RNA–Protein interactions for RNA: ENST00000481281.5

HDAC1-207, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-207ENST00000481281 LEXMQ3ZCV2 418 aa14.39□□□□□ -0.11
HDAC1-207ENST00000481281 PDE12Q6L8Q7 609 aaKnown RBP14.39□□□□□ -0.11
HDAC1-207ENST00000481281 CDR2LQ86X02 465 aaPredicted RBP14.39□□□□□ -0.11
HDAC1-207ENST00000481281 URGCPQ8TCY9 931 aa14.39□□□□□ -0.11
HDAC1-207ENST00000481281 ADAMTS19Q8TE59 1207 aa14.39□□□□□ -0.11
HDAC1-207ENST00000481281 LRRC15Q8TF66 581 aa14.39□□□□□ -0.11
HDAC1-207ENST00000481281 PPP2R3CQ969Q6 453 aa14.39□□□□□ -0.11
HDAC1-207ENST00000481281 CALML4Q96GE6 196 aa14.39□□□□□ -0.11
HDAC1-207ENST00000481281 TRIM6Q9C030 488 aaPredicted RBP14.39□□□□□ -0.11
HDAC1-207ENST00000481281 PDZD7Q9H5P4 517 aa14.39□□□□□ -0.11
HDAC1-207ENST00000481281 KANSL3Q9P2N6 904 aa14.39□□□□□ -0.11
HDAC1-207ENST00000481281 FBXO2Q9UK22 296 aaPredicted RBP14.39□□□□□ -0.11
HDAC1-207ENST00000481281 PCDHGC5Q9Y5F6 944 aa14.39□□□□□ -0.11
HDAC1-207ENST00000481281 PHLPP2Q6ZVD8 1323 aa14.39□□□□□ -0.11
HDAC1-207ENST00000481281 XIRP2A4UGR9 3374 aa14.39□□□□□ -0.11
HDAC1-207ENST00000481281 VCANP13611 3396 aa14.39□□□□□ -0.11
HDAC1-207ENST00000481281 ARL5CA6NH57 179 aa14.38□□□□□ -0.11
HDAC1-207ENST00000481281 N4BP3O15049 544 aa14.38□□□□□ -0.11
HDAC1-207ENST00000481281 NPTXRO95502 500 aa14.38□□□□□ -0.11
HDAC1-207ENST00000481281 GALTP07902 379 aa14.38□□□□□ -0.11
HDAC1-207ENST00000481281 PLA2G4BP0C869 781 aa14.38□□□□□ -0.11
HDAC1-207ENST00000481281 GTF2F1P35269 517 aaKnown RBP eCLIP14.38□□□□□ -0.11
HDAC1-207ENST00000481281 LTBRP36941 435 aa14.38□□□□□ -0.11
HDAC1-207ENST00000481281 MLH1P40692 756 aa14.38□□□□□ -0.11
HDAC1-207ENST00000481281 PEX3P56589 373 aa14.38□□□□□ -0.11
HDAC1-207ENST00000481281 KRT17Q04695 432 aa14.38□□□□□ -0.11
HDAC1-207ENST00000481281 RNASELQ05823 741 aaKnown RBP14.38□□□□□ -0.11
HDAC1-207ENST00000481281 DMP1Q13316 513 aaPredicted RBP14.38□□□□□ -0.11
HDAC1-207ENST00000481281 TMEM173Q86WV6 379 aaPredicted RBP14.38□□□□□ -0.11
HDAC1-207ENST00000481281 ZNF280BQ86YH2 543 aa14.38□□□□□ -0.11
HDAC1-207ENST00000481281 HACE1Q8IYU2 909 aa14.38□□□□□ -0.11
HDAC1-207ENST00000481281 USP28Q96RU2 1077 aa14.38□□□□□ -0.11
HDAC1-207ENST00000481281 GAD1Q99259 594 aa14.38□□□□□ -0.11
HDAC1-207ENST00000481281 CCSER1Q9C0I3 900 aa14.38□□□□□ -0.11
HDAC1-207ENST00000481281 BLOC1S4Q9NUP1 217 aa14.38□□□□□ -0.11
HDAC1-207ENST00000481281 CLDND1Q9NY35 253 aa14.38□□□□□ -0.11
HDAC1-207ENST00000481281 ARHGAP28Q9P2N2 729 aa14.38□□□□□ -0.11
HDAC1-207ENST00000481281 DNAJB4Q9UDY4 337 aa14.38□□□□□ -0.11
HDAC1-207ENST00000481281 DAXXQ9UER7 740 aaPredicted RBP14.38□□□□□ -0.11
HDAC1-207ENST00000481281 PUF60Q9UHX1 559 aaKnown RBP14.38□□□□□ -0.11
HDAC1-207ENST00000481281 GIT1Q9Y2X7 761 aa14.38□□□□□ -0.11
HDAC1-207ENST00000481281 SPTBN5Q9NRC6 3674 aaKnown RBP14.37□□□□□ -0.11
HDAC1-207ENST00000481281 NT5C1B-RDH14C9J2C7 533 aa14.37□□□□□ -0.11
HDAC1-207ENST00000481281 TBX10O75333 385 aa14.37□□□□□ -0.11
HDAC1-207ENST00000481281 DDHD2O94830 711 aa14.37□□□□□ -0.11
HDAC1-207ENST00000481281 POMCP01189 267 aa14.37□□□□□ -0.11
HDAC1-207ENST00000481281 SSBP05455 408 aaKnown RBP eCLIP14.37□□□□□ -0.11
HDAC1-207ENST00000481281 PDIA4P13667 645 aaKnown RBP14.37□□□□□ -0.11
HDAC1-207ENST00000481281 PLCG1P19174 1290 aa14.37□□□□□ -0.11
HDAC1-207ENST00000481281 MARCKSP29966 332 aaPredicted RBP14.37□□□□□ -0.11
HDAC1-207ENST00000481281 SLC11A1P49279 550 aa14.37□□□□□ -0.11
HDAC1-207ENST00000481281 DSC1Q08554 894 aa14.37□□□□□ -0.11
HDAC1-207ENST00000481281 ADAM15Q13444 863 aa14.37□□□□□ -0.11
HDAC1-207ENST00000481281 KARSQ15046 597 aaKnown RBP14.37□□□□□ -0.11
HDAC1-207ENST00000481281 EFHBQ8N7U6 833 aa14.37□□□□□ -0.11
HDAC1-207ENST00000481281 GSTCDQ8NEC7 633 aa14.37□□□□□ -0.11
HDAC1-207ENST00000481281 BCL7CQ8WUZ0 217 aaPredicted RBP14.37□□□□□ -0.11
HDAC1-207ENST00000481281 TMEM169Q96HH4 297 aa14.37□□□□□ -0.11
HDAC1-207ENST00000481281 IGSF21Q96ID5 467 aa14.37□□□□□ -0.11
HDAC1-207ENST00000481281 ZFP42Q96MM3 310 aa14.37□□□□□ -0.11
HDAC1-207ENST00000481281 TCF25Q9BQ70 676 aa14.37□□□□□ -0.11
HDAC1-207ENST00000481281 TMEM175Q9BSA9 504 aa14.37□□□□□ -0.11
HDAC1-207ENST00000481281 NTPCRQ9BSD7 190 aaKnown RBP14.37□□□□□ -0.11
HDAC1-207ENST00000481281 APOL6Q9BWW8 343 aa14.37□□□□□ -0.11
HDAC1-207ENST00000481281 GBP3Q9H0R5 595 aa14.37□□□□□ -0.11
HDAC1-207ENST00000481281 TMEM134Q9H6X4 195 aa14.37□□□□□ -0.11
HDAC1-207ENST00000481281 USP20Q9Y2K6 914 aa14.37□□□□□ -0.11
HDAC1-207ENST00000481281 SRPRBQ9Y5M8 271 aaKnown RBP14.37□□□□□ -0.11
HDAC1-207ENST00000481281 CCDC169A6NNP5 214 aa14.36□□□□□ -0.11
HDAC1-207ENST00000481281 H3BQ06 376 aaPredicted RBP14.36□□□□□ -0.11
HDAC1-207ENST00000481281 K7ERI5 159 aa14.36□□□□□ -0.11
HDAC1-207ENST00000481281 LINC01565O15544 149 aa14.36□□□□□ -0.11
HDAC1-207ENST00000481281 HSP90AA1P07900 732 aaKnown RBP14.36□□□□□ -0.11
HDAC1-207ENST00000481281 PLS3P13797 630 aa14.36□□□□□ -0.11
HDAC1-207ENST00000481281 LIG1P18858 919 aa14.36□□□□□ -0.11
HDAC1-207ENST00000481281 AKAP5P24588 427 aa14.36□□□□□ -0.11
HDAC1-207ENST00000481281 NRIP1P48552 1158 aa14.36□□□□□ -0.11
HDAC1-207ENST00000481281 NASPP49321 788 aaPredicted RBP14.36□□□□□ -0.11
HDAC1-207ENST00000481281 SCNN1GP51170 649 aa14.36□□□□□ -0.11
HDAC1-207ENST00000481281 CEBPZQ03701 1054 aaKnown RBP14.36□□□□□ -0.11
HDAC1-207ENST00000481281 DLX2Q07687 328 aaPredicted RBP14.36□□□□□ -0.11
HDAC1-207ENST00000481281 RAD51AP2Q09MP3 1159 aa14.36□□□□□ -0.11
HDAC1-207ENST00000481281 SLC39A14Q15043 492 aa14.36□□□□□ -0.11
HDAC1-207ENST00000481281 ARSHQ5FYA8 562 aa14.36□□□□□ -0.11
HDAC1-207ENST00000481281 NT5DC1Q5TFE4 455 aa14.36□□□□□ -0.11
HDAC1-207ENST00000481281 EEF1DP3Q658K8 133 aa14.36□□□□□ -0.11
HDAC1-207ENST00000481281 USP49Q70CQ1 688 aa14.36□□□□□ -0.11
HDAC1-207ENST00000481281 TAS1R3Q7RTX0 852 aa14.36□□□□□ -0.11
HDAC1-207ENST00000481281 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.36□□□□□ -0.11
HDAC1-207ENST00000481281 MICAL1Q8TDZ2 1067 aa14.36□□□□□ -0.11
HDAC1-207ENST00000481281 SPIRE2Q8WWL2 714 aa14.36□□□□□ -0.11
HDAC1-207ENST00000481281 RAD54LQ92698 747 aa14.36□□□□□ -0.11
HDAC1-207ENST00000481281 ADPGKQ9BRR6 497 aa14.36□□□□□ -0.11
HDAC1-207ENST00000481281 NGRNQ9NPE2 291 aaKnown RBP14.36□□□□□ -0.11
HDAC1-207ENST00000481281 KMT5AQ9NQR1 393 aa14.36□□□□□ -0.11
HDAC1-207ENST00000481281 ODF2LQ9ULJ1 636 aa14.36□□□□□ -0.11
HDAC1-207ENST00000481281 RBM19Q9Y4C8 960 aaKnown RBP14.36□□□□□ -0.11
HDAC1-207ENST00000481281 NCOR1O75376 2440 aa14.35□□□□□ -0.11
HDAC1-207ENST00000481281 FSD2A1L4K1 749 aa14.35□□□□□ -0.11
HDAC1-207ENST00000481281 SFI1A8K8P3 1242 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms