ENST00000482478 EFNA5P52803 228 aa17.29■□□□□ 0.36
COL16A1-212ENST00000482478 PEX3P56589 373 aa17.29■□□□□ 0.36
COL16A1-212ENST00000482478 RAD51AP2Q09MP3 1159 aa17.29■□□□□ 0.36
COL16A1-212ENST00000482478 GIT2Q14161 759 aa17.29■□□□□ 0.36
COL16A1-212ENST00000482478 DCAF4L1Q3SXM0 396 aa17.29■□□□□ 0.36
COL16A1-212ENST00000482478 KCNK18Q7Z418 384 aa17.29■□□□□ 0.36
COL16A1-212ENST00000482478 APBB1IPQ7Z5R6 666 aaPredicted RBP17.29■□□□□ 0.36
COL16A1-212ENST00000482478 CABP7Q86V35 215 aa17.29■□□□□ 0.36
COL16A1-212ENST00000482478 MMTAG2Q9BU76 263 aaKnown RBP17.29■□□□□ 0.36
COL16A1-212ENST00000482478 C1QTNF1Q9BXJ1 281 aa17.29■□□□□ 0.36
COL16A1-212ENST00000482478 FZD8Q9H461 694 aa17.29■□□□□ 0.36
COL16A1-212ENST00000482478 CD320Q9NPF0 282 aa17.29■□□□□ 0.36
COL16A1-212ENST00000482478 MARCH5Q9NX47 278 aa17.29■□□□□ 0.36
COL16A1-212ENST00000482478 STK39Q9UEW8 545 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms