RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 RUSC1Q9BVN2 902 aa10.03□□□□□ -0.8
VCP-206ENST00000480327 POLR3FQ9H1D9 316 aaPredicted RBP10.03□□□□□ -0.8
VCP-206ENST00000480327 KCNH6Q9H252 994 aa10.03□□□□□ -0.8
VCP-206ENST00000480327 GOLPH3LQ9H4A5 285 aa10.03□□□□□ -0.8
VCP-206ENST00000480327 DHX33Q9H6R0 707 aaKnown RBP10.03□□□□□ -0.8
VCP-206ENST00000480327 ST3GAL5Q9UNP4 418 aa10.03□□□□□ -0.8
VCP-206ENST00000480327 TBKBP1A7MCY6 615 aa10.02□□□□□ -0.81
VCP-206ENST00000480327 M0QZ92 97 aa10.02□□□□□ -0.81
VCP-206ENST00000480327 GPR32O75388 356 aa10.02□□□□□ -0.81
VCP-206ENST00000480327 PRPF40AO75400 957 aaKnown RBP10.02□□□□□ -0.81
VCP-206ENST00000480327 FGF18O76093 207 aa10.02□□□□□ -0.81
VCP-206ENST00000480327 RPLP2P05387 115 aaKnown RBP10.02□□□□□ -0.81
VCP-206ENST00000480327 STAG3L1P0CL83 205 aa10.02□□□□□ -0.81
VCP-206ENST00000480327 SRGAP2CP0DJJ0 459 aa10.02□□□□□ -0.81
VCP-206ENST00000480327 FGFR1P11362 822 aa10.02□□□□□ -0.81
VCP-206ENST00000480327 CYP11B2P19099 503 aa10.02□□□□□ -0.81
VCP-206ENST00000480327 IBSPP21815 317 aaPredicted RBP10.02□□□□□ -0.81
VCP-206ENST00000480327 CMA1P23946 247 aa10.02□□□□□ -0.81
VCP-206ENST00000480327 NDUFA8P51970 172 aa10.02□□□□□ -0.81
VCP-206ENST00000480327 SLC12A3P55017 1021 aa10.02□□□□□ -0.81
VCP-206ENST00000480327 NLRP11P59045 1033 aaKnown RBP10.02□□□□□ -0.81
VCP-206ENST00000480327 ZXDAP98168 799 aa10.02□□□□□ -0.81
VCP-206ENST00000480327 DUSP6Q16828 381 aa10.02□□□□□ -0.81
VCP-206ENST00000480327 RINT1Q6NUQ1 792 aa10.02□□□□□ -0.81
VCP-206ENST00000480327 CCDC73Q6ZRK6 1079 aa10.02□□□□□ -0.81
VCP-206ENST00000480327 TRIM67Q6ZTA4 783 aa10.02□□□□□ -0.81
VCP-206ENST00000480327 SYT2Q8N9I0 419 aaPredicted RBP10.02□□□□□ -0.81
VCP-206ENST00000480327 COLGALT1Q8NBJ5 622 aa10.02□□□□□ -0.81
VCP-206ENST00000480327 PRPF31Q8WWY3 499 aaKnown RBP10.02□□□□□ -0.81
VCP-206ENST00000480327 NLRP7Q8WX94 980 aa10.02□□□□□ -0.81
VCP-206ENST00000480327 NLRP4Q96MN2 994 aa10.02□□□□□ -0.81
VCP-206ENST00000480327 ADAM2Q99965 735 aa10.02□□□□□ -0.81
VCP-206ENST00000480327 JPH2Q9BR39 696 aaPredicted RBP10.02□□□□□ -0.81
VCP-206ENST00000480327 TYW1Q9NV66 732 aaKnown RBP10.02□□□□□ -0.81
VCP-206ENST00000480327 SERTAD1Q9UHV2 236 aa10.02□□□□□ -0.81
VCP-206ENST00000480327 CDH22Q9UJ99 828 aa10.02□□□□□ -0.81
VCP-206ENST00000480327 KCNH3Q9ULD8 1083 aa10.02□□□□□ -0.81
VCP-206ENST00000480327 PPME1Q9Y570 386 aa10.02□□□□□ -0.81
VCP-206ENST00000480327 WDR87Q6ZQQ6 2873 aa10.02□□□□□ -0.81
VCP-206ENST00000480327 CACNA1HO95180 2353 aa10.02□□□□□ -0.81
VCP-206ENST00000480327 A0A087WZ62 844 aa10.01□□□□□ -0.81
VCP-206ENST00000480327 A0A1W2PQ27 194 aa10.01□□□□□ -0.81
VCP-206ENST00000480327 A0A1W2PQ64 194 aa10.01□□□□□ -0.81
VCP-206ENST00000480327 A0A1W2PQD8 194 aa10.01□□□□□ -0.81
VCP-206ENST00000480327 TMEM221A6NGB7 291 aa10.01□□□□□ -0.81
VCP-206ENST00000480327 SFI1A8K8P3 1242 aa10.01□□□□□ -0.81
VCP-206ENST00000480327 M0R296 226 aa10.01□□□□□ -0.81
VCP-206ENST00000480327 HIP1RO75146 1068 aa10.01□□□□□ -0.81
VCP-206ENST00000480327 CSDE1O75534 798 aaKnown RBP10.01□□□□□ -0.81
VCP-206ENST00000480327 RPS6KA5O75582 802 aa10.01□□□□□ -0.81
VCP-206ENST00000480327 KRT18P05783 430 aaKnown RBP10.01□□□□□ -0.81
VCP-206ENST00000480327 LAMTOR4Q0VGL1 99 aa10.01□□□□□ -0.81
VCP-206ENST00000480327 TCF15Q12870 199 aa10.01□□□□□ -0.81
VCP-206ENST00000480327 E2F4Q16254 413 aa10.01□□□□□ -0.81
VCP-206ENST00000480327 ARSHQ5FYA8 562 aa10.01□□□□□ -0.81
VCP-206ENST00000480327 SYCE2Q6PIF2 218 aa10.01□□□□□ -0.81
VCP-206ENST00000480327 C1orf186Q6ZWK4 172 aa10.01□□□□□ -0.81
VCP-206ENST00000480327 SLC24A5Q71RS6 500 aa10.01□□□□□ -0.81
VCP-206ENST00000480327 SV2BQ7L1I2 683 aa10.01□□□□□ -0.81
VCP-206ENST00000480327 DYMQ7RTS9 669 aa10.01□□□□□ -0.81
VCP-206ENST00000480327 EXOC8Q8IYI6 725 aa10.01□□□□□ -0.81
VCP-206ENST00000480327 IQUBQ8NA54 791 aa10.01□□□□□ -0.81
VCP-206ENST00000480327 ASAP3Q8TDY4 903 aa10.01□□□□□ -0.81
VCP-206ENST00000480327 TCP11Q8WWU5 503 aa10.01□□□□□ -0.81
VCP-206ENST00000480327 PSPC1Q8WXF1 523 aaKnown RBP10.01□□□□□ -0.81
VCP-206ENST00000480327 MRPS27Q92552 414 aaKnown RBP10.01□□□□□ -0.81
VCP-206ENST00000480327 ASIC4Q96FT7 647 aa10.01□□□□□ -0.81
VCP-206ENST00000480327 CASD1Q96PB1 797 aa10.01□□□□□ -0.81
VCP-206ENST00000480327 OSMRQ99650 979 aa10.01□□□□□ -0.81
VCP-206ENST00000480327 FDXACB1Q9BRP7 624 aaPredicted RBP10.01□□□□□ -0.81
VCP-206ENST00000480327 S1PR5Q9H228 398 aa10.01□□□□□ -0.81
VCP-206ENST00000480327 ADAMTS10Q9H324 1103 aa10.01□□□□□ -0.81
VCP-206ENST00000480327 ZHX3Q9H4I2 956 aa10.01□□□□□ -0.81
VCP-206ENST00000480327 TLE6Q9H808 572 aa10.01□□□□□ -0.81
VCP-206ENST00000480327 TLR9Q9NR96 1032 aa10.01□□□□□ -0.81
VCP-206ENST00000480327 STK17AQ9UEE5 414 aa10.01□□□□□ -0.81
VCP-206ENST00000480327 LRFN2Q9ULH4 789 aa10.01□□□□□ -0.81
VCP-206ENST00000480327 PCDHB7Q9Y5E2 793 aa10.01□□□□□ -0.81
VCP-206ENST00000480327 COL4A3BPQ9Y5P4 624 aa10.01□□□□□ -0.81
VCP-206ENST00000480327 MYMKA6NI61 221 aa10□□□□□ -0.81
VCP-206ENST00000480327 HIDE1A8MVS5 230 aa10□□□□□ -0.81
VCP-206ENST00000480327 GAS2O43903 313 aaKnown RBP10□□□□□ -0.81
VCP-206ENST00000480327 FGFR4P22455 802 aa10□□□□□ -0.81
VCP-206ENST00000480327 GLRA2P23416 452 aa10□□□□□ -0.81
VCP-206ENST00000480327 ARL2P36404 184 aa10□□□□□ -0.81
VCP-206ENST00000480327 PBX3P40426 434 aa10□□□□□ -0.81
VCP-206ENST00000480327 SYKP43405 635 aa10□□□□□ -0.81
VCP-206ENST00000480327 AFMP43652 599 aa10□□□□□ -0.81
VCP-206ENST00000480327 GPC3P51654 580 aa10□□□□□ -0.81
VCP-206ENST00000480327 CRYBB1P53674 252 aaPredicted RBP10□□□□□ -0.81
VCP-206ENST00000480327 VCPP55072 806 aaKnown RBP10□□□□□ -0.81
VCP-206ENST00000480327 UBE3AQ05086 875 aa10□□□□□ -0.81
VCP-206ENST00000480327 LONRF3Q496Y0 759 aa10□□□□□ -0.81
VCP-206ENST00000480327 TMEM184AQ6ZMB5 413 aa10□□□□□ -0.81
VCP-206ENST00000480327 GRAMD1CQ8IYS0 662 aa10□□□□□ -0.81
VCP-206ENST00000480327 KCTD17Q8N5Z5 321 aa10□□□□□ -0.81
VCP-206ENST00000480327 RNF149Q8NC42 400 aa10□□□□□ -0.81
VCP-206ENST00000480327 MCPH1Q8NEM0 835 aa10□□□□□ -0.81
VCP-206ENST00000480327 FEZF2Q8TBJ5 459 aa10□□□□□ -0.81
VCP-206ENST00000480327 BSNDQ8WZ55 320 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms